Candidatus Pseudomonas adelgestsugas: C3B55_00732
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Entry
C3B55_00732 CDS
T05857
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C3B55_00732 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pade03400
]
C3B55_00732 (ung)
Enzymes [BR:
pade01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C3B55_00732 (ung)
DNA repair and recombination proteins [BR:
pade03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C3B55_00732 (ung)
Prokaryotic type
C3B55_00732 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QAX82053
LinkDB
All DBs
Position
complement(1269222..1269935)
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AA seq
237 aa
AA seq
DB search
MLQNDLTMTDNIRIKLEPSWKYALLDELNKPYMVELRAFLRREYDACKEIYPPKQLIFSA
LNSTPLDKVKIVILGQDPYHGPGQAHGLCFSVQPGLPIPPSLVNIYKELRRDLNINIPNH
GCLQSWADQGVLMLNTTMTVERANANAHAGKGWQFFTDRIIKVVSEHQRHLVFMLWGAHA
QGKQNLIDMTKHLVLTSVHPSPLSAYRGFLGCGHFSKANKFIEQNNEMPIEWRLPFI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttgttacaaaatgatttgaccatgactgacaacatccgtattaaacttgaaccaagctgg
aagtatgccctgctagacgagttaaacaagccgtacatggtagagttacgcgcattttta
cgccgggaatatgatgcatgcaaagagatttacccaccgaagcagttgatttttagtgcg
cttaactccacccctctagataaggtcaaaatagtgattttaggccaagacccataccat
ggacctggccaagcccacggtttgtgcttttcggtgcaacctggcctaccaattccgcca
tcactggtcaatatctataaagaactacgtcgtgacctgaacattaatatccctaaccat
ggttgcctgcagagctgggcagaccagggcgtgttaatgcttaatacgactatgactgta
gagcgcgctaatgcaaacgcgcatgctggtaagggttggcagttttttactgacaggatt
ataaaagtagtcagcgagcatcagcggcacttggtatttatgttatggggtgcccatgcg
caaggcaagcaaaacttgatagatatgactaagcatcttgtgttgacgtccgtgcatcca
tcgcctttgtcggcgtatcgtgggtttttaggttgtgggcatttcagtaaggccaacaag
tttattgaacagaataatgaaatgccgattgagtggcgtttgccatttatctaa
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