Cutibacterium acnes subsp. defendens ATCC 11828: TIIST44_09460
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Entry
TIIST44_09460 CDS
T01972
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pad
Cutibacterium acnes subsp. defendens ATCC 11828
Brite
KEGG Orthology (KO) [BR:
pad00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TIIST44_09460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pad03021
]
TIIST44_09460
Transcription machinery [BR:
pad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TIIST44_09460
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AER06352
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All DBs
Position
complement(2005383..2006915)
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AA seq
510 aa
AA seq
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MSTTTSSTANTAADEEAKTATARKSTRSTSAKTGTTGRAKKTTATKATTKASQSSAHKSA
GGAKAPTAKSSGAKTTTKPTSTKTAAKSTKTAASKTTKSSGTKTVGNVSSGGAKKSTTKR
RTTKAKKETTVAEAASGEVDVTVERDGDDVVLTIGGKKRSLDDVDERDYDPAEAAKDEQQ
INKETEAFSLSDNDDADEPEQTVMVAGATADPVKDYLKQIGKVALLNAVEEVDLAKRIEA
GLFAGEQLADPDAKIREKDREDYEWIAEDGKVAKNHLLEANLRLVVSLAKRYTGRGMLFL
DLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVEVINK
LARVQRQMLQDLGREPTPEELANELDMTAEKVIEVQKYGREPISLHTPLGEDGDSEFGDL
IEDSEAIVPADAVNFTLLQEQLHDVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGV
TRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaccaccacgtccagcactgcaaacaccgctgcagacgaggaggcgaagacagcc
accgcgaggaagagtacacgttccacctctgctaagaccggtacgaccggtcgggcgaag
aagactactgcgacgaaggccacgacgaaggcaagccagtcgtcggctcacaagtccgct
ggtggggccaaggctcccacggctaagtcatctggggccaaaaccacgacgaagcccacc
agcactaagacggccgcgaagtccaccaagacagcggcgagtaagacgacgaagtcttcg
ggtacgaagactgttggaaacgtgtcgtccggtggtgccaaaaagtcgacaactaagagg
cggaccactaaggcgaagaaggaaacgaccgtcgctgaagccgcatccggtgaggtcgat
gtgaccgtggagcgcgacggtgacgacgttgtgctgactattggcggcaagaagcgctcc
ctcgacgatgttgacgagcgtgactacgacccggccgaggctgctaaggacgagcagcag
atcaacaaggagaccgaggcgttctccttgtctgataacgatgacgctgacgagcccgag
cagaccgtcatggtcgccggcgctaccgcagatcccgttaaggattaccttaagcagatc
ggcaaagtagctctgctcaatgccgtcgaagaggttgatctcgccaagcgcattgaggcc
ggtctgtttgccggcgagcagctagccgacccggatgccaagatccgggagaaggaccgc
gaggattacgagtggatcgccgaggacggcaaggtagcgaagaaccacctattggaggcc
aacctccgtctggtcgtctccttggctaagcgttacaccggtcgcggcatgctcttcctt
gacctcattcaggagggcaacctcggtctcattcgtgccgtcgagaaattcgactacacc
aagggctacaaattctccacgtacgcgacgtggtggatcaagcaggccattacccgcgcc
atggccgaccaggctcgtactattcgtatccctgtgcatatggtcgaggtcatcaacaag
ctggctcgcgtccagcgtcagatgctccaggacctaggtcgtgagcccaccccggaagag
cttgccaacgaactcgatatgaccgcagagaaggtcattgaggtgcagaaatacggtcgc
gagccgatctcgctgcataccccactgggtgaggatggcgattctgagttcggtgacctt
attgaggattccgaggccatcgtgccagcagacgccgtcaacttcaccctgttgcaggag
cagctgcatgatgtcctcgataccttgtccgagcgagaggccggtgtcgtgtcgatgcga
ttcggcttgaccgacggacagcccaagaccctggatgagatcggcaaagtctacggtgtt
actcgggagcgcatccgccagatcgagtccaagaccatgtcgaagctgcgtcatccgagt
cgctctcaggtactgcgcgactacctcgactga
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