Pygoscelis adeliae (Adelie penguin): 103912741
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Entry
103912741 CDS
T06012
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103912741 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
padl03019
]
103912741 (HBS1L)
Messenger RNA biogenesis [BR:
padl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103912741 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
103912741
NCBI-ProteinID:
XP_009317412
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MRGYAVGYRRTPGACRWLQEAGFLVSSRPDKKMVNKVLKVLKMETSDLRNIDGTVCLAAP
EHVNECSGVAGCRHSQGRLQHREERGLPPSGGGRGVQALPLAGPGLSTTPPEAAPRDLPE
RDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEEYGYEGTDDTADYFTS
NHQLTEVDRARLNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKALDLVLSQGSKQNVK
TKNEDAVVVGKTTKGKTRDSQSARMESEIVPKVTKMTVSGKKQSMGFEVPCVIAEENGHA
NTPQKGLLTEDASVASGVLEAVSQSTLSPQVVQVSEEQNTVPTPLKKSSKTKPQIDVKAE
LEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYA
WVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAILVVD
ASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEIISKLGQFLK
QAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDSFKPPQRSVDKPFRL
CVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGIVLHDEPVDWAAAGDHV
SLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKGFPVLLHYQTVSEP
ATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYKDFKELGRFMLRYS
GSTIAAGVVTEIKE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggctacgcggtgggatatcggaggacacctggggcatgcaggtggctgcaggag
gctggatttctggtgtcgtcaagaccggataaaaagatggtaaataaagtattaaaggtc
ttaaagatggagacatctgacttgagaaatattgatgggaccgtctgcctagcagctcct
gagcatgtaaatgaatgcagcggggtggctggatgccggcactctcagggtcggctgcag
catcgcgaggagcggggtcttcccccgtcggggggcggccgaggtgtacaggcgttaccg
ctcgcagggccgggcctgagcacgacgccaccggaggctgcgccgagagacctcccagag
cgcgattttgaagatgatgatgtgtatggccaatcagtagaagatgattattgcatttct
ccttcaacagcagctcaatttatctactccagacgagacaaaccagcaacatttgctgag
ccattagaagaagaatatggctatgaaggtacagatgatactgctgattattttacatca
aatcatcagttgactgaagttgatagagcccgtcttaattcatgccttgatcaaatgaga
gaagttttggcagagtctgtaccagagcaaacaatggtgcaagcagtactggatagtaaa
tttgatgtacagaaggctttggatcttgtgctttcacaaggcagtaagcaaaatgtgaag
accaagaatgaggacgctgtggttgtaggaaagacgacgaaaggaaaaacaagggattcc
cagtcagccagaatggaatctgaaattgtgccaaaagttaccaaaatgacagtgtctgga
aagaaacagtctatgggatttgaagttccatgtgtgattgctgaagaaaatggccatgct
aacacacctcagaaaggactgttaactgaagatgccagtgtagcttctggggtacttgag
gcagtctcacaatctactctttcaccccaagtagtgcaggtttcagaagagcagaatacg
gtgccaactccactaaaaaagtcaagcaagacaaaaccacaaatagatgtgaaagcagag
ttggagaagagacaaggaggaaagcaactgcttaatttggtggtaataggacatgttgat
gcaggtaaaagtactttaatgggtcatctgctctaccttttgggaaatgtgaacaaaaga
actatgcacaaatacgaacaggaatctaagaaggctggcaaagcttcatttgcctatgca
tgggtcttggatgaaactggtgaagaaagagaaaggggagtgacaatggatgtgggtatg
accaaattcgagacaaagactaaagtaattacactgatggatgctccaggccacaaagac
ttcattccaaatatgatcacaggagctgcacaggctgatgtggctattttggttgtggat
gctagcagaggagagtttgaagcagggtttgagacgggtggacaaactcgagaacatgga
ttattagtgcgctctcttggagtgacacagctagctgttgcagtcaataaaatggaccag
gtcaattggcaacaggaaagatttcaggaaattataagtaagctcggccaatttcttaaa
caagctggctttaaggaatcagatgtggcttatatcccaacgagtggccttggtggtgaa
aatctggtcacaaggggtcagtcaagtgacctcacgcagtggtataaaggaaagtgtttg
ttagagcaaattgattctttcaagccaccacagagatcagtggataaaccatttaggttg
tgtgttgctgatgtttttaaagaccaaggatcaggattttgtgtgactggtaaaatagaa
gcaggctatattcaagttggagaacgacttctggcaatgcctcccaatgaaacttgcact
gcaaaaggaatcgtactgcatgatgaaccagttgattgggctgcagcaggagatcacgtt
agtctcactttgaccggcatggatatcatcaaaatcaatgttggctgtgtattttgtgat
cccaaggaacccattaaagtttgcactcgtttcagagctcgggttctcatcttcaatatt
gaggttccaatcactaaaggatttcctgtgcttttacactatcaaaccgtaagtgaacct
gctactattagaagactgttgagtgtcctgcacaaaagcactggtgaagtgacaaagaaa
aaacctaagttcttgactaaaggacagaatgctttaatagaactacaaactcaaagacct
gttgctctagagttgtataaagattttaaagagcttgggaggtttatgttacgttacagt
ggttccactattgctgcaggagttgtcacagagattaaagaatga
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