Cutibacterium acnes subsp. defendens ATCC 11828: TIIST44_08885
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Entry
TIIST44_08885 CDS
T01972
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pad
Cutibacterium acnes subsp. defendens ATCC 11828
Pathway
pad03030
DNA replication
pad03430
Mismatch repair
pad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TIIST44_08885 (dnaE)
03430 Mismatch repair
TIIST44_08885 (dnaE)
03440 Homologous recombination
TIIST44_08885 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pad03032
]
TIIST44_08885 (dnaE)
03400 DNA repair and recombination proteins [BR:
pad03400
]
TIIST44_08885 (dnaE)
Enzymes [BR:
pad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TIIST44_08885 (dnaE)
DNA replication proteins [BR:
pad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TIIST44_08885 (dnaE)
DNA repair and recombination proteins [BR:
pad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TIIST44_08885 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AER06239
LinkDB
All DBs
Position
complement(1876084..1879656)
Genome browser
AA seq
1190 aa
AA seq
DB search
MARSDFVHLHTHTEYSMLDGAASNEKLFAEVARQGMPAVAMTDHGNMFGAYEFFQISKKY
DGDQNPLVKPIIGIEAYVAPSTRKSRVQEFWGTSRDAGDPDAEGGKDVSGGGRYTHMTMW
AKDSEGLHNLFRLSSLASYEGYYMKPRMDRELMGQYPGGIIASTGCPSGEVQTRLRLGQF
EEACQAASDYRDIFGRENYFCELMDHGVPIEKQVRSDLLKLAKKLDIPLLVTNDSHYVTE
DQADAHDSLLCVGVGRNKDDPNRFRFNGSGYYIKSSEQMRALFPDHPEACDNTLLLTEMI
GSYDEVFKYVDRMPQFDVPEGETQESWLRKKLQEGLDEKFGPNPPKEVLERLETELSVIE
PLGFASYFLVVSDICNAARSMGVPVGPGRGSAAGSLVAYLTGIIAINPLEHGLLFERFLN
PERVNPPDIDLDFDDRQRDKVIDYVTHKYGAEYTSQVNTFGKIKAKAAVKDANRILGYPF
ALGDKITKAMPPDVMGKGVPLDKIFDSSHERYGEGQEFRQLVADNPDVAKVVETAKGLEG
LIRGTGVHACAFILSSTPLLDLVPMHKRDKDGMIIAGFAYPQLEEMGLMKMDFLGLRNLG
IMDHCIKIIKANRGIDVDLKNIALDDKTTYEMLARGDTLGVFQLDGTAMRSLLRLMGPTC
FDDIVAVLALYRPGPMGANAHISYAQRKNNREPIIPIHPELKEDLDEILAPTYHLIVYQE
QIMSIARKLAGYTLGGADLLRRAMGKKKKHILEENFIPFQAGMREHGYSDDAIQTLWDVM
VPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYGAALLTSVGDDKDKMAMYLADMRAQH
INVLPPDVNASSLEFTAVGEDIRFGLGAVRNVGANAVAEIIRAREENGPAPDFFTFLDQV
SLTVCNKRLIESLIKAGAFDSMGHSRRGLMAVYGQAVDAVIDIKRNQANGQDDLFGMGDD
SQPTQMGVERVVPDDDWDRSTKLAFEREMLGLYVSDHPLRGLEAALEAESDISVAELVNP
EGHHEGRYTVVGMVTQIVRRTTKNGDIWASVTLEDLDASITIACFPKVYQRVEPLLAVDS
ILKVRGFVRERDETVEMSANDIWLLDLTDASKAPMTIDMRRGRCTRGTLEELRGVLRNHP
GSSEVRLRLIDGKVTTTFRLADELKVTQGQPLMADLKALLGPSCVPRRQQ
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgttccgacttcgtccacctccacacccacaccgaatactcgatgctggacggc
gctgccagcaacgagaaacttttcgccgaggtggcacgtcaagggatgcctgcggtcgcg
atgaccgaccacggaaatatgttcggtgcctacgagttcttccagatttccaagaagtac
gacggggaccagaatcctctcgttaagccgatcattggtatcgaggcgtacgtcgctccg
agtacccgcaagtcacgagtacaggaattctgggggacctcgcgtgatgcaggagatccg
gatgccgagggcggcaaagacgtctctggcggcggtcggtacacccatatgacgatgtgg
gcgaaggattccgaaggcctgcacaaccttttccgactctcgtccttggcgtcctatgag
ggctactacatgaaaccgcgtatggaccgcgagctcatgggccagtaccccggtggcatc
atcgcctcaaccggctgcccatcgggtgaggtgcagacccggctgcgcctcggccagttt
gaggaagcttgccaagctgcatccgattatcgggacatctttggccgtgaaaactatttt
tgtgagttgatggaccacggcgtcccaatcgaaaagcaggtgagatccgacctgctgaag
ctggccaaaaaactagacattccgttgctggtcaccaacgactcccactacgtcactgag
gatcaggccgacgcccacgactctttgctgtgtgtcggtgtgggccgaaacaaagatgat
ccgaaccggttccggttcaacggttccggctactacatcaaatcctcggagcagatgcgg
gcgctgttccccgaccatccggaggcctgtgacaacaccttgctgctgaccgagatgatt
ggttcctatgacgaggtgttcaagtacgtcgaccggatgccgcagttcgatgttcctgag
ggggagactcaggagtcctggctgcgtaagaaactccaggaaggacttgacgagaaattc
ggtccgaacccacccaaagaggtcctagagcgtctcgagactgagctgtcggtcatcgaa
ccgctgggattcgcctcgtacttcctcgttgtctccgatatttgcaacgcggcacgttcg
atgggggtaccggtagggcccggacgtggttcggcggctggttccctggttgcctacctg
accggcattatcgcgatcaacccgctggaacacggtctactgttcgagaggttcctcaac
ccggagcgcgtcaatccgcccgatatcgaccttgacttcgacgatcgtcagcgtgacaag
gtcattgattacgtcacgcacaagtacggggccgagtacaccagccaggtcaacaccttc
ggcaagattaaggcgaaggccgctgtgaaagacgctaaccgtattctcggctatcccttc
gccctcggcgacaagatcaccaaggcaatgcccccggacgtgatgggcaagggcgttcca
ctggacaagatcttcgactcctcccacgagaggtatggcgaaggccaggagttccgtcag
ctggtggcagataaccctgacgtagccaaggttgtcgagactgccaaaggcctcgagggg
ctgattcgaggcaccggcgtgcatgcctgcgcgttcatcctgtcgagtaccccgctgctt
gacctcgtgccgatgcacaagcgcgataaggacggcatgatcattgccggcttcgcgtac
ccccagctcgaggagatggggctcatgaagatggatttcctgggcctgcgcaacctcggc
atcatggatcattgtatcaagatcatcaaggccaaccgggggattgatgtcgatctcaaa
aacatcgcccttgatgacaagacaacctacgagatgctggcgcgcggcgacaccctaggc
gtcttccagcttgatggcacggccatgaggtcgttgctgcggctcatgggtccgacatgc
ttcgacgacattgttgccgtgctagccctgtatcgcccgggccctatgggcgctaatgcg
catatctcttatgctcagcgtaagaacaaccgggaaccgatcattccgatccatcccgaa
ctcaaggaggacctcgacgagatccttgctcccacgtaccacctcattgtgtaccaggag
cagatcatgtcgatcgcccgaaaacttgccgggtataccctgggtggcgccgacctgttg
cgccgagcgatgggtaagaaaaagaagcacatcctggaggaaaacttcatccccttccag
gcgggtatgcgtgaacacggttactccgacgatgccatccagactttgtgggacgtcatg
gtccccttcgctggatacgcctttaacaaatcccacgctgctggctatggacttgtctcg
tactggacggcttacctcaaggccaactacccggctgaatacggcgctgctctgctgacg
agcgtcggtgacgataaagacaagatggcaatgtacctagctgacatgcgcgcccagcac
atcaacgtccttcctcccgacgtcaacgcatcctcccttgagttcaccgctgtcggtgag
gacattcggttcggcctgggggccgtccgaaatgtcggggccaatgcggtagctgagatt
attcgcgcccgggaggagaacggtccagcccccgacttcttcaccttcctcgatcaggtt
agcttgacagtatgcaataagagactcatcgagtccctcattaaggctggcgctttcgac
tctatgggtcactctcgacgtgggcttatggctgtctacgggcaggccgtcgacgccgtc
atcgacatcaagcgcaaccaagccaacggtcaagacgatctattcggcatgggggatgat
tcccagcccactcagatgggggtcgagagggtcgttcccgacgacgattgggatcgcagt
accaaactcgccttcgagcgcgagatgctcggtctctatgtgtcggaccacccgctgcgt
gggctcgaggctgctctggaggccgaatcagatatttcggtggcggaactcgttaatcct
gagggccatcacgagggccggtataccgtggtcggcatggtcacccagatcgtgcggcgt
acgactaagaacggtgacatttgggcctcagtaaccctggaggaccttgatgcgtccatc
accatcgcctgtttcccaaaggtttatcagcgagtggaacccttgctagcggtggacagc
atcctgaaggtacgcggcttcgtccgggaacgcgacgagacggttgaaatgtcggccaac
gacatctggttgcttgatctcactgacgctagcaaggcaccaatgacgatcgatatgcgt
cgcggacgctgcacccgtggcacgcttgaagagctgcgcggggtgctgcgcaaccatccg
ggtagttccgaggtgaggttgcggctcattgacggcaaagtgacaacaacattccggctt
gccgacgaacttaaagtcacccaaggtcagccgctcatggcggacctcaaggctttgctt
ggcccgtcgtgcgtcccaaggaggcagcagtga
DBGET
integrated database retrieval system
