Paraburkholderia sp. DD10: ACOCG7_23560
Help
Entry
ACOCG7_23560 CDS
T11777
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
padd Paraburkholderia sp. DD10
Brite
KEGG Orthology (KO) [BR:
padd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
padd03016
]
ACOCG7_23560 (truB)
Enzymes [BR:
padd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACOCG7_23560 (truB)
Transfer RNA biogenesis [BR:
padd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACOCG7_23560 (truB)
Prokaryotic type
ACOCG7_23560 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
XQP54343
LinkDB
All DBs
Position
1:complement(1849878..1850831)
Genome browser
AA seq
317 aa
AA seq
DB search
MTAPQRPRVPRRALDGVLLLDKPLGLSSNDALIRAKRLYLAKKAGHTGTLDPLATGLLPL
CFGEATKFSQDLLEADKTYEATMRLGIRTTTGDAEGEAIDTREVTCDQAAVLAALPTFLG
DIIQVPPMYSALKRDGKPLYEYARAGQTVEREGRQVTIHALELLACALPDVTFRVTCSKG
TYVRTLAEDIGEALGCGAHLVALRRTGVGALTLEHAVTLDALSNAPESERDAWLQPVDAL
LSTFPLVRLDEDATRRFLHGQRLKLSELAITGDAVNAPRVRVYDAEGRLLGVAKQGEGVL
APERLVVTTSSQAALKR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacctcaacgtccccgcgtgccgcgtcgcgcgctcgacggcgtgctgctgctc
gacaagccgctcggcctgtcgagcaacgacgcgctgattcgcgcgaaacgtctctatctg
gcgaaaaaggcgggccacaccggcacgctcgacccgctcgccaccggcttgctgccgctg
tgcttcggcgaagccaccaagttctcgcaggatctgctcgaagccgacaagacctacgag
gccacgatgcgcctcggcattcgcacgaccaccggcgacgccgaaggcgaggccatcgac
acacgcgaggtgacgtgcgatcaggcggcggtccttgcggctttgccgacgtttctcggc
gacatcatccaggttccgccgatgtattcggcgctcaagcgcgacggcaagccgctgtac
gaatacgcgcgcgccggtcagacggtcgaacgggaagggcggcaggtgacgatccacgcg
ctcgaattgctcgcctgcgcgctgccggacgtgacctttcgcgtgacgtgcagcaagggc
acgtatgtgcgcacgctcgccgaggacatcggcgaagcgttgggttgcggcgcgcatctg
gtggcgttgcggcgcaccggcgtcggcgcgctgacgctggaacatgcggtgacgctcgat
gctctgtcgaacgcgccggaaagcgagcgggacgcgtggctgcaaccggtcgacgcgctg
ctgtccacgttcccgctcgtcaggctggatgaggacgcgactcgccgctttctgcacggt
caacgcctgaagctgtcggagttggcgatcaccggcgacgcggtgaatgcgccgcgcgtg
cgtgtgtatgacgcggaaggccgcctgctcggtgtcgcgaaacaaggcgaaggcgtgctc
gcaccggaacggctggtggtgacgacgtcgagccaggccgcgctaaagcgctag
DBGET
integrated database retrieval system
