Candidatus Pseudomonas adelgestsugas: C3B55_00376
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Entry
C3B55_00376 CDS
T05857
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pade03016
]
C3B55_00376 (truB)
Enzymes [BR:
pade01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C3B55_00376 (truB)
Transfer RNA biogenesis [BR:
pade03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C3B55_00376 (truB)
Prokaryotic type
C3B55_00376 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
BAT
Motif
Other DBs
NCBI-ProteinID:
QAX81728
UniProt:
A0ABX5R843
LinkDB
All DBs
Position
624858..625796
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AA seq
312 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPIGLTSNSALQKVRWLLNAEKAGHTGSLDPMATGVLPLCFG
EATKFSQYLLNSDKNYETIMQLGKTTTTADVEGAVLRVRAVTVSHADIKAVLPAFRGQIS
QIPPMYSALKRDCQPLYKLARTGEVVERKSRLVNIARLELLSSEGDTARLSVHCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVKLEELEAVHAEGGNESTDRYLMPSDS
GLLDWPLLRFSKHSAFYWLNGQPVRVPGAPKFGMVRVYDYNNCLIGIGEVSEDGRIAPRR
LIRSKLSNKCDC
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggttaaacgtattcgtcgtaatgtcagtggtattattttgcttgataagccc
attggccttacctccaattctgcattacagaaggtgcgttggctgcttaatgctgagaaa
gctgggcatacaggtagccttgacccaatggctaccggcgtgttgcctttgtgctttggt
gaagctaccaaattctcacaatacttgcttaattccgataaaaattatgaaactattatg
caattaggtaaaactacaactacggctgatgtcgaaggtgctgtcctacgggttcgcgct
gtaactgttagccatgctgacattaaagctgtattaccagcttttcgtggacaaattagt
cagataccgcctatgtactcagcgctcaagcgtgattgccagcctctttataagctggcc
cgtactggcgaggtagtggagcgtaagtcgcgtcttgttaatattgcacggcttgagttg
ctttccagtgaaggcgataccgctcgattatcggtgcactgtagtaaaggcacctatatt
cgtactcttgtggaagatattggtgaacagctgggctgtggtgcatatgttgcagagtta
cgacgtactcaagcaggaccttttaccttagcccagacagttaaactagaagagctagaa
gcagtacatgccgaaggtggcaatgaatctactgaccgctatctaatgccatcagatagc
ggtttattagattggccattattacgtttctctaaacacagcgcgttctattggctaaac
ggccagccagtacgtgtccctggcgctccaaaattcggtatggtgcgggtatatgactat
aataattgccttatcggtatcggtgaagtgagtgaagatgggcgcattgcaccgcgtcga
ctaattcggtcaaaattatctaacaagtgtgactgttaa
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