Paraburkholderia sp. DD10: ACOCG7_31315
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Entry
ACOCG7_31315 CDS
T11777
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
padd Paraburkholderia sp. DD10
Pathway
padd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
padd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACOCG7_31315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
padd03400
]
ACOCG7_31315
Enzymes [BR:
padd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACOCG7_31315
DNA repair and recombination proteins [BR:
padd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACOCG7_31315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
XQP52406
LinkDB
All DBs
Position
1:3521180..3521959
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AA seq
259 aa
AA seq
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MLRVITANLNGIRSAAKKGFFEWFGEQQADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH
AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFGKLSVISVYVPSGSSGDERQ
QAKYRFMDEFMPHLAELTREREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTR
LFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKRTDVFRD
IKFSDHAPLTVDYDHQIDK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgtgattaccgccaacctgaacggcatccgctcagcggccaagaagggcttt
ttcgagtggttcggcgagcagcaggccgacgtgctgtgcgtgcaggaaatcaaatgctcg
caggacgatatgacgccggaattcatggcgccgcacgatttcaccggctacttccagcat
gcggtgaaaaaaggctatagcggcgcgggcgtgtacacccgccatgagccggacgaagtg
gtgatcggtttcggcagcgaggagttcgacccggaagggcgctatgtcgaattgcgtttc
ggcaagctgtcggtgatctcggtgtatgtgccgtcggggtcgagcggtgacgagcgtcag
caggccaagtaccgtttcatggacgaattcatgccgcatctcgctgaactcaccagggag
cgcgaggtgatcgtgtgcggcgacgtgaacatcgtccacaaggaaatcgacatcaagaac
tggaagagcaaccagaagaactcaggctgcctgccggaagagcgcgcatggctgaccagg
ctgttcgacgaagtgggttacgtcgacgtgttccgcacgctcgaccagcggccggagcag
tacacgtggtggagcaatcgcggccaggcttatgcgaagaacgttgggtggcggatcgat
tatcagatcgcgacgccgggcatcgcgagcaaggcgaagcgcaccgacgtgtttcgcgac
atcaagttcagcgaccatgcgccgctgaccgtcgattacgatcaccagatcgacaagtag
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