Candidatus Pseudomonas adelgestsugas: C3B55_00861
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Entry
C3B55_00861 CDS
T05857
Symbol
oprF
Name
(GenBank) Outer membrane porin F precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pade
Candidatus Pseudomonas adelgestsugas
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pade02000
]
C3B55_00861 (oprF)
Transporters [BR:
pade02000
]
Other transporters
Pores ion channels [TC:
1
]
C3B55_00861 (oprF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
OmpW
Motif
Other DBs
NCBI-ProteinID:
QAX82171
UniProt:
A0ABX5R9T7
LinkDB
All DBs
Position
complement(1524382..1525353)
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AA seq
323 aa
AA seq
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MKLKNTLSFAFGAVIVAAAFSALAQGQGAVEGQLFYEKQYNNSVTHIEDGFHPFAGIGYF
LTDDVSLNLSYNNTNYSHSGNGIGNNKIKGDASSVTAQYHLGQANVNSLRPYIEGGFAHQ
SHTNITTHGHTGRNQTTLAIAGAGAKYYFTNNLFARAGVEADYAIDNGKLDYAALVGLGV
NFGGNASAVDSISTPVHTSEPEAPVAQAIRVELDVKFDFSKSVVNYNSYGDVQRIANLMK
QYPHITIVLKGHTDSVGSDAYNQKLSQHRADAIKQLLVEDGIAPGRVSSVGYGKLRPVAD
NSTEAGRAINRRVEATIEVQANQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaaatactttgagctttgcttttggtgctgttattgttgctgctgccttt
agtgctctggcgcaaggccaaggagcagttgaagggcagctgttttacgaaaagcagtat
aacaatagcgttacgcatatcgaagatggatttcaccctttcgcaggtatcggttacttt
ttaactgatgatgtgtcgcttaacctgagctataataataccaactatagtcattccggt
aatggtattggtaataataaaataaagggtgacgctagcagcgtgaccgctcagtatcat
ttaggtcaggctaatgttaattcattgcgtccatatattgaaggtggcttcgctcatcaa
agccatactaatattactactcacggccatactggccgcaaccagactactctggcaatc
gctggggctggtgcaaagtattactttaccaataacctatttgctcgtgctggtgtagaa
gctgactatgccatcgacaatggtaagttagattatgctgcgctagttggtttaggtgtg
aattttggcggtaacgctagtgcagttgattcaatttctactccagtacacacttcagaa
ccagaagctccagttgctcaggctattcgtgttgagctagacgtaaagtttgatttttct
aagtcagttgtgaattacaatagctatggtgatgtgcagcgtatagctaatctcatgaaa
cagtacccacacattactatcgttcttaaaggtcacactgactcagttggttcagatgct
tataatcagaaactctcacagcatcgtgccgatgctattaaacaactcttagtcgaagat
ggtattgctcctggtcgtgtaagttcagttggttatggcaaactccgtccagttgctgac
aattcaactgaagctggtcgcgccatcaaccgtcgtgtagaagctacgattgaagttcaa
gctaatcagtaa
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