Candidatus Pseudomonas adelgestsugas: C3B55_00486
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Entry
C3B55_00486 CDS
T05857
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade03030
DNA replication
pade03430
Mismatch repair
pade03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3B55_00486 (dnaQ)
03430 Mismatch repair
C3B55_00486 (dnaQ)
03440 Homologous recombination
C3B55_00486 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pade03032
]
C3B55_00486 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pade03400
]
C3B55_00486 (dnaQ)
Enzymes [BR:
pade01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3B55_00486 (dnaQ)
DNA replication proteins [BR:
pade03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3B55_00486 (dnaQ)
DNA repair and recombination proteins [BR:
pade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3B55_00486 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Transp_inhibit
Motif
Other DBs
NCBI-ProteinID:
QAX81822
UniProt:
A0ABX5R848
LinkDB
All DBs
Position
complement(811852..812610)
Genome browser
AA seq
252 aa
AA seq
DB search
MITSRSVVLDTETTGMPVTNGHRIIEIGCIELMDRRLTGRHFHVYLQPDRDSDQCAINIH
GITDKFLKGKPRFAEVADEFFNFLNGAQLIIHNAAFDVSFINNEFALIGQTDRADISRHC
LILDTLIMARERHPGQANSLDALCKRYGVNNSSRELHGALLDSEILANVYLTMTSGQTSL
SLSGNTSDSDYSTKGSSNHPSEIQRLPKDRLPTPIIYASKQELAEHSARLEAISKSAGTM
ALWTQLTQKSLN
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgataactagccgatctgttgtgcttgatactgaaaccactggcatgccggtgactaat
ggtcaccggattattgaaataggttgcatagaattgatggatcgccgtcttactggacgt
cactttcacgtttacctgcaaccggatcgtgatagtgatcagtgcgcaattaacattcac
ggcatcaccgataaatttctcaagggcaagccacgctttgccgaagtagccgacgagttt
ttcaactttctcaatggagctcagctgatcatacataacgcagcgtttgacgttagcttt
attaataacgaatttgcactgataggtcagactgaccgtgcagatatttcccggcactgc
ttgatcctagatactttgataatggctcgtgagcgccacccaggccaggctaacagcctg
gatgctttgtgcaaacgctatggagtcaataactctagccgcgagttacatggcgctttg
cttgactcagaaatccttgccaacgtttacctaactatgacaagtgggcagaccagctta
tccctctctggcaatacctcagatagcgactactctactaaaggctcaagcaaccatcct
tcagaaatccagcggctgcctaaagatcgtctcccaactcctataatttatgccagtaag
caggagttagccgaacattcagcacgactggaggcaatttccaagtcggctggtacgatg
gcgttatggacacagctaacgcagaaatcacttaattaa
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