Cutibacterium acnes subsp. defendens ATCC 11828: TIIST44_08025
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Entry
TIIST44_08025 CDS
T01972
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pad
Cutibacterium acnes subsp. defendens ATCC 11828
Pathway
pad03420
Nucleotide excision repair
pad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TIIST44_08025
03430 Mismatch repair
TIIST44_08025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pad03400
]
TIIST44_08025
Enzymes [BR:
pad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TIIST44_08025
DNA repair and recombination proteins [BR:
pad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TIIST44_08025
MMR (mismatch excision repair)
Other MMR factors
TIIST44_08025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
HHH
DUF3263
Motif
Other DBs
NCBI-ProteinID:
AER06069
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All DBs
Position
1706849..1708969
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AA seq
706 aa
AA seq
DB search
MLLSVTTLMVIAVRTRTADAILAALDPEQVKVAKTFDVPVCVIAGAGTGKTRAVTHRIAY
GAATGKLDPRRTLAVTFTTKAAGTMRGRLADLGVVGVQARTIHSAALRQIKFFWPRAYNC
ELPPVSDSRFSMVAEATHRIGLGNDKALLRDLSAEISWAKVSNVPTDQYASLARAEGRVV
AGVSATDVGRVLAGYEAVKRERCVIDLDDILLCAVGLLVQHRDITEEIRARYRHFVVDEY
QDVSPLQHRLLELWFGDRNDVCVVGDPHQAIHSYAGARADYLLNFVADHPGAKRIDLVRN
YRSTPEIVQLANEVLVNRMTPEEALEHGRGVTLVSRGRSGPEPIYQALGDDASEASAVAM
WIESRHAAGIPWSEIAVLYRINSQAAQLETALAERSIPYLVKGSERFYDRGEVRRSLDAL
ARLAADEPGADPLRAFDRILAAQGWSAIAPEGEGDVRQRWESLQALHDLTVSVVDDGTRT
LEQLAAVFSRRAATQEAPVGDGVTLATLHASKGLEWDVVALYGINDTMVPFIMAEAPAEV
ASERRLLHVGVTRARRDLWVSYSWSGGNRDRQGISRFLRGLPGTGEMTDNPPRHRRKRRA
TITVCSVCGKALTAARDRKLGHHLACEVGVDPVLVERLRQWRSERAEADRVPAFVILTDA
TLLGVAEKRPNSMESLLQVPGIGKRKADLYAADLIKVLHGSSDNQQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgtcggtcacgacccttatggtgatcgctgtgagaacccgaacggcagatgcg
attctggcggcactggatcctgaacaggtcaaggttgcgaagaccttcgatgttccagtg
tgcgtcatagctggtgccgggacaggtaaaactcgtgctgtcactcatcgcattgcctac
ggtgcagcgacaggcaagcttgatccgcgtcgtaccctcgcggtcacttttacgactaag
gcagctggcacgatgagaggtcgactcgctgatcttggggttgttggtgtgcaggctcgc
actattcattctgcggcgttgcggcagatcaagtttttctggcctcgtgcatataactgt
gagttgccaccggtgagtgattctcgtttctcgatggtggcggaggcgacccatcgcatt
ggtctgggcaatgacaaggcgctgctgcgcgacttgtccgccgagatctcgtgggcgaag
gtctcaaatgtgccgactgatcaatacgcatccctggctagggcggaaggtcgggtggtg
gcgggagtttcggcaactgacgtaggacgcgtcctcgctggatatgaggctgtgaagagg
gaacgctgcgtcattgatctggacgatattttgttgtgcgcggtgggattgctggttcag
caccgtgacatcactgaggagattcgggctcggtaccgacatttcgttgtcgacgagtac
caggacgtttctccgctgcagcataggttgcttgagctgtggtttggcgatcgaaatgat
gtatgcgtcgtgggagatccgcaccaggccattcactcttatgcaggtgcgcgagctgac
tacctcctcaacttcgttgccgatcatcctggcgctaaacgcatcgatttggttcgcaac
taccgctctacccccgagatcgttcagttggccaatgaagttcttgtcaaccgtatgact
ccagaggaggctctggaacatggcaggggagttacattggtttcgcggggacggtccggt
cccgagcccatctatcaggctctcggggacgatgcctccgaagcttcagctgtagcaatg
tggattgaatcgcgccatgctgcgggaatcccatggtctgagattgccgtcttgtaccgg
attaattctcaggcagcccagcttgagaccgcgctggccgagaggtccatcccatatctt
gtgaagggttctgagcgcttctatgaccggggcgaagtgcgacgcagccttgacgctttg
gctcggcttgctgctgatgaaccaggtgcggatccgctacgggcttttgatcggatactc
gcagctcaaggttggtcggctatcgcgcccgagggagaaggtgatgtccggcaacggtgg
gaatcgttgcaagctttgcacgatctgacggtctcggttgtagacgacgggacgaggacg
ctggaacaactggcagccgtgttctcccgtcgggcggccactcaggaggcgccggtcggc
gacggcgttaccttggcaaccttgcatgcatctaaagggctcgaatgggatgtcgtggcc
ctctatggcatcaatgacacgatggtgcccttcatcatggctgaagctccggctgaggtg
gcttcggaacgccggttgttgcatgttggcgtaactcgagcacgacgagacctgtgggtc
tcgtactcgtggtctggagggaaccgggaccggcaggggatctcgcgatttttgcgcggc
ctccctgggacgggggaaatgaccgacaaccccccgcgacatcgccggaaacgtcgtgcc
acgatcacagtctgctcggtgtgcggcaaagcccttacggcggccagagaccgaaaactc
ggccatcaccttgcctgcgaggtgggggtcgacccagttctcgtcgagaggttgcggcag
tggcgcagcgaacgcgcggaagccgatcgagtgccagctttcgtcattctcacggacgct
accttgctgggcgtggcggagaaacgacctaactctatggaaagtttattgcaggtcccc
ggaattggtaagcgcaaggccgatctttacgcggctgatctcatcaaggtgctgcacggt
tcctcggataaccaacagtga
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