Candidatus Pseudomonas adelgestsugas: C3B55_00757
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Entry
C3B55_00757 CDS
T05857
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade03030
DNA replication
pade03430
Mismatch repair
pade03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3B55_00757 (dnaE)
03430 Mismatch repair
C3B55_00757 (dnaE)
03440 Homologous recombination
C3B55_00757 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pade03032
]
C3B55_00757 (dnaE)
03400 DNA repair and recombination proteins [BR:
pade03400
]
C3B55_00757 (dnaE)
Enzymes [BR:
pade01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3B55_00757 (dnaE)
DNA replication proteins [BR:
pade03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3B55_00757 (dnaE)
DNA repair and recombination proteins [BR:
pade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3B55_00757 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QAX82076
UniProt:
A0ABX5R8U7
LinkDB
All DBs
Position
complement(1319289..1322810)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPVSFVHLRLHTEYSLVNGLVQIRPLVQALVDMNMPAVAVTEQNNMCSLVKFYKNAMSAG
IKPICGVDLWLSNKDQDNPLSSISLLAMNSVGYRNLTELISRGFLDGQRNGSVIIEREWI
VKASDGVIMLSAAKEGEIGIAMLGGNMKKAEALTIEWMRVFPDRFYLEVQRTNRPNDEEH
LHATVTLADKLGVPIVATNDVRFIKKEEFEAHETRVCISEGRTLDDPRRSKNCSEEQYLK
SANEMVNLFKDLPEALENSVEIAKRCNIEVTLDKHFLPRFLAPDGMIIDEYFRKVSFDGL
EERFSIMLPKDSTKDYEAKRQVYIDRLNLELDIIIQMGFPGYFLIVMDFINWAKSNGVPV
GPGRGSGAGSLVAYAQKITDLDPLEYGLLFERFLNPERVSMPDFDVDFCMDGRDSVIEYV
AKKYGRNAVSQIITFGSMTAKAVIRDVARVQGKSYSLADRLSKMIPFEVGMTLKKAYDYE
EILREFIGNNEEAAEIWNMACKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGDGLV
TQFDKDDVEAVGLVKFDFLGLRTLTIINWTLKTINRERAKADKEPLDISFIPLDDILTYT
LLQKAETTAIFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AKLAYPHSDYQYEGLQSVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRAGFIDGCAINNIEADLAGNIFDLVEKFAGYGFNKSHSAAYGLLSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVILIEEVRIMTLHLDAPDVNTSEFKFTVNDKNRIIYGLGAI
KGVGEGPVEAITEARHDGPFKNLFDFCARLHLKRINKRTLDSLIRSGALDRLGPYFYDEP
KAYKTNMNRNRAVLLAAMEEAIKAAEQTVRTQNSGHADLFGGLFIAEDSDVYANYRTTKE
LTIKERLKGEKETLGLYLTGHPIDEYEDEIRHFASQRIVDLKPVRETQTIAGMIIAIRVM
KNKKGDKMGVITLDDRSSRIEVSVFANIFHSTQSMLQTDIMVVVEGEVTNDDFSGGLRMR
TKRVMSMEDARINLAKSLCLMVKAKALKGDQLHWLGNLLKCYHGVCPVTMEYTSNDAKAL
LQLGDTWRINPADGLIQALRDQFGRESVSLQYF
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttcattcgttcatctacgcctgcacactgaatattccctggttaacggtcta
gtacagattagaccactagtccaagctttagtggatatgaatatgccagcagtagcagtt
accgagcagaacaacatgtgctccctggttaagttctacaaaaacgctatgagcgccggt
atcaagccgatttgtggcgttgacctatggctgtctaataaagatcaagataatccgctt
agtagtattagcttattggcaatgaatagtgttggttatcgtaaccttactgagctaatt
tcccgtggctttctcgatggtcagcgtaacggttcagtaattattgagcgtgagtggatt
gtaaaggcaagtgatggtgtaataatgctatctgcagctaaagaaggtgaaattggtatc
gcgatgctgggcggtaatatgaagaaagcagaagctcttactatagagtggatgcgggtt
tttcctgatcgtttctatctggaagttcagcgcaccaatcgccctaatgatgaagagcat
cttcatgctactgtaactttggctgataagctaggcgtgccgatagtcgcgactaatgat
gtgcgctttattaaaaaagaagaattcgaagcccacgaaactcgtgtttgtattagcgaa
ggccgtactctagatgatccacgccgttcaaaaaactgcagcgaagagcaataccttaaa
agcgctaatgaaatggttaatctatttaaggatctgcctgaagctctagaaaactctgtc
gagatcgccaaacgatgcaatattgaagttacgctagataaacacttcctgcccaggttc
ctggctcctgacggtatgattatcgatgaatattttcgtaaagtgtcgttcgatggccta
gaagaacgctttagtattatgttgcctaaggatagtactaaagattacgaggctaaacgc
caggtctatattgatcgcttgaatttagagctagatattattatccagatggggtttcca
ggttactttctcattgttatggactttattaattgggctaagagtaatggcgtaccggta
ggtcctggtcgagggtcaggtgctggttcactggtggcgtatgcacagaaaattactgat
ttagatccgttagaatatggtttgctattcgaaagattcctgaatccagaacgagtatct
atgcctgattttgacgtcgacttctgcatggatggtcgtgacagcgtaattgaatatgtg
gctaagaaatatggtcgtaatgcggttagccagatcattacctttggttctatgacggct
aaggctgtaattcgtgacgtggctagagtgcaaggtaaatcttatagtttagctgatcgc
ttatcaaaaatgattccatttgaagttggcatgaccctaaaaaaagcctacgattatgaa
gaaattttgcgtgaatttattggaaataatgaagaggctgccgaaatttggaacatggcg
tgtaagcttgaaggtgtcgtacgtaacgttggtaaacacgctggtggtgtagttattgcg
ccaaccaaactaactgatttttcgccgatatattgcgacgaagaaggtgatggcctggta
actcagttcgataaagatgatgtagaggcggttggcttggtgaagtttgatttccttggc
ctacgaactctaacgattattaactggacgcttaagacgattaaccgtgaaagggctaaa
gccgataaagagcctctagatatctcttttataccgctagatgacatactaacctatacc
ttgctacaaaaagccgaaactacagcaatattccagcttgagtcgcgcggcatgaaagag
ttgatcaagaagcttaagccagactgcctagaagatttgattgcactggtagctctattt
cgtcctggccctttgcagtcaggcatggtagatgactttatcaaccgcaagcacggtcgc
gccaaattagcgtatccgcattcagattatcagtatgaaggtctacagtcagtactggca
ccaacctacggtattatcctgtatcaggaacaggtgatgcagattgctcaggtaatggct
ggttatacccttggtggcgcagacatgctacgccgtgccatgggcaaaaagaaaccagaa
gaaatggctaagcagcgcgccggttttattgatgggtgtgctatcaataacattgaagcc
gatcttgccggtaatatttttgacttagtagaaaagtttgccggttacggtttcaataaa
tcccactccgccgcctacggccttttgtcatatcagactgcgtggttaaaagcccactac
ccagcgcctttcatggccgcagtactctcggctgatatgcataacaccgacaaagttgtg
attttgatcgaagaagtgcgcatcatgacattacaccttgatgcgccagacgtgaatact
tcggaatttaaattcacagttaacgacaaaaaccggattatctatggccttggtgctatt
aaaggtgtaggtgaaggtcctgtagaggcgatcaccgaagcgcgtcatgatgggccattc
aaaaatttatttgatttctgtgcacggcttcaccttaagcgtatcaataaacgcactctc
gatagtttgattcgtagtggtgcacttgaccgtcttggcccgtatttctatgacgagccg
aaggcttataagacaaacatgaaccgtaaccgtgcggtgctgctagctgctatggaagag
gcgatcaaggctgctgaacagactgtccgtactcaaaatagtggtcacgccgatctattt
ggcggtctatttattgcagaagactctgatgtctatgctaactatagaacgactaaggag
ctgactatcaaggagcgtctcaagggcgagaaagagactttaggtctataccttaccggt
catccgattgacgagtatgaagatgaaatacgtcattttgccagtcagcgcattgttgat
ctaaaacctgtgcgggagacacaaactatcgctggcatgattatcgctatacgggtaatg
aaaaataagaaaggcgacaagatgggcgttattacccttgatgatcgatctagccggatc
gaggtgtcagtgtttgctaatattttccactctacgcagtcaatgctgcagacggacatt
atggtagtagtagaaggagaagtcactaacgatgacttttctggcggtctacgcatgcgc
actaaacgcgtcatgagcatggaagatgctcgtattaatctggctaaaagcttatgtttg
atggttaaggccaaagcccttaaaggtgatcagctacattggttaggtaacttgctaaaa
tgttatcacggcgtttgccctgttacaatggagtacactagcaatgatgctaaggcgctg
ctgcagcttggtgatacgtggcgcattaatcctgctgatggcctaattcaggctctgcgt
gatcagttcggaagagaaagtgtttcccttcaatatttttga
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