Candidatus Pseudomonas adelgestsugas: C3B55_00901
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Entry
C3B55_00901 CDS
T05857
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade00061
Fatty acid biosynthesis
pade00071
Fatty acid degradation
pade01100
Metabolic pathways
pade01212
Fatty acid metabolism
pade02024
Quorum sensing
pade04146
Peroxisome
Module
pade_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C3B55_00901 (fadD)
00071 Fatty acid degradation
C3B55_00901 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C3B55_00901 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
C3B55_00901 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pade01004
]
C3B55_00901 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pade04147
]
C3B55_00901 (fadD)
Enzymes [BR:
pade01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C3B55_00901 (fadD)
Lipid biosynthesis proteins [BR:
pade01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C3B55_00901 (fadD)
Exosome [BR:
pade04147
]
Exosomal proteins
Exosomal proteins of breast milk
C3B55_00901 (fadD)
Exosomal proteins of breast cancer cells
C3B55_00901 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QAX82206
LinkDB
All DBs
Position
complement(1601624..1603312)
Genome browser
AA seq
562 aa
AA seq
DB search
MNENFWKDKYPAGIAADINLEEYQNIQAVLKHSCQRFADKPAFSNLGKTITYGKLYELSG
LFAAYLQQHTYLKPGDRIAVQLPNILQYPVTVFGAIRAGLIVVNTNPLYTAREIEYHFKD
SGAKALVCLANVAYLAEQIVPKTTIKHVIITEVADLLSPCKRLLINSAIKYVKQMVPPYY
LPMAITFNYVLAKGRGQSVNDVSPASCDVALLQYTGGTTGIAKGVMLTHSNIIANMLQCK
AIMGFNLNEGCEVMIAPLPLYHIYAFTFHCMTMMLIGSHNILISNPRDVPSIVKELSRLV
FSGFVGLNTLFVALCNNKDFCKLNFSTLKVTLSGGMALQQAVAKRWKDITGCNICEGYGM
TETSPVVTVNPIQNIQIGTIGIPVPSTVCKVITNDGVELALGETGELCVKGPQVMKGYWQ
REDATAEILNSEGWLKTGDIAVIQLDGYVRIVDRKKDMILVSGFNVYPSELEDVLAILPS
VLQCAAIGIPDTKSGEYIKIFIVIKPGATLTKNQVMKHMRAHITGYKMPKVIEFRNVLLT
THVGKILRRELRNEELKKLGIK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaacttttggaaggataaataccctgccgggattgctgcagacatcaatcta
gaagagtatcaaaatattcaggcggtactgaaacattcctgccagcgtttcgctgataaa
ccggcttttagtaatttaggtaagacgatcacttacggtaaattgtatgaattgtctggc
ttattcgccgcttatctgcaacagcatacctacttaaaacctggcgatagaatcgctgtg
caacttccaaatattctgcaatatccagttacagtgtttggtgctatccgtgctggcctg
attgtagtcaacactaacccgctatatacagcgcgggaaatagaatatcacttcaaggat
tccggtgcgaaggctttagtttgtctagctaacgtagcgtacttagccgaacaaatcgta
cctaaaactaccatcaagcatgttattatcactgaagtcgccgacttattgtcgccatgt
aagcgcttgcttattaatagcgctatcaaatacgtgaagcaaatggtcccaccatattat
ttacccatggcgattacgtttaactacgtactggccaagggacggggtcagtcagtcaat
gatgtcagtccagctagctgtgatgttgctttgttacaatacaccggtggtactactggt
attgctaaaggcgtaatgctcactcattctaatatcatcgccaacatgctgcagtgtaaa
gctatcatgggctttaacctcaatgagggttgtgaggtcatgattgcgccgctgccattg
taccacatctacgcgttcacttttcactgtatgacaatgatgctaattggcagccacaac
atcttgattagtaacccgcgtgatgtaccatctatagtcaaggaattatcgaggttggtg
ttcagcggctttgttggtctcaatacgctgtttgtggcgctgtgtaataacaaagatttt
tgcaagctaaatttttctacgcttaaagttaccctatccggtggtatggccttgcaacag
gccgttgctaaacgttggaaggatataaccggttgcaacatctgcgaaggttacggtatg
actgagactagcccggtggtgacggtcaatccgatccaaaatatccagattggtaccatt
ggtattccagtgccatcgactgtctgcaaagttatcactaatgatggcgttgagctagcg
ctaggcgaaaccggtgagctatgcgtcaagggtccgcaagttatgaaaggctattggcaa
cgcgaagatgctactgccgagattctcaacagtgaaggttggttaaagactggcgacatc
gcggttatccagttagatggttatgtgcgtattgtggatcgcaagaaagacatgatcttg
gtctctggttttaacgtctatcctagcgagctagaagatgtgttagcaatcttgcccagt
gtattacagtgtgcagctattggtataccggatacaaaatccggtgagtatattaagatt
tttattgtgattaagccaggggctactcttactaaaaatcaagtgatgaagcatatgcgt
gctcatattactggctataagatgcctaaagttatagagttccgtaatgtgttgctgact
actcatgtaggtaagatcctacgccgtgaactacgcaatgaggagctgaagaagttgggc
attaagtaa
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