Candidatus Pseudomonas adelgestsugas: C3B55_00303
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Entry
C3B55_00303 CDS
T05857
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C3B55_00303 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pade03021
]
C3B55_00303 (rpoA)
03400 DNA repair and recombination proteins [BR:
pade03400
]
C3B55_00303 (rpoA)
Enzymes [BR:
pade01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C3B55_00303 (rpoA)
Transcription machinery [BR:
pade03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C3B55_00303 (rpoA)
DNA repair and recombination proteins [BR:
pade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C3B55_00303 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QAX81658
UniProt:
A0ABX5R8P8
LinkDB
All DBs
Position
505481..506482
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSLTRAKITLEPLERGFGHTLGNALRRILLSSMPGSAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKCHGRNEVTLTLSKKGAGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTIARGRGYEPADLRQSDEDESRKIGRLQLDSSFSPVR
RIAYVVENTRVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKCDSELV
VIEQEDQIDPLLLRPIDDLELTVRSANCLKAENIYYIGDLIQRTEGELLKTPNLGKKSLT
EIKDVLASRGLSLGMLLDNWPPTSLKKDDKLIS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgaattcctaacacctcgccacattgatgtgcaggttgttagc
ttaacccgcgctaaaatcacgctcgagcctcttgagcgtggctttggtcataccctggga
aacgctttacgccgcatcctgctatcctcaatgcctggctctgcagtagttgaggcagag
attgacggtgtactccatgagtacagcgctattgaaggtgtacaggaagacgtaattgaa
atcctgttgaatcttaaaggtttagctattaaatgtcacggccgtaacgaagttacattg
accctatcaaagaaaggagccggagtagttaccgcagctgatatccagctggatcatgat
gttgagattgttaatccggatcacgtaattgctaacttagcgtctaatggcgccttaaac
atgaagctcaccatagctcgtggccgcggttatgagccagccgacttgcgccagagtgat
gaagacgagagccgtaaaattggcagactacagcttgactcttcgtttagcccggttcgc
cgtattgcatatgtggtggaaaatacccgtgttgagcagcgtactaatttagataaacta
gttattgatctagaaactaacggtaccctcgatcctgaagaggctatccgccgcgctgca
actattttgcagcagcagttggctgcatttgtcgatctaaaatgtgatagtgaactagtg
gtaattgagcaagaagaccaaattgatccgctcctgcttcgtccgattgatgatttagaa
ttgactgtacgctcagctaactgccttaaggccgaaaatatatactacattggagactta
attcagcgtaccgaaggagaactattgaagactccaaacttaggtaaaaaatccttgact
gaaatcaaagatgttttagcttcccgcggtttgtctctgggtatgctccttgataactgg
ccgcctacaagtcttaaaaaagacgataagttgatttcttaa
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