Cutibacterium acnes subsp. defendens ATCC 11828: TIIST44_08020
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Entry
TIIST44_08020 CDS
T01972
Name
(GenBank) putative exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pad
Cutibacterium acnes subsp. defendens ATCC 11828
Pathway
pad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TIIST44_08020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pad03400
]
TIIST44_08020
Enzymes [BR:
pad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TIIST44_08020
DNA repair and recombination proteins [BR:
pad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TIIST44_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecC_C
Exonuc_V_gamma
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
AER06068
LinkDB
All DBs
Position
complement(1703575..1706724)
Genome browser
AA seq
1049 aa
AA seq
DB search
MAGVVKVVHSWRCVSDAVVAALSEPTTDPFVRPILVAPGNAQSRSLLQSLARRHGIAAGI
DTTTPLGLRERLEEDLLGIKRENDPWQPGPLALRICRIIENNPPGFEVVSAHLEASRRQG
VPRATWTTARQAADAICALARDSHDVLNAWAAGAAPTSHKGDTDLAGDPLDPARAWWAPL
WRTLLAEPCHVPDPVSRHQLLVDAILTQSRSEPPIVWFSSTTTAQHDVSFAEALSASHDV
TIVHLDHGIGGANPWRTFDRARSATTARWTSSSIRTAQSAVTHRKELPTVEIHQCHGVDR
QAEVVRDVVCAALADYPTLEPRDIVVICCGRQDTAHLLSAGTLADINHPAHQLRFTTPPQ
REHVNPVTEAVTTILGLASSRATGQDLLSLCAMPAVRTRFGFSDDDQEAIERLVSQADIR
WGVDPAARNKAGLGRIRQSTWLAGIERMILAIAMSSTPPTYLGTVTPITDVGSTTIPLVG
KLAELVSRMRKAFLDTETPAPIATWKRRVRQIVDNLTAAPADAPRSALQTLALLTGLEGV
AEDREFNRQEIIDLLNWLSGIHRGRHSWFDGSIQVCRPGELTPVDHEVVIVVDPDQETVH
ADLLQGLRDENLDPTAKARQDLLDVALSARTLLVVVRQARSPVSNLTVLRGPFTRTLSQA
LKAQSATPRCVKHGLQPFSADEFSHHSNTAWSGFDNAAAAAAGCHPGSQPRPHRVVLPPV
AKLPESRMSLTDLTLALSHPARTLLRARAGAPANERSTDLPVDLPLAPSSLDKYWIRSRI
LADLEHGSLPDDAINAERLRGSTPPGHLGQRIVTKLAEDAMQIYQRANQLRGDQDEQFIE
IDIDLDEGDSPPLLWPDELIVDPMHPVHLRGRVGVRNHHIVHAVASRANARPLLDLWVDL
LAVTVATDEPGWFGVLVPNGNVLRMASPAPDHARDILAGLARVAWWSNQQLIPLPVKLAH
ALVELSPMAHNDYRTGASALQVQWSRERDPNWAAFLGTDVGELIACCHELGTTLKELSEW
LFDPIKQALRGAGSSPSTMAQFSNSGRRA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtggtgaaggtcgtccattcctggcgctgcgtcagtgacgccgtcgtagca
gctttgtcagagcccaccaccgatccattcgtccggccgattctggttgctcctggcaat
gctcagtctcgatctttgctgcaatccctcgcccgccgtcatggaatcgccgccggtatc
gatacaacaacgccgctgggtctacgagaacgactcgaggaagatctcctgggaatcaag
cgggaaaacgatccgtggcagcccgggcccctggccctgcgtatatgccgcatcattgag
aacaatccccccggttttgaggttgtttcagcccatctggaagccagccgtcggcaagga
gtgccgcgtgcaacatggacaactgcacgacaagctgcagacgcgatctgcgcgctagct
cgcgactctcacgacgtcttgaatgcctgggccgccggtgccgcccccacatctcacaag
ggtgatactgaccttgcgggtgacccgctggatcccgcccgcgcgtggtgggccccgctg
tggcgtacccttcttgccgaaccgtgccatgttccggaccccgtgagccgacaccaactc
ctcgtcgacgcgatacttactcagtcacgatctgaaccgccgatcgtgtggttttcatcg
acaaccacggctcagcacgacgtcagcttcgcggaagcgttgtcggcctcacacgacgtc
actatcgtccatctcgatcatggcattggtggtgcgaatccgtggcggacttttgaccgg
gcgcgctctgccacgaccgcgcgatggacatcatcatcgatccgtacagcgcagagcgcg
gttacccaccgcaaagagctgccaacagtcgaaatacaccaatgccacggagttgatcgt
caggccgaagtagtgcgtgatgttgtgtgcgccgctctcgccgactacccaaccttggaa
cccagggacatcgtcgtcatatgttgcgggcgccaggacaccgcccaccttctttccgct
gggactttggcagatatcaatcaccccgcacatcagttgcggttcacgacccctccgcaa
cgcgagcatgttaatcccgtcaccgaagcggtaacgaccatcttgggcttggcctcctca
cgtgccacgggacaagacttactcagtctgtgcgccatgcctgcggtgcggactcgattc
ggattctccgatgacgaccaggaggcgattgaacggctggtgagccaggccgatatccgg
tggggagttgatcctgccgcaaggaacaaggcagggctgggccggatcagacaatcaacc
tggctggctggcatcgaaaggatgattctcgccatcgcgatgtcgtctacaccaccaact
tatctggggacagttacgccgattactgacgtcggatcgacaacaatccccctcgtcggg
aaactcgctgaactcgtatccagaatgcgcaaggcgttcctcgacactgaaacacccgca
ccgattgccacctggaaacgccgggtcaggcagatcgttgacaaccttaccgccgctccc
gcagacgctcctcgatcggcgctacagactcttgccctgctgacaggcttggaaggggtc
gcagaagacagagagtttaatcgccaggagatcattgacctcctcaactggctctcaggc
atccatcgtgggcggcacagctggttcgatggatcaattcaggtgtgccgtccgggcgag
cttacccccgtcgatcacgaagtcgtgattgtcgtcgaccccgaccaagaaactgttcat
gccgatctcctccaaggtttgcgagatgaaaacctcgatccgactgctaaagcacgacaa
gaccttctcgacgtcgctctgtcggccagaactctcctggtcgtcgtgaggcaggcgcgc
agccctgtgagcaacctcaccgtgttgcggggcccctttacaagaaccctctcccaagct
ctcaaggcgcagtccgcaacaccgcgttgcgttaaacacggtttgcaaccgttctctgcc
gatgaattctctcatcacagtaataccgcttggagtggattcgacaacgccgcggccgca
gcggcagggtgtcatcctggatcacagcctcgacctcatcgcgtcgtattgcccccggta
gccaagttacctgaatcccggatgtcccttaccgacctcactctcgccctgtctcaccca
gcacgaacgctcttgcgagcccgtgctggcgcaccagctaatgaaagatctactgacctg
ccggtcgacctgccacttgcaccaagctcattagacaaatactggatacgttcccggatc
ctggctgacctggaacacggttctctgccagacgacgccatcaatgccgaacgactccgc
ggctctactcctccagggcacctgggccaacgcatcgtcaccaaattggctgaggatgcg
atgcagatttatcaaagggccaatcagctccgcggcgaccaagacgagcagttcatcgaa
attgatatcgatctcgatgagggtgacagccccccattgctatggcctgacgaactcatt
gtcgatcccatgcacccggttcacctgcgtggtcgagtcggtgtgaggaaccatcatatt
gtccacgctgtcgcgtcccgggcgaatgctagaccgctcctcgacctgtgggtcgatctg
ctcgctgtgaccgtcgccactgacgaacccggatggtttggagtccttgtcccgaacggc
aacgtcctgcggatggcttccccagcgccggatcatgctcgcgacatcctggctgggctc
gcccgagtcgcctggtggagcaaccagcaactcatcccgttgcctgtgaaattggcacac
gcgctcgtcgagttgtcccccatggcgcataacgactatcgcaccggagccagcgccctc
caagtgcagtggtcgcgagagcgggatccaaactgggcggcatttttgggaaccgatgtg
ggtgagctcatcgcctgctgccatgagttaggtaccaccttgaaggaactttccgaatgg
cttttcgacccgattaagcaggcgttgagaggggctgggtcttcaccctcgacgatggca
cagttttcgaattcggggaggagggcatga
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integrated database retrieval system