Candidatus Pseudomonas adelgestsugas: C3B55_00317
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Entry
C3B55_00317 CDS
T05857
Symbol
ispA
Name
(GenBank) Farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade00900
Terpenoid backbone biosynthesis
pade01100
Metabolic pathways
pade01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
C3B55_00317 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pade01006
]
C3B55_00317 (ispA)
Enzymes [BR:
pade01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
C3B55_00317 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
C3B55_00317 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
C3B55_00317 (ispA)
Prenyltransferases [BR:
pade01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
C3B55_00317 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QAX81672
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All DBs
Position
complement(536775..537662)
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AA seq
295 aa
AA seq
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MIDAYQASSQARVNAALEPLFVAPSPEMNRLYEIMRYSVMNGGKRIRPSLAYAACEALGA
PAELANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTPHKAFDEAYAILAGDGLQSLA
FSALLDPRLNSANAEISMRMVTTLALAAGPAGMVGGQAIDMNSINLKPDRQALEHMHRHK
TGALIEATTHLGALASGCAETTQLMALQAYSQAIGLAFQVQDDILDIESHTAILGKRQGA
DIARNKLTYPMLLGLEAAKVYVLELRDQALDALISFDAAAESLRSLARYIVARRY
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcgtatcaagctagcagccaggctcgagtaaatgcagctcttgaaccactg
tttgttgcgccaagcccagaaatgaatcgcctgtatgaaataatgcgatacagtgtgatg
aatggcggtaagcgtatacgtccatcactggcttatgcagcatgtgaggccttgggtgcg
ccagctgagcttgctaacggcgcagcttgtgcggtagagttgattcacgcctattccttg
gtacatgacgatttgccagcaatggatgacgatgatttacgtcgtggccaacctacccct
cataaagcttttgatgaagcatatgcaatcttggccggtgacggcttgcagagcctagct
ttcagcgccttgctagatccgcgcttaaatagtgcaaatgccgagattagcatgcgcatg
gttacgacactagcactggctgcagggccagccggcatggttggcgggcaagcaattgat
atgaattcaataaaccttaagccagatcgacaagccttagaacatatgcaccgccataaa
actggcgcgctaattgaagctactacgcatttaggagccctggctagtggctgtgctgaa
actacgcaattaatggctttacaagcttactcccaagctattggcctagcgttccaggta
caagacgacattcttgatatagaaagtcacaccgcgatccttggcaaacgccaaggcgct
gatatagcacgaaataaacttacttatcctatgctgcttggactagaagctgcgaaagtg
tatgtcctagaactgcgcgatcaagccttggatgcgctaatatctttcgacgcagctgcc
gaatcattacgctccttggcacggtatatcgttgcacgccgatactga
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