Candidatus Pseudomonas adelgestsugas: C3B55_00075
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Entry
C3B55_00075 CDS
T05857
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C3B55_00075 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pade03400
]
C3B55_00075 (mutM)
Enzymes [BR:
pade01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C3B55_00075 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C3B55_00075 (mutM)
DNA repair and recombination proteins [BR:
pade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C3B55_00075 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QAX81447
LinkDB
All DBs
Position
134815..135627
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AA seq
270 aa
AA seq
DB search
MPELPEVEITRRGIAPHLEGYRISRVVVREWRLRWPIPKDLDMRLSGLRIMLVERRAKYL
LINTENGTLITHLGMSGNLRLVKAGLPALKHEHVDIELESGLALRYTDPRRFGAMLWSQA
PLNHKLLICLGPEPLTDLFDGERLFQFSRGKSIAVKPFIMDSKVVVGIGNIYATETLFAA
GIDPRRVAGSISRMRYLRLALEIKRILTTAIEYGGTTLRNFLSSNGQPGYFKQELLVYGR
GGEACKVCGGELRNIALEQRASVFCRTCQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagttgaaattacacggcgcgggattgcgccacacctcgaagga
tatcgtattagtcgtgtagtagtacgtgagtggcgtttacgctggcctattcccaaagat
ctagatatgcgcctgtctggactacgcattatgctagtagagcgacgtgctaaatacctt
ttaatcaataccgaaaatggcaccttaattacccatttgggtatgtctggtaatttacgt
cttgtaaaggctggtttaccagcactcaagcatgagcatgtagacatcgaactagaatct
ggcctagctctgcgttatactgaccctcgccgctttggtgcaatgctatggagtcaggcc
ccgctcaatcataagctgcttatatgtttaggcccggaaccattgaccgacctgtttgat
ggtgagcgcttgtttcagttttcgcgtggcaagtcgatagcggtgaagccatttattatg
gatagcaaggttgtggtgggtataggtaacatttatgcgacggaaacattatttgcagct
gggattgatccacgtcgggttgctggtagtatttcgcgtatgcgctatttaaggttagcg
cttgaaatcaagcgcatattaacgactgctattgagtatggcggcactacattgcgcaac
tttctcagtagtaatggacaacctggttatttcaagcaggaactattagtctacggtcgt
ggaggtgaagcatgcaaagtttgtggtggcgagttacgaaatatagctctagagcagagg
gctagtgtattttgccgtacatgccaaagttga
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