Pygoscelis adeliae (Adelie penguin): 103912654
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Entry
103912654 CDS
T06012
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103912654 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
padl03041
]
103912654 (PRPF40A)
Spliceosome [BR:
padl03041
]
Complex A
U1 snRNP components
U1 related factors
103912654 (PRPF40A)
Complex B
103912654 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
103912654
NCBI-ProteinID:
XP_009317287
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMM
SHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQSSVLFRPQTTHPVVCAAQQTATTNSSVNE
EHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP
YYYNSQTKESRWAKPKELEDLEAMIKAEENSAKPEESTPTTSAPAAAAEATNTTTTATTA
AETAAAVTTTTATSAATAAPEAESAAASSVVENESTGTAAAEEQGQATSAPAVQEQSGET
AANAADDSSKQEASADAASKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASW
EQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHE
KMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALK
NILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEE
KQKSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPVF
SSGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATT
LDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIR
DRFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSG
SESEDDDSHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDTE
REKDKKERERESEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLL
EQLDEDQ
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggacacccaggcatgccgcattatcctcccatgggaatgcaccctatgggtcagaga
ccaccaaatatgccgccagttccacacggtatgatgcctcagatgatgccccccatggga
ggaccaccaatggggcagatgcctggaatgatgcagtcagtgatgcctggaatgatgatg
tctcacatgtctcaagctgctatgcagcctacagttccgccaggggtgaacagtatggac
gcacaagtaggtgtaacacctcctggaactcagagctctgttttgtttcgccctcagaca
acacatcccgtagtttgtgcagcccagcaaactgccacaaccaacagttctgttaatgaa
gagcactctaaacagaaatctacatggacagaacacaaatcacctgatggaagaacatat
tactataatactgaaacaaagcagtctacatgggagaagccagatgacctcaaaacacct
gctgagcaattgttgtctaagtgtccctggaaagagtataaatctgattctggaaagccc
tactattataattcccaaacaaaggaatcgcgctgggcaaaacccaaagagcttgaggat
cttgaagcaatgattaaagctgaagaaaacagcgcaaagcccgaagaatcaactccaaca
acatctgctccagctgctgcagcagaagcaacaaacacaaccaccacagccacaactgct
gctgaaactgccgcagctgttactaccaccactgctacttctgcagcaacagcagccccc
gaagcagaatctgctgcagcttcttctgtggtagaaaatgagagtactggcacggctgca
gctgaggagcagggacaagcaacttctgcccctgctgtgcaggaacagagtggagaaact
gcagctaatgcagcagatgactcttccaagcaggaggcctcagcagatgctgcttcaaag
aaagaggatgatgatgcccaaccagttaaaaaaacctatacatggaatacaaaggaagaa
gcaaagcaagcatttaaagaactcttaaaagaaaagcgagtaccgtccaatgcttcttgg
gagcaagctatgaaaatgatcattaatgatcctagatacagtgctttggcaaaattaagt
gaaaaaaagcaagcctttaatgcttacaaagttcaaacggaaaaagaagagaaagaagaa
gcaagatcaaaatacaaagaagctaaagaatccttccagcgttttcttgaaaaccacgaa
aagatgacatccacaacaagatacaaaaaagctgaacaaatgtttggggagatggaagtc
tggaatgcgatatctgagcgtgatcgtcttgaaatttatgaagatgtgttgttttttctg
tctaagaaagagaaggaacaagccaaacagttacgaaagaggaattgggaagctttaaag
aacatactagataacatggctaatgtcacttactgtactacttggtcggaggctcagcag
tatctgatggacaatcctacctttgcagaagatgaggagcttcagaacatggataaggag
gatgcactaatctgttttgaggaacatatcagggcattggaaaaagaggaggaagaagaa
aaacagaaaagtttgcttagagaaagaaggcggcagcgtaaaaatagagaatcttttcag
ctatttttagatgagctgcacgagcatggacaactgcattcgatgtcctcttggatggag
ttgtacccaaccataagctctgacatcagattcactaatatgcttggtcagcctgttttt
tcatcaggatcaacagcacttgatcttttcaagttttatgttgaagacttgaaagcacgt
taccatgatgaaaagaagataataaaagatatcttaaaggataaaggatttgtggttgaa
gtgaatacttcttttgaagactttgttacggtcatcagctcaactaaaagagctactact
ttagatgcaggaaatatcaagctggctttcaacagtctgctagaaaaggcagaagcccgt
gaaagagagagggaaaaagaagaagctcgcaaaatgaagcggaaagagtctgccttcaag
agtatgttgaagcaggctactcctccgattgaattggacgctgtctgggaagatatcaga
gatagatttgtgaaggaaccagcgtttgaagacatcactctggagtctgaaagaaaaaga
atatttaaagatttcatgcatgtactagagcacgagtgtcagcatcatcattcgaagaac
aagaaacattctaaaaagtctaaaaaacaccacaggaagcggtctcggtctcgttcgggc
tcagagtctgaggatgatgatagccattcaaagaagaaaaggcagcgttcagaatctaga
tcagtttctgagcgttcttccagtgcagaatccgagagaagttacaagaagtcaaaaaaa
cacaagaaaaagagcaagaagagaagacacaagtctgattcaccagaatcggatactgaa
cgagaaaaagacaaaaaggagagagagagagagagcgaaaaggacagagctaggcaaaga
tctgaatcaaaacataaatctcctactaaaaaacgacctggaaaagattctgggaactgg
gatacttctggcagcgaactgagtgaaggggagttggaaaaacagaggaggactcttttg
gaacaactggatgaagatcaatga
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