Candidatus Pseudomonas adelgestsugas: C3B55_00807
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Entry
C3B55_00807 CDS
T05857
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3B55_00807 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pade03400
]
C3B55_00807 (uvrB)
DNA repair and recombination proteins [BR:
pade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3B55_00807 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C3B55_00807 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QAX82120
UniProt:
A0ABX5R8Z4
LinkDB
All DBs
Position
complement(1399747..1401762)
Genome browser
AA seq
671 aa
AA seq
DB search
MPDFQLVTNFKPSGDQPAAIRQMVEGIKAGLPYQTLLGVTGSGKTFSIANVIAQINRLTL
VLAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINARIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYVKMLLRIDCGDKFNQRELLRRLTGLQY
ARNDIDFARATFRVRGDVIDIYPAESNLEAIRVELFDDKVESLSAFDPLTGEVIRKLPRF
IFYPKSHYVIPREILIGAIESIKIELINRLEYLRSNNKLVEAQRLEQRTYFDLEMLLEIG
YCRGIENYSRYLSGRESGMPPPTLYDYLPSNALLVIDESHVSVPQIHAMYKGDRSRKQTL
VEYGFRLPSALDNRPMRFDEWETISPQTIFVSATPGKYEVEHASRVIEQLVRPTGLLEPQ
VEIRSALTQVDDLFSEITKRVVLKERVLVTTLTKRMSEDLTDYLANHSVRVRYLHSDIDT
VERVDIVRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKDGFLRSERSLIQTIGRA
ARNINGQAILYADRITSSMERAISETERRRDRQIIFNLTNSVTPKSVFKDVQNIMECLTV
PGLRNKKHTSLVKAATMNAKHENASCQLSEVTKYIRHLEEKMYQLVQDLEFEAAAQIRDE
ISKLRERLLVV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgccggatttccagcttgtaaccaattttaaaccatctggcgatcagccggcagctatt
cgccagatggtggagggcattaaagctggtttgccgtaccagactcttctcggggtcacc
ggttctggcaaaacctttagcatcgctaatgtgattgcgcagatcaaccgcttaacgtta
gtgctggcgccaaataaaacattagctgcacagctctatggcgagtttaaagcgttcttt
ccacataatgctgtagagtactttgtttcctattatgactactaccagcctgaagcttat
gtgccgtcttctgatacttttatcgagaaagatgcatcaattaatgctcgtattgagcag
atgcggttatcggcgactaaagcgctactggagcgcaaggatgcaatcattgttactacg
gtatcatgtatctacggtttaggcagcccggaaacctatgttaagatgttgctacgtatt
gattgcggcgacaaatttaaccagcgtgaattgctgcgccgtctaactggcttacaatat
gcccgtaacgacatagattttgctcgtgctacattccgtgtgcgcggtgatgtgattgac
atctatccagctgaatccaatctggaagcaatccgcgtcgagctattcgatgataaagtt
gagagtttatcagcctttgacccgctaaccggtgaggtaatccgtaaactaccacgcttt
atattttacccgaaaagccattacgtgattccgcgtgaaatcttgataggcgctatcgaa
agcataaaaattgaactaattaatcgcctagagtacttgcgctctaacaataaattagta
gaggcgcaacgcctggaacaacgtacatatttcgatctagaaatgctactagagattggt
tattgccgcggtatcgaaaattactcgcgttacctttcaggtcgtgaatctggtatgcca
ccaccaactctttacgactacctgccatctaatgccttgcttgtgattgatgagtcccat
gttagcgtgccgcaaattcatgcgatgtacaagggcgatcgttcacgtaaacaaactttg
gtagaatacggtttccgcctgccatctgcactggataatcgcccaatgcgttttgacgaa
tgggagacaattagtccgcaaactatttttgtatccgctacgcctggtaagtatgaggtt
gagcatgccagtcgcgtgattgagcagttagtgcgtccaacagggttattagagccgcaa
gttgagattcgctcggcgttgactcaggtagatgatttgttctcggagatcactaaacgt
gtggttctaaaagaacgggtactagtcactacgcttaccaagcgcatgtctgaagacctt
accgactacctcgctaaccatagcgtgcgtgtacgttatttgcactcagacatcgacacc
gtagagcgcgtggatatcgtacgcgatctacgtttaggtacctttgatgtgctagtaggg
atcaatctgctgcgtgaaggcctggatatgccagaagtgtcacttgtagcaattctagat
gctgataaggacggtttcctacgttccgagcgttctctaatccagaccattggccgtgct
gcgcgtaatattaatggtcaggctattctatacgcagatcgcattactagttctatggag
cgggcaattagcgaaactgagcgtcgtcgtgacagacagattatttttaatctgactaat
agcgtaacgcctaagagcgtatttaaggatgttcagaatattatggagtgtttgactgtg
ccaggtttgcgcaataagaagcacactagcttagtgaaggctgccacaatgaatgctaaa
catgagaatgcatcgtgtcaattgagcgaggttaccaagtatattcgacacttagaggag
aaaatgtatcagttagtacaggatctagagtttgaagcagcagcgcagatcagagatgag
attagcaagttacgtgagcgcttgttagttgtttaa
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