Candidatus Pseudomonas adelgestsugas: C3B55_00411
Help
Entry
C3B55_00411 CDS
T05857
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pade03400
]
C3B55_00411 (phrB)
Enzymes [BR:
pade01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C3B55_00411 (phrB)
DNA repair and recombination proteins [BR:
pade03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C3B55_00411 (phrB)
Prokaryotic type
C3B55_00411 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QAX81757
LinkDB
All DBs
Position
complement(685998..687431)
Genome browser
AA seq
477 aa
AA seq
DB search
MHLIWLRTDLRLHDNTALAAACQSGKVAALYLITPQQWLIHNDAPCKVDFWLRNLKHLRQ
TLGELNIPLLIRTATTWHQAPTVLSKLCHELSIESVHINEEYGIHENQRDAAVAKTLKAN
GVTLHSYLDQIFFQPGTVLTKTGTYFQVFSQFRKACYNLLSNTLPHLVATPKAQTVIKLK
SDPIPEQVVGFIPPSKTLQAIWPAGEKEAHERLNAFVDQQIKRYKDERNFPAKTGTSQLS
AYLAAGMISPRQCLHAALQTNDGELENNNIGAITWINELLWREFYKHILVGYPRVSRHLA
FRRETEAVVWRQAPNDLAAWQEARTGLPIIDAAMRQLLEIGWMHNRLRMIVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPLKQSKKFDSEGMFIK
HWLPELTTLNKKEVHNPEEATKLFGVVNYPRSIIDLKQSRKRAIAAFHNLPSYQGGR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaatatggttacgtactgacttgcggctacacgacaatactgcgctagcggcc
gcctgccagagcggtaaagttgcagccctgtatctgatcacaccacagcaatggttaatc
cacaatgatgcgccatgcaaagttgacttctggctacgcaaccttaagcacctgcgccaa
acacttggcgaacttaacattcctttgctgatccgtaccgcgacgacctggcatcaagcg
ccaaccgtgctcagcaaactatgccatgaattatcaatagagtcggtacacatcaatgaa
gaatatggtattcatgagaaccagcgtgatgctgccgtagccaaaacactaaaagcaaat
ggcgtaacgttacatagctatctagaccaaatatttttccaaccaggcaccgtgctaact
aaaaccggtacctactttcaggtatttagccagttccgtaaagcttgctataacctctta
agtaacactctaccgcacctagtggcaactccaaaagctcagactgtaatcaagctaaaa
agcgatccaatacctgaacaagtcgtaggattcataccacctagcaaaaccttacaggcc
atttggcctgcaggtgaaaaagaagcgcacgaacgtctcaacgcttttgttgaccaacaa
attaagcgttacaaagatgagcgcaattttccagctaaaacaggtactagccagctttct
gcttacctggcggcaggcatgatttcaccacgccaatgcctgcacgccgcactacaaacc
aacgatggtgaactcgaaaataataatattggcgccatcacctggattaatgagctgcta
tggcgtgaattctacaaacacattttagtcggctacccaagagtgtcgcgccaccttgct
tttcgccgtgaaactgaagccgtagtatggcgtcaggcgccaaatgatctagctgcctgg
caagaagctcgcacaggcttaccaatcatcgatgcagccatgcgtcagttacttgagatc
ggctggatgcataacaggctacgaatgatagtagcaatgttcctaactaaaaacctcttg
attgactggcgtgaaggtgagcgcttttttatgcgccacttgattgacggcgatctagct
gccaataacggcggctggcaatggagtgcctctaccggtactgatgctgtaccatatttc
cgaatttttaacccgttaaaacagtcaaaaaagtttgatagcgaagggatgtttattaag
cactggctaccagagctaactacacttaacaaaaaggaagtgcacaacccagaagaagct
accaagctattcggcgtagtgaattatccacgctcaattattgatttaaaacaatctcgc
aaacgcgcaattgctgcttttcataacctgccttcataccaaggaggccgctaa
DBGET
integrated database retrieval system
