Cutibacterium acnes subsp. defendens ATCC 11828: TIIST44_08325
Help
Entry
TIIST44_08325 CDS
T01972
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pad
Cutibacterium acnes subsp. defendens ATCC 11828
Pathway
pad00300
Lysine biosynthesis
pad00470
D-Amino acid metabolism
pad01100
Metabolic pathways
pad01110
Biosynthesis of secondary metabolites
pad01120
Microbial metabolism in diverse environments
pad01230
Biosynthesis of amino acids
Module
pad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TIIST44_08325
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TIIST44_08325
Enzymes [BR:
pad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TIIST44_08325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Se_S_carrier
Motif
Other DBs
NCBI-ProteinID:
AER06129
LinkDB
All DBs
Position
1764445..1765875
Genome browser
AA seq
476 aa
AA seq
DB search
MTHMHVAGSVHADVAAAGPQWLTLPDDVNALDPALWSASTDRDDDGIVEVAGVTVTELLS
QYGSPLYVLDESDLRQRARAFRDAFSEWDVYYAGKAFLTRTIASWIDQEGLFLDTCTGGE
LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR
VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ
IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE
IVTVEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD
NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG
AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLALDPGPIRAEVPCP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacatgcacgttgccggctcggtccacgccgacgtcgcagctgccggtccgcag
tggctgaccttgcctgatgacgttaacgcattggaccctgcgctctggtcagcatcgact
gatcgtgatgacgatggaatcgttgaggtggccggggtgaccgtcaccgagctgttgtcg
caatacggatcgcctctgtacgtgcttgacgagtccgacctccggcagcgggcacgggcc
ttccgtgacgctttttccgagtgggacgtctactacgccgggaaagcttttttgacccgc
acgatcgcctcatggattgaccaggagggtctgttcctagatacatgcaccggcggcgag
ctcataacagccctgcaaggtgggatggatcctgcccggatcgggttgcacgggaataac
aagtcaattgacgagcttaaattggctcttagcgtcggagtcgggcggatcatcgtcgac
tccctagatgaaatcatgcgcatcgagcaattgtgtcgggaaaacggctggcatgcccgc
gtcatggtacgagtaactgcaggtgtcgaagcgcatactcatgaatacattgccactgcc
cacgaggatcaaaaatttggtttctcaattaccaatggcgccgcgatggttgccatggtg
aggtgccacaccagtgacgccatcgacctgctaggcgtccactcccacatcggttctcag
atcttcgataccgctggtttcgaggtggcggctcgtcgcactatgaagcttctcgagcag
ttccatcaggccaccgggagcgccctccccgaactcgaccttggcggtgggttcggtatt
gcctacaccagtcaagattctccggccaccgtcgaaagcttagctggggcccttcgcgag
atcgtcaccgttgaagcccggggaaggggtatggaggttccccatatttctctggagccc
ggccgtgccattgtagggccgacgacgatggccctatacaccgtcggcaccgtgaaacca
gtcgacctggatactggtgcccagcgaatgtacgtctccgtcgatggcgggatgagcgac
aatattcgccctgccctgtacgctgcagagtactcggctgttatcgccaaccggacttcg
gaagtggcgccggtgctgtgccgcattgtgggcaagcactgtgaggccggagacatcttg
gtgcgcgacgtctacctgcccggtgatgtctccccaggggatgtcatagcggtgcccgga
gccggggcctactcaaggtcgatggcttccaactataaccatgtaccgcgtccggcggtc
gtgagcgtcaacgaggaccggggtgtgttggtgctgttgcgccgggagaacatcgacgac
ctccttgctctcgatccagggccgatccgtgccgaggtgccatgcccgtaa
DBGET
integrated database retrieval system