Candidatus Pseudomonas adelgestsugas: C3B55_00716
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Entry
C3B55_00716 CDS
T05857
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade00071
Fatty acid degradation
pade00280
Valine, leucine and isoleucine degradation
pade00310
Lysine degradation
pade00362
Benzoate degradation
pade00380
Tryptophan metabolism
pade00640
Propanoate metabolism
pade00650
Butanoate metabolism
pade00907
Pinene, camphor and geraniol degradation
pade00930
Caprolactam degradation
pade01100
Metabolic pathways
pade01110
Biosynthesis of secondary metabolites
pade01120
Microbial metabolism in diverse environments
pade01200
Carbon metabolism
pade01212
Fatty acid metabolism
Module
pade_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C3B55_00716 (fadB)
00650 Butanoate metabolism
C3B55_00716 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
C3B55_00716 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C3B55_00716 (fadB)
00310 Lysine degradation
C3B55_00716 (fadB)
00380 Tryptophan metabolism
C3B55_00716 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C3B55_00716 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C3B55_00716 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C3B55_00716 (fadB)
00930 Caprolactam degradation
C3B55_00716 (fadB)
Enzymes [BR:
pade01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C3B55_00716 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C3B55_00716 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C3B55_00716 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
C3B55_00716 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
F420_oxidored
NAD_binding_2
NfeD1b_N
Motif
Other DBs
NCBI-ProteinID:
QAX82038
LinkDB
All DBs
Position
complement(1241066..1243222)
Genome browser
AA seq
718 aa
AA seq
DB search
MIYEGKAITVKTLESGVVELKFDLKGESVNKFNSLTINELRQAIDIIKADASVRGVIVSS
GKDVFVVGADITAFTSNFKLPYAELKADYLYANKIFSDFEDLKMPTVAAINGTALGGGLE
ICLAADFRVMSATAKIGLPEVKLGIHPGFGGTVRLPRLIGADNAMAWITTGKENSAIDAL
KMGAVDSVVVPDKLANAALNLIKSAINGEFDYKAKRQPKLEKLKLNAIEQMMSFETTKGF
IVGKIGTNYPAPIEVIKTIQKSANCGRDKALEVESAGFIKLSKTFVAQSLIGLFLNDQTL
KKKIKVYNKTAKDVNLAAILGAGIMGGGIAYQSASKGTPILIKDINQRSIEHSLAVASKL
LVNCVNQGHMTASKMAEVLNNIRPTLSYGDFGHVDLVVEAIVEHLQVKQDVLIEVEAQVK
DDTILASNTSTISISLLAKALRRPENFVGMHFFNPVHMMPLVEVIRGEKSSKLAIATTVA
YAKKMGKSPIVVNDCPGFLVNRILFSYFGGFAKLVSAGVDFVRIDSIMEKFGWPMGPAYL
MDVVGIDTCYHSQHIMAKSLSSRTKDGRRSAIDVLYEAKRLGQKNSKGFYAYEADKKNKQ
KKVSDLSVYELLATIIYEQCEVSDDNVINWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPSFRGGALRYIDSIGVAKFVALADQYANLGQLYHPTAKLREMAENGQSFFGSAL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaaactcttgaaagtggtgtagtagaacta
aagtttgacctcaaaggcgaatcagttaataagttcaacagtctgactattaatgaattg
cgtcaggctatagatattattaaagcagatgcttcagtcagaggtgtgattgtgtctagc
ggtaaagacgtgtttgtcgtaggtgctgacatcactgcatttaccagtaactttaagctg
ccatatgcagaacttaaggctgactacctatacgccaataagatttttagcgattttgaa
gacctcaagatgccaactgttgctgctatcaatggtaccgcgttaggcggtggtctagaa
atatgcttagctgcagactttcgtgtcatgtcagccactgctaaaattggcctgcctgaa
gtcaagctgggtatacatccaggtttcggcggcactgtgcgcctgccgcgcttaattggc
gccgataacgcgatggcatggattaccacaggtaaagaaaatagtgctatagacgcacta
aaaatgggtgctgttgactctgtggttgttccagacaaactagccaatgctgcattaaac
ctgattaagagcgctattaacggtgaatttgactataaggccaagcgtcagccgaagctt
gaaaaacttaagcttaacgctattgaacaaatgatgtcgtttgaaactactaaaggtttt
atagtgggcaaaataggtacgaattaccctgcgccaattgaagtaatcaagactatccaa
aaatccgctaattgtggccgcgataaagctttagaagtggaatctgccggcttcatcaaa
ctatcaaaaacctttgttgctcaaagcctaataggtttatttctgaacgaccagacactc
aagaaaaaaatcaaagtttataataaaactgctaaagatgtaaatctggccgctatacta
ggcgctggtattatgggtggcggtattgcttatcagtcggcgtctaaaggtacgcccata
ctgataaaagacatcaatcaacgtagcattgaacacagcctggcagtggcctctaagttg
ttagtgaattgcgttaatcaaggtcatatgactgcttcaaaaatggctgaagtacttaat
aatattcgtcctacgttgtcttatggcgattttggtcatgtagacctagtggtcgaagct
attgttgagcacctacaggtcaagcaagacgtactgatagaagtagaagctcaggtgaag
gatgacactatcttggcttcgaatacctcgactatttctatttcgctactagccaaggct
cttaggcgtccagaaaactttgttggtatgcacttttttaatccggtgcacatgatgccg
ttagtagaagtgattcgtggcgagaagtctagcaaactagctattgcaaccactgttgct
tacgctaaaaaaatgggcaagagcccaattgtggtcaatgactgtccaggttttctagtc
aaccgcatacttttctcgtactttggaggttttgctaagcttgttagtgctggtgtagac
tttgtgcgtatcgatagtatcatggaaaagtttggttggccgatgggcccagcatatctt
atggatgtagtgggcattgatacttgttatcatagccaacacatcatggctaagagcctt
tcaagccgcacaaaagacggccgccgatcggcgatcgacgttctctatgaagctaagcgt
ttaggtcagaagaatagtaagggcttctacgcctacgaagctgataagaaaaataaacaa
aagaaagtatccgatttatctgtgtatgaattacttgcgacaatcatttacgaacagtgt
gaggtatctgatgataatgttattaactggatgatgattcctttatgcttggaaactgtg
cgttgcttagaagacggtattgttgaaacggccgcagaagctgatatgggtctaatatac
ggtatcggtttcccttcatttcgtggtggtgcattacgttatatcgactcgattggtgtg
gctaaattcgttgccctagctgatcaatatgctaatttaggccagctgtaccacccgact
gctaaattgcgtgaaatggctgaaaacggccagagcttttttggttcagcgctttga
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