Pygoscelis adeliae (Adelie penguin): 103915277
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Entry
103915277 CDS
T06012
Symbol
SETX
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
padl03021
]
103915277 (SETX)
Enzymes [BR:
padl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103915277 (SETX)
5.6.2.5 RNA 5'-3' helicase
103915277 (SETX)
Transcription machinery [BR:
padl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103915277 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
Viral_helicase1
AAA_30
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
UvrD_C_2
SAS4
Motif
Other DBs
NCBI-GeneID:
103915277
NCBI-ProteinID:
XP_009320345
LinkDB
All DBs
Position
Unknown
AA seq
2621 aa
AA seq
DB search
MSTCRWCTPSGSDTTEFLKSYASKRLSLEDLEGSNDDLCYCLECVVEYHKAREKLPRLHE
VLWELETSRLVAHIEKSMRENAGDDDELLIVDENGVTQLSGYVGPDFENNLRVPLLEILK
YPYLLLHEKVSELCVEVLCRMEQSHDSFQVFEKYPGIYLFLVHPNEVIRRWAILAARNLG
KVDRDDYYDLQEVLTCLFKVIELGLFESPDIYSSSMIEKGKLILLPSHLYDTANYKNYWL
GICMLLTVLEEQAMESLLLGPDKQNDFMQSIFHTMEKEAADHSTDPFWPALNCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSEPESDYDDDMVTCSQIVYN
YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGRDMRVHHSTFLWFIPFVQSL
MDLKDLGVAYIVEVIHYLCSEIKDILNERIQQCDKISEFFLLILVSIIELHRNKKCLHLL
WISSQEWVEAVVRCAKLPAIAFTRCADKASGHYVRGSLAVSLQASNSVQHACVQLIRSLL
REGYQIGQHALCKKYLDKLNLLLRGSLSLGWQLNIQETQELQICLKQVIRNIKARALSTP
APVGNNANSTTLSTVSIKQEKSAHGDGYEVSVHGRDDLCSPFAGISKEGGDEDCQENPFP
RRKSAWEEECGDASKSSRSWTSAEGLLNIKKELNDLTTQEYVWPQNSLAAKVYGKVQENR
NNDLVAGKCDTDNQYFNPNSQRSDFRRGGELENKCEAGPITPMCLAAQARIGSPEHACSS
DVKESSMSPSSSLKLKVDAHRLTDLKNKVRKTEWLSKVLQPAKPRDLKNCSFATSASKAE
VEQPKLCTGYLCTSKDCHKHQGVNTVCENEISVDTPSSRSCESTQEKSVSSAFQSRLVPT
KQVSKETPLDCTSSSKNEPGMQESDDNSILFSGINDTLLKKVSTEEKSSSLLKSAFKKDT
DMQNSDQEQPNLNDLVKYDCKGQISETFGMDKTSANGRVPSSSENQRDISNPASQIRPLS
MKCESSDRLFQFSECFKRENNSVGKKGGDCVKTVSEDNALTDSQVDRELSKLSLAAYAKG
VNFPFDSSQESSVHHNVCDIKRKVKGAVRASNDGQSTKSPCDADCLDNQVIIISDSSDEE
EHVADKKETKTTNENTAPERQPSTSSCISDGDNKIETKTPSSPLSLEDCESQYFEFETEA
DVFSVWQDTQAYGMEATQEYKQDHVSVLADSSNSDGLLNDHTNEWGYDVDYVSDDTMEEE
ANLVEKQIENISHQKEADTTKEVTSSTLQESISKGNAKDQLENFADKGTVAKDFTPDSKL
TEPRASTSNISLASKLALKKNSTSPRKNTAKSEVARTIQRSPKKPPVLKTAQNKKLLQST
SKNSQPGRSMPAVVPPRKVRQCPAPASTVEKLGLKKAPRKAFELSQRSLESLAQLRSYGK
SAGRVGVTQKRKIKLIAPQSMSVKHNNKKLLACQDLQFLRQTRPKKSVRVKNVAGSSESR
NEKVSEVDAKPMKQKPESFELASVERSVENQREKKREETVCPSASERKFESLSVEEETCV
SKMHSSSDSNRKSEDNSMMVPPVPMDSSLSSAALVGHDKDEPSGKGCVVQPECEKATSKE
NGCKPNENGEDDDDDDLFLTQLDPVDMELCSEEESVQGSTIASKKTEEMGTTEGLQQGES
STIVKCKYKDCMEKVEKPGEYCSKHSATSSEADHSFAKPSLLPPSKTRKPSTAKIFSSAS
SSRNAAFSKDLEDVKKLPPASKSKVNAAKPAVVRPPNAKAVPIGNQTCRSPSFSNVPEPC
ISNNVLQSQYRQNDNASNISRRPGQEAHFPSFLGARQHDHNIFVNEVLKWTYEMFVNSSQ
FGPPSNLLQSVVASVPVQFQQYNDYFNTFFPLMMLNAFETLAQERTENQGAREKSYYFCL
QNFCAELNTADFTAHLQESDLAMQRHPKEDDLIFLVVQKKKDTFREESDMENHTVNHVGL
VKKFCRAPGCLTRQKEQHTVCHLSVQTRGNLSFFINKQVKCVVVGSLVTTHRTFKGLLLL
SRSPLAKPIINPSYDDFCPRDLPIASESAASDMNAYNENQKRAIETAYAMVKQHPGLPKI
CLIHGPPGTGKSKTIVGLLSRVLGENTRNEKATQKSNAKMKPNRFLVCAPSNAAVDELMK
KIIVAFKGKCQNRQEPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDQ
DIQKKKAALDQQLDMLSRQRAMHRCEKRESQMLNDEIGRLSKERQQLASQLKEVRRHSQK
VQAGIILESDIICCTLSTSGGSLLESAFCRQGLDPFSCVIVDEAGQSCEVETLIPLIHRC
NKLVLVGDPKQLPPTVKSVKAQERGYDQSLMARLQRHLEEQVQKNILRSLPVVQLTVQYR
MHPDICLFPSNYVYGRTLKTDKATEENRCSSEWPFQPYLIFDVRDGREERDSDSFSNPQE
VKLVMELIRTIKEKRKDLGLRRIGIITPYSAQKKKIQEQLDRVFKNNSPGEVDTVDAFQG
REKDCIIVTCVRANSTKGSIGFLASRQRLNVTITRARFSLFILGRLTTLMEQKSFRLYKC
ALSFAFAAASSVGXRFLLQWQQKLQIKAYEVCLVPVSPCDE
NT seq
7866 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgatggtgtacacctagtggttctgataccactgagttcctgaagagc
tatgcttctaaacggttgtccctggaagatcttgaaggatccaatgatgatctctgttac
tgcctggagtgtgtggttgaataccacaaagcgagggaaaaattgccaaggttgcatgag
gtcttgtgggagttggaaacctcccgtcttgttgcccacattgagaaatccatgcgggaa
aacgctggagacgatgatgagttgttaatagtggatgagaacggagtgacacagctgtct
ggttatgtgggcccggattttgagaataacctgcgagtgccccttctagaaatactgaaa
tatccatatctgctgctgcacgagaaagtcagtgagctgtgtgtagaagtgctctgtaga
atggaacaaagtcacgactcctttcaggtctttgagaaatatccaggaatttatctcttt
ttggtacacccaaatgaagtgattcgtcgatgggccatcctagcagcaaggaatttaggg
aaggttgatagggatgattactatgacttacaggaagtgctgacttgcttgttcaaagtt
atcgagttggggctttttgagagtccggatatttacagctcttcaatgattgaaaagggt
aaactcatccttctgccatctcatttatatgatactgctaactacaagaactattggcta
gggatttgtatgttgctaacagtgctggaagaacaagctatggagtccttgttactgggc
ccagacaaacaaaatgatttcatgcagtctatatttcacaccatggagaaagaagcagct
gatcattctactgaccccttctggccagcgctgaattgtttcatggttattttggatcag
ctcggatctaaagtgtggggtcagcttattgatcctgtccaagcctttcaaaccattatc
aacagtgtgagctacaacaatgaaataaaaaatatacgcagtagctttaagagaacaaaa
tctgaaccagagtcagactacgatgatgacatggttacttgcagtcagattgtgtataac
tataacacagaaaagcctcaaaaggatactggatggaagactgccatttgtccagactac
tgccccaacatgtacgaagatatgcagacactggctaatgtgcttcagtctgatattggc
agagatatgcgtgtccatcacagcacgtttctgtggttcatcccttttgttcagtcactt
atggatctcaaggacttgggtgtagcatatatagtagaggtcattcactacctctgctcg
gaaatcaaagatattctcaatgaaagaatccagcagtgtgacaaaatctctgaatttttt
ctcctgatcttggtgtccattattgaactacacagaaataaaaagtgcctgcatttgcta
tggattagctcccaagaatgggtggaagcagtggtgagatgtgctaagcttccagctata
gcatttacccggtgcgctgacaaagcatctggacactatgtgagaggttcattagcagta
tctttacaagcttctaactctgtgcagcacgcctgtgtgcagttgatacgcagccttctt
agagaaggctatcaaattgggcagcatgctctttgcaagaaatacctagacaaactcaat
cttcttctgcgaggaagtctatctttaggttggcagctgaacatccaggaaacgcaggaa
ttacaaatatgtttaaagcaagttataagaaatataaaggccagagcgctgagtacccct
gcgcctgtaggaaataatgcaaactctacaactttgtctaccgtttctataaagcaagag
aaaagcgcacatggtgatggatacgaggtgagtgtacatggcagagatgacctttgttca
ccatttgctggcatatcgaaggaaggcggagatgaagattgtcaagagaaccctttccct
agaagaaaaagtgcctgggaagaggaatgtggagatgcatctaaaagttcaagatcttgg
acatctgcagaaggcctcttgaatattaaaaaggaacttaatgacttgacaactcaggaa
tatgtctggccacagaactctttggcagcaaaagtatatgggaaagttcaggaaaacagg
aacaatgatcttgtggcgggtaaatgcgatacggataatcagtactttaatccaaattcc
cagcgttcagatttcagaagaggtggagagttggaaaacaaatgtgaagcaggacccata
acaccaatgtgtctggctgctcaagctcgtattggttctccagaacacgcttgcagctcg
gatgtaaaggaaagcagtatgtctcctagttcctctttaaagcttaaagtagatgctcat
agactcacagatttgaaaaacaaggtacggaaaactgaatggctctcaaaagtattgcag
ccagcgaagccacgcgacttgaaaaactgcagttttgcaacaagcgcttcaaaagcagag
gtagagcaacctaagctttgcactggctatctgtgtacaagcaaagattgtcataaacat
cagggcgtgaatactgtgtgtgaaaatgaaatctctgttgatactccatcttcaaggagt
tgtgaaagtacacaggagaaaagtgtcagcagtgcttttcaatccagactggtccccact
aaacaggtatcaaaagaaacaccactagattgcactagctcctctaaaaatgaacctggt
atgcaggaaagtgatgacaacagtattttgttttcagggattaatgacaccttactgaaa
aaagtatccactgaagaaaaatccagttcattgttgaagtctgcctttaagaaagacact
gacatgcaaaattcagaccaggaacagcctaatttaaatgacttggttaaatatgactgt
aaaggtcaaatttcagagacatttggtatggataaaacttcagcaaatggtcgtgttcca
tctagctctgaaaaccagagggatatatccaaccctgcttctcagatcaggccactgtca
atgaagtgtgaatcgagtgacaggttgttccaattttcagaatgtttcaagagagaaaac
aattcagtggggaagaaagggggggactgtgtgaagacggtttctgaagataatgcttta
acagactcccaggttgatagagaactcagtaaattatctttagctgcgtatgccaaaggt
gtcaattttccctttgattcaagccaagaaagctcagtacatcataacgtatgtgatatt
aaaaggaaagtgaaaggtgctgtaagagcttccaatgatggccaaagtaccaagtctccc
tgtgatgcagattgccttgacaatcaagtcattataatttcagactcttcagatgaagaa
gaacatgtggctgacaagaaggaaacaaaaacaacgaatgaaaatacggctcctgaaagg
cagccttcaacttccagctgcatttctgatggcgataacaaaatagaaacaaagacgcca
agctctcccttgtcactggaagactgtgagtctcagtactttgaatttgaaacagaagcg
gatgtcttttcggtttggcaagatactcaagcgtatggtatggaagcaactcaagagtat
aaacaagatcatgtttcagtattggctgatagtagtaattcagatggcttactgaacgat
cacacaaatgaatggggttatgatgtggattacgtaagtgatgataccatggaagaagaa
gcaaacttggtagaaaaacagatagaaaatatttctcatcagaaagaagctgatactaca
aaagaagtaactagttcaacattgcaagaatctattagtaagggaaatgcaaaagatcaa
ctggagaattttgcagacaaaggtactgttgctaaagacttcaccccggactcaaaattg
actgaacccagagcatctacatctaacatctcattagcttcaaagttggctcttaagaaa
aatagcacgagcccacggaagaatacagcaaaatctgaggtagcaagaactattcaaaga
agtcctaaaaaacctcctgttcttaaaacagcacaaaataaaaaactacttcaaagtacg
tcaaaaaattctcaacctggcaggtcaatgcctgctgtggttcctccaaggaaagttcgg
cagtgtcctgcaccagcatcaaccgtagaaaaacttggtctgaagaaggcaccccgcaaa
gcgtttgaattatcccagcgctctttagagagcctagctcaattgcgcagctatggtaaa
tctgcagggagagttggagttacacagaaacggaagattaaactaattgctcctcagagt
atgtctgtaaaacataataataaaaaattgctagcctgtcaagaccttcagtttttaagg
cagacgaggcccaaaaaaagtgtcagagtgaaaaatgttgcaggaagttctgagagtaga
aatgaaaaagttagcgaagtggatgcaaaacctatgaaacaaaagcctgaaagttttgag
ctggcatctgtcgaaagatctgttgaaaaccaaagagagaaaaaaagggaggagactgtt
tgtccctctgccagtgagagaaaatttgaaagcctctctgtggaggaggagacatgcgtc
tccaaaatgcatagttcttcagactcgaacagaaaatcggaggataacagtatgatggtt
cctcctgtacctatggattcaagtctctcttccgctgcccttgttggacatgataaagat
gaaccttcaggaaaaggttgcgttgtccagcctgagtgtgagaaggcaacttcaaaagaa
aatgggtgtaaaccaaatgaaaacggtgaagatgatgacgatgatgatctgtttttaact
cagttagatcctgtggatatggaattatgttctgaggaggaaagtgttcaagggagtact
atagctagtaaaaaaacagaggaaatgggtactactgaaggccttcagcagggcgaatcc
tcgactattgtgaaatgtaagtacaaggactgtatggaaaaagtggaaaaaccaggagag
tactgtagtaagcattcagccaccagctcagaagcggatcactcgtttgccaaaccttct
ctcctgccaccttctaaaacaagaaagccttccactgccaaaattttcagctcagcaagt
tcttcacggaatgcagccttcagcaaggatcttgaagatgttaaaaagctaccgccagct
tcaaaaagcaaagtgaatgcagcgaagccggcggtggtcaggccaccaaatgcaaaggct
gtaccgataggaaatcaaacgtgcaggtctccaagtttcagtaacgtacctgaaccctgt
atttctaataacgttctccagtcacaatatagacagaacgacaatgcttcaaatatttcc
agaaggcctggccaagaagcacattttccttcctttcttggtgctcggcagcatgatcat
aatatttttgttaatgaagtcctaaagtggacgtacgaaatgtttgtgaactccagccag
tttggacctccaagtaatctcctgcagtctgtagtagcctctgttcctgtccaatttcag
caatacaatgactattttaatacatttttccccttgatgatgctaaatgcctttgaaaca
ctggcacaagagcggacagaaaaccagggagcgagggagaagagttactacttctgctta
cagaatttctgtgctgaattgaatacagcagattttacagctcatcttcaagaaagtgat
ttggcaatgcagcgtcatccaaaggaggatgacttaatctttttggtggtccaaaagaaa
aaagacacctttagggaagaaagtgacatggagaaccatacagtgaatcacgttggtctt
gtgaaaaaattttgtcgtgcgcctggctgtttaactagacaaaaggagcagcatacagtc
tgtcatctttctgtgcaaactcgaggcaatttgtcattcttcataaataagcaagtgaag
tgtgtggtggttggctccctggtgaccacacaccgaacattcaaaggtctactactattg
agcaggagtcccctggctaaacccatcattaatccaagttacgatgacttctgtcccaga
gatttgcccatagcttcagaaagtgctgcgtcagatatgaatgcatacaatgaaaatcaa
aagagagctattgagacagcttatgccatggtaaagcaacatccagggctacccaagatc
tgcctcatccacggaccacctggaacagggaaatcaaaaactattgttggacttctgtct
cgtgttttgggagaaaacactaggaatgagaaagcaactcaaaaatcaaatgccaagatg
aagccaaaccgttttctagtttgtgcaccatcaaatgctgctgttgatgaactcatgaaa
aagatcatcgttgcatttaagggaaaatgccaaaacagacaggagcctttgggaaactgt
ggtgatatcaaattagtgcgacttggtgctgaaaaagcaatcaacagtgaagtccgggga
tttagcctggataagcaagttgaacacagaatgaaacgaaagccagctgactgtgaccag
gatattcagaagaaaaaagcagctctggatcaacagctggacatgctgtctcgtcagcgt
gccatgcacagatgtgagaagagggagagtcaaatgttaaatgatgaaattggcagactt
tcaaaggagagacaacagcttgcttctcaactaaaggaggttcggaggcactctcagaaa
gtacaggcaggtatcatcttggagtccgacatcatctgctgcacgctgagcacaagtgga
ggaagtctgctggaatccgctttttgtcggcaaggacttgatcctttcagctgtgtcatt
gtggatgaggcagggcagtcctgtgaggttgaaacactgattccactgatccatcgctgt
aataaacttgtccttgttggagatcccaagcagctccctcctactgtaaaatcagtaaaa
gctcaggaacgtggctacgatcagtccttgatggcacgcctgcagagacacctggaggag
caagtgcagaagaacattttacgaagcttgccggttgtgcagctgactgtgcagtacagg
atgcaccctgacatctgcctcttcccatccaattatgtttatggcaggactctaaagact
gacaaagcaacagaagagaacagatgttcttcagaatggccattccagccctaccttatt
tttgatgtcagagacggtcgtgaggagcgagacagtgactcttttagtaatcctcaggaa
gtgaagctggtgatggaattaattagaacaattaaagaaaaaaggaaggatctgggtctt
cgtcgcattggaataattaccccttacagcgcacagaaaaagaaaattcaagaacaactg
gacagagtgtttaagaataacagcccaggcgaagtggacacagtggatgcattccaggga
cgagagaaagactgcatcatagtgacgtgtgtccgggcaaacagcactaaagggtcaatt
gggtttctggcaagtcgtcagcgtctgaacgttacaattacccgagccagattcagcctc
ttcatccttggaagactgacaacactcatggaacagaagagctttcgtttatacaaatgt
gccttgagttttgcttttgctgctgcttcatcagttggantccgtttcttgttgcagtgg
caacagaaactgcagattaaagcctacgaggtctgtttggtcccagtgagtccatgtgac
gaataa
DBGET
integrated database retrieval system
