Pygoscelis adeliae (Adelie penguin): 103912598
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Entry
103912598 CDS
T06012
Symbol
DDX3X
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX3X
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103912598 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
padl03019
]
103912598 (DDX3X)
03041 Spliceosome [BR:
padl03041
]
103912598 (DDX3X)
03036 Chromosome and associated proteins [BR:
padl03036
]
103912598 (DDX3X)
Enzymes [BR:
padl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103912598 (DDX3X)
Messenger RNA biogenesis [BR:
padl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103912598 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
103912598 (DDX3X)
Spliceosome [BR:
padl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103912598 (DDX3X)
Chromosome and associated proteins [BR:
padl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103912598 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103912598
NCBI-ProteinID:
XP_009317169
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
YFFXFSGLDLNSSDSQSEGSSSSKGRYIPPHLRNREASKQGFDSGGWSSSRDKDAYSSFG
ARSDRGAKSSFFDRGNGSRGGRYEERGRGGDYDRSGFGRFDRGGNSRWSDKSDEDDWSKP
LPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTR
YTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGR
YGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHL
LVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTM
MFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATG
KDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATA
VAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDL
LVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTSSGSGSSSFSSSRS
TSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
tattttttctagttttctggtctagacttgaattcctcagactctcagagtgaaggaagc
tcttcaagcaaaggccgatacattcctcctcacttgcggaacagggaagcttcaaaacag
ggttttgatagtggtggctggagttctagcagagacaaggatgcgtacagcagctttggt
gcacggtctgaccgtggagcaaaatcaagcttctttgaccgtggaaatggatcaagagga
ggaagatatgaagagcgtggaagaggtggtgactatgataggagtggctttggtagattt
gaccgtggtggaaatagccgctggtctgacaaatcagatgaagatgactggtcaaagcct
cttcccccaagtgaacgcctggaacaagagctcttttcaggaagcaatactggcattaac
tttgagaaatatgatgacattcctgttgaagcaacaggcagcaactgtcctccacatatt
gaaagtttcagtgatgttgacatgggagaaattattatgggaaacattgagctcacacgc
tacacccgtccgactccagtccagaaacatgcaatacctattattaaagaaaagagagac
ttgatggcctgtgctcagacagggtctgggaaaacggctgcatttcttctaccaatattg
agccagatctatgcagatggccctggtgatgccttgagagctatgaaggagaacggaagg
tatgggcgccgtaagcaatatccaatctcactggtcttggctcccactagagaattggct
gtgcagatctatgaggaagccagaaagtttgcataccgttccagagttcgtccctgtgtt
gtatatggtggtgcagacatcggtcagcagatacgtgacttagaacgtggatgtcacttg
cttgtagcaactccaggaagactggttgatatgatggagaggggaaaaattggattggat
ttctgcaagtacctggtgcttgatgaagctgacagaatgcttgatatggggtttgaacct
caaattcgtcgaattgttgaacaagatacgatgccaccaaagggggttcgtcataccatg
atgttcagtgctactttccccaaggaaatccagatgcttgctcgtgacttccttgatgaa
tatatctttttggctgttggcagagtaggttctacatctgagaatatcacacagaaagta
gtatgggtggaagagtcagacaaacgatcgtttctgcttgacctgctaaatgccacaggc
aaggattccttgactctggtgtttgtggaaactaaaaagggtgcagatgctcttgaggac
ttcttgtaccatgaaggatatgcctgtacgagtatacatggagatcgctctcaaagagac
agagaggaagcactgcaccagttccgttcgggcaagagcccaattcttgttgccacagca
gtagcagcaagaggactggatatctcaaatgtaaagcatgtcataaactttgacttgcca
agtgacattgaagagtatgtacatcgtattggtcgtacaggccgagtaggaaaccttggt
cttgccacctcattcttcaatgagaggaacatcaacatcaccaaggacttgcttgatctt
cttgttgaggctaagcaagaagtaccatcttggctggaaaacatggcttatgaacagcat
cacaaaggaggtggcagccgtgggcgatctaagagcagtaggttcagtggaggatttggt
gccagagactatcgaacaagtagtggttctggcagcagtagctttagtagcagtcgatca
accagcagccgcagtggaggaagtggcagcagaggatttggaggtggtggttatggaggc
ttctacaacagtgatggatatggaggaaactataactcccagggggttgactggtggggc
aactga
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