Candidatus Pseudomonas adelgestsugas: C3B55_00988
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Entry
C3B55_00988 CDS
T05857
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C3B55_00988 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pade03400
]
C3B55_00988 (recC)
Enzymes [BR:
pade01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C3B55_00988 (recC)
DNA repair and recombination proteins [BR:
pade03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C3B55_00988 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
QAX82287
LinkDB
All DBs
Position
complement(1763498..1766932)
Genome browser
AA seq
1144 aa
AA seq
DB search
MLDTMFLSAGFIIIHSNCMDELRSLVVSWMRRYPLKPLENEIILVQSNEIAQWLKLALAE
DPEGNDLGGHGIAAAIDVQSPDSFMWQLYHMVLGKHKIQSQSLFNKAKLIWRLMRLLPEV
IDQPHFEPLQSFLAYDINLRKRYQLAERLADLFCQYQVYRADWLVDWGAGRYQLRNGLGE
FKLLDQASCWQAELWRALLLDIGQKSTADSRISVHQHFIEQINVLEKANLNLPSRVIVFG
ISSLPAQTIEALAALAKFSQVLLCVHNPCRYYWLDIAADKHVFNTKYKRQARKVGMPVNI
DQHATHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYCTAFRDNRIDLFRENEPTTMLNQL
QDDVLNLRSINETKRLWPDVDLSSDISIRFYIAYSAQREIEILHDQLLQRFDADPKLRPR
DIIVMAPCIDSYAPHIHAVFRQFTRKDSRFIPFVLDDKGQHRRDPLLIAFEHLLKLSESR
FPVNEVLDLLDVPALRKRFAIKECDLPTLYRWIEGAGIRWGLHAEQRASLGLPDELEQNS
WRFGLRRMLLGYASGNGVAYNSIEPYDEIGGLDAVLIGPLAALLDALDQAYQALSQPAIP
KEWGERLQRLMQLFFLPSSEHDCYLLNQLKQLREYWLETCDAVGLQDELPITVVCEALFA
DHGQVQSSQHFFSGAVNFCTLMPMRAIPFKLICLLGMNDGDYPRAQQRLDFDLMSRDYRQ
GDRSRREDDCYLLLEVLLSVRDQLYISWVGRSIRDNSERTVSVLISQLRDHLADGWHNAY
KEQLLLEAITQEHPLQPFSARYFQESDSLFSYAYEWLLYHKVSDNAREVKLAQHYQEVPL
SINQLQDFLRNPVQNFFSQRLKVFFEATEVPLVDEEPFALNELQRYSFSDIMLSAALNQP
DHADQILKFQAMHLQGRGLLPMAGFGECLRYELIAQLSDQLQRYRRLLSLWPTPKVATEL
IRFNHQGIQLNCWISDLHQRSDGGLLSVTVIPNSIGSIKNRKWHYLIRPWVKHVVACACN
LPLSTGLVASDDTLLFSSLDKSTAQDILENLLLAWRIGMQQPLSVAVKTACAWLIQTEPA
KAKAAAKKAYEGDGLTTKGECREIPALTRQFPNFAALMASKEFEYWAEILYNPLINAQCQ
SLTS
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgctagatactatgtttctgagtgctggatttattataatccatagtaattgtatggac
gagctgcgtagcctggtagttagttggatgcgccgttatccacttaagccactagaaaat
gaaataattctagtccagagtaatgagatagctcaatggcttaagttggccctggctgaa
gacccagaaggaaatgatttaggtggtcatggtatcgctgcggcaattgacgtacagtct
ccagatagttttatgtggcagctgtatcatatggttttaggtaaacataaaatccagtca
cagtctttatttaataaagccaagctaatttggcgactaatgcgcttacttcctgaggtc
attgaccaaccacactttgagccactacaaagttttcttgcttacgatattaatctacgt
aaacgctatcagttggctgagcgcttagctgacttgttctgccagtaccaggtctaccgt
gctgactggttggtagattggggtgctggccgctatcagctgcgcaatggcctaggtgag
tttaagctgttagaccaagcaagctgctggcaggcagaattatggcgcgcattgctattg
gacataggccagaagagtacagccgacagccgcatcagtgtccatcagcattttattgag
caaattaacgtcctcgaaaaagccaacctaaatcttccctccagggtaattgtttttggc
atttcttccttacctgctcagacaatagaagctcttgccgctttagcaaaatttagccag
gttctgctttgtgtacataacccttgccgttattactggcttgacattgccgccgataaa
cacgtttttaatacaaaatataaacgccaagcgcgaaaggttggcatgccggttaatatt
gaccagcatgccacgcatcagcatgctcatccactgttggctgcctggggcaaacagggc
cgtgactacatcagtttactagatagttacgatgaccccaatagctattgtactgctttc
cgtgataaccgtattgacctgttccgtgagaacgaacccactacaatgcttaaccaattg
caggatgatgtcctcaacctgcgaagcataaatgaaaccaaaaggctttggccagatgtc
gatctaagtagcgatatctctatccgcttctacattgcttatagcgcccagcgcgaaata
gaaatccttcatgatcaactgttacagcgttttgatgctgatccaaagttgcgtccacgt
gatattattgtaatggctccttgtatcgacagttacgcaccgcacattcatgctgtgttt
agacagtttacacgaaaagactcacgtttcatcccgtttgtgcttgacgataaaggccaa
caccgacgtgatccgctattaatcgctttcgaacatttgctaaaactctcagagagtcgc
ttcccagttaatgaagttcttgatttacttgacgttcctgccttacgcaaacgtttcgcc
atcaaagagtgcgacttgcctacgttataccgctggatcgaaggtgccggtatccgttgg
ggtttgcacgctgaacaacgtgctagcctcgggctaccggatgagctggagcaaaacagc
tggcgatttggtttgcgccgcatgctgcttggttatgcatcaggcaatggtgtagcctat
aactctattgagccatacgatgaaataggtggcctcgatgcagtattgattggaccgttg
gctgccttgctcgatgctttagatcaagcttatcaagctctctcacaaccggcaatacca
aaagaatggggtgagcgcttgcaacgtctaatgcagttgttctttttacctagcagcgaa
cacgactgctacctcttaaaccaactgaagcaacttagagaatattggttggagacctgc
gatgctgttggcctgcaagatgagttacccattactgtagtttgtgaagctttgtttgct
gaccatggccaagttcagtcgtctcaacactttttctctggagctgtaaatttctgtact
ttgatgccaatgcgtgccattccctttaagctaatttgtttgctgggcatgaacgatggt
gactatccgcgtgctcaacagcggctagacttcgatctgatgagtagagactatcgtcaa
ggtgaccgttcacgccgcgaagatgattgttatctactgctagaagttctgctgtctgtt
cgcgatcagctttacatcagctgggtaggtcgcagtattcgcgataatagcgaacgtaca
gtttccgtattgattagccaattgcgcgatcaccttgctgatggctggcataatgcatac
aaagaacagctcttgctggaggcaataacccaagagcacccgctgcaaccatttagcgcg
cgctactttcaagaaagcgactcgctattcagttatgcatacgaatggctattgtatcac
aaagtatcagataatgcacgagaagtcaagctagcacagcactatcaggaagtaccctta
agtattaatcagctgcaagattttcttcgcaatccagtacaaaactttttcagtcaacgc
ctgaaggtattcttcgaggcaaccgaagtaccgttagttgatgaagaaccatttgcgctt
aacgagctacaacgctatagctttagtgatattatgctaagcgctgcactaaatcagcct
gaccatgccgaccaaatacttaaatttcaagctatgcacctacaaggcagaggcctgttg
cctatggctggctttggcgaatgcttgcgttatgagctgatcgcacaactgtccgatcag
ctgcaacgttaccggcgcttactatcgctttggccaacgccaaaagttgctactgaactg
attagatttaatcatcaaggcatccagttgaattgttggatcagtgacttgcatcagcgt
agtgatggcggcttgctaagtgtgaccgttatccccaacagtatcggttcgattaagaac
cgtaagtggcactacttgatccgtccatgggtaaaacacgtagtagcctgcgcctgtaac
ctgccactaagcactggtcttgtcgctagtgatgacactttactcttcagttcactggat
aaatccactgcccaagacattttagaaaacctattattagcttggcgcatcggcatgcaa
cagccgctctctgtagctgttaaaactgcttgtgcctggcttatccaaactgagccagct
aaggctaaagctgctgcaaaaaaagcttacgaaggtgatggtttaactactaaaggtgaa
tgtcgcgaaattccagcgcttacccggcaatttcctaacttcgctgcattaatggccagc
aaagagtttgaatattgggctgaaatcttgtataatcccttgattaacgctcaatgtcaa
tcgctcactagctag
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integrated database retrieval system
