Pygoscelis adeliae (Adelie penguin): 103913007
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Entry
103913007 CDS
T06012
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103913007 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
padl03019
]
103913007 (CPSF2)
Messenger RNA biogenesis [BR:
padl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103913007 (CPSF2)
U7-dependent histone pre-mRNA processing factors
103913007 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
103913007
NCBI-ProteinID:
XP_009317728
UniProt:
A0A093NIG3
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKERLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDLE
MQVDMPSSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgatcatcaagttgaccacgctttcaggggtgcaggaggaatctgccctttgc
tatctgttacaagtagatgaatttcgttttcttttggactgtggctgggatgaaaacttt
tctatggatattattgattctctgagaaaacatgtgcaccaggttgatgctgttcttctt
tctcatcctgaccccctacaccttggtgctcttccatatgcagttggaaaaatggggttg
aattgtgctatttatgcaactattcctgtatataaaatgggacagatgtttatgtatgat
ctctaccagtcccgccataacactgaagatttcacactctttacattggatgatgtagat
gcagcctttgataagatacaacagctgaagttttctcagattgtgaacttgaaaggcaaa
ggacatggtttgtcaattacaccattgccagctggccacatgataggaggcacaatttgg
aagattgtcaaggatggagaggaagaaattgtttacgcagttgatttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttgagcaggccttcattgcttattaca
gattcatttaacgctacttatgtacaacccaggaggaagcaaagggatgaacagctactg
actaatgttttggagacattacgaggtgatggaaacgtattaatagccgtggatacagca
ggcagagttctggaacttgctcaacttcttgatcagatctggagaacgaaagatgcagga
ttaggagtctactctttagcactcttgaataacgtcagctacaatgtagtggagttctct
aaatcacaggttgaatggatgagtgacaagttgatgaggtgctttgaagacaagagaaac
aatccttttcagttccgccatctctccttatgtcacagtctgtctgatctggctcgagtg
cctagtccaaaagttgttcttgccagtcaacctgacttagagtgtgggttttccagagat
cttttcattcaatggtgccaggattccaaaaactctataattttaacgtaccgcactaca
cctggaacattagcacgattcctgattgataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaagttggaaggaaaagaacttgaagaatacctagaaaaggaaaga
ctgaagaaagaagcagctaagaagttagaacagtctaaagaggcagatattgattccagt
gatgagagtgatgctgaagaggatattgatcagccaactgtacataagaccaaacacgat
ttgatgatgaaaggtgaaggtagccggaaaggaagtttcttcaaacaggcaaagaaatct
tatccaatgtttccagcccctgaagaaagaattaaatgggatgaatatggcgagattatc
aaacctgaggattttctagttccagaacttcaagcaacagaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagaagagcctatggaccaggacttatcagatgttcctacc
aaatgtatttctgcaacagaatccatggaaattaaagccagagttacatatattgactat
gaaggacgctcagatggggactcaattaaaaaaattattaaccaaatgaaaccacgacaa
ctgatcattgtccatggaccacctgaggccagtcaggaccttgcagaatgttgcagagct
tttggtggaaaagatattaaagtttacatgccaaaactgcatgaaactgtagatgcaacc
agcgaaactcacatttaccaggtcaggttaaaagattctcttgtcagctccctacagttc
tgcaaagccaaggatgccgagttggcctggatagatggtgttctggacatgcgggtttcg
aaagtggatactggagttattttggaagagggagagctgagggaagatgaagacttagag
atgcaagtggatatgccttcttcagactctagtgtcattgcacaacagaaggccatgaaa
agcctcttcggtgacgatgacaaggagatgtgtgaggagagcgagatcattcctactttg
gaacctttgccacctcatgaggttcttggacatcagtctgtgtttatgaatgaaccgaga
ctgtctgacttcaagcaagttctcttgcgagaaggtatacaagctgaatttgtaggagga
gtgcttgtgtgcaacaacctggtggctgttcgcaggactgaaacggggcgcattggatta
gagggctgtctctgtcaggacttctacaggataagagaccttttgtacgagcaatacgct
attgtctaa
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integrated database retrieval system
