Candidatus Pseudomonas adelgestsugas: C3B55_00557
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Entry
C3B55_00557 CDS
T05857
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C3B55_00557 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pade03019
]
C3B55_00557 (rnc)
03009 Ribosome biogenesis [BR:
pade03009
]
C3B55_00557 (rnc)
03036 Chromosome and associated proteins [BR:
pade03036
]
C3B55_00557 (rnc)
Enzymes [BR:
pade01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C3B55_00557 (rnc)
Messenger RNA biogenesis [BR:
pade03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C3B55_00557 (rnc)
Ribosome biogenesis [BR:
pade03009
]
Eukaryotic type
90S particles
RNase
C3B55_00557 (rnc)
Prokaryotic type
rRNA processing factors
C3B55_00557 (rnc)
Chromosome and associated proteins [BR:
pade03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C3B55_00557 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QAX81890
UniProt:
A0ABX5R8C0
LinkDB
All DBs
Position
complement(937028..937708)
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AA seq
226 aa
AA seq
DB search
MTVLLSCLERQLGYVFKDQELMVLALTHRSFTGRNNERLEFLGDAILNFIAGQALFERFP
QAHEGQLSRLRARLVKGETLAMLARSFGLGKYLRLGSGELKNGGCCRASILADTIEAIIG
AIYLDAGIEAVKKHVTAWLHFELESLTLIDTHKDPKTRLQEFLQARRCELPCYTLVNIQG
KPHCRTFFVECEIILLNKKSLGQGMSRRIAEQLAATAALIALGVEE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgactgttttgctaagttgtttagagcgtcagctcggctatgtctttaaagatcaggag
ttgatggttcttgcccttacgcaccgtagttttactggacgtaataacgaacgcttagaa
tttctcggcgatgctattcttaacttcattgccggtcaagcactgttcgagcgtttccct
caggcccatgaaggccaactgtcacgcctgcgtgcgcgtctagtaaagggtgaaacccta
gccatgctagcccgtagttttgggttaggcaaatacctacgcctaggttctggtgaactg
aagaacggtggctgttgccgtgcatcaattctagctgatactatcgaagctattattggc
gcaatctacttggatgcaggcattgaagcggttaagaagcatgtcaccgcatggttgcac
ttcgaactcgaaagtctaacgctcattgatactcataaagatcccaagactaggctgcaa
gaatttctgcaggcacggaggtgcgagctgccatgctacacattggtgaatatccaaggt
aagccgcattgccgtacatttttcgtagaatgtgaaattatcttattgaataaaaaaagc
ctagggcaaggtatgagtcggcgtattgccgaacagttagcggcaaccgcagcactgatt
gccctaggtgtggaagaatag
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