Pygoscelis adeliae (Adelie penguin): 103915757
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Entry
103915757 CDS
T06012
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103915757 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
padl03019
]
103915757 (CNOT6)
Enzymes [BR:
padl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103915757 (CNOT6)
Messenger RNA biogenesis [BR:
padl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103915757 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103915757 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
103915757
NCBI-ProteinID:
XP_009320945
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWTLTHLTALHLSDNSLSRIPSDIAKL
HNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGNPLT
QDILNLYQEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEPDRTRPTALFSVMC
YNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEILSCNADIISLQEVETEQYYSFFLVE
LKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGS
EAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGMEKQLVLVANAHMHWDPDYSDVKL
VQTMMFLSEVKNIIDKASRSLKPGVSGELGTIPLVLCADLNSLPDSGVVEYLSTGGVETN
HKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKGIIDYI
FYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLELLLPFLPPVNGIHL
PGRR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtacacaattatgtcctcagaggaagcagccaacggaaagaaatcacactgggcagag
ttggaaataagtgggaaagtgagaagcttaagttcgtcattgtggacactgacccatttg
acagctttgcatctcagtgacaattccttatcccgtattccttcagacattgctaagctt
cacaatctggtatatctggacctgtcctctaataaaattcgcagtttaccagcagagctc
ggaaacatggtgtcactcagggaactacatttaaataacaacctgttacgagttttacct
tttgagctgggaaaactgttccagttacagactttgggtctgaaaggaaatccacttaca
caggatattctgaacctttatcaggaaccagatgggacgcgcaggctactgaactatttg
cttgataatttggcaggtactgcaaaaagaatttcaacagaacaaccacctccaagatct
tggattatgttgcaagaaccagaccgtacaagaccaacagccttgttttctgtcatgtgt
tacaacgtgctctgtgataaatatgctacccggcagctgtatggctattgtccatcttgg
gcattgaactgggaatacagaaaaaaagccattatgcaggaaatcctgagctgcaatgct
gacatcataagtcttcaggaggtcgaaacggaacagtactacagttttttcctggtagaa
ttgaaagaacgtggctacaatggattcttcagtccaaaatctagagctaggacaatgtca
gaacaggaaagaaaacatgtcgatggttgtgcaatatttttcaaaacagaaaaatttact
ttggttcaaaaacatactgttgagttcaatcaactagctatggcaaactcagaaggttca
gaagctatgctgaacagagttatgacgaaagataatattggcgttgctgtattgttagaa
ctgcgaaaggaattgatagaaatgtcatctggaaagccacatcttgggatggaaaagcag
ctagttcttgtagctaatgcacatatgcattgggacccagattattctgatgtgaagctg
gttcagactatgatgttcctgtccgaggtaaagaacattattgataaagcctctcgtagt
ctcaaacctggtgtttcgggagaacttggaaccattccacttgtactgtgtgcagatctc
aattctctgccagactctggtgttgttgagtacttgagcactggtggggtggaaacaaac
cacaaagattttaaggaactgagatacaacgaaagtcttactaacttcagctgtaatggg
aaaaatggaacaacaaatggaagaattacacatggtttcaagttgaagagtgcctatgag
aacggtctaatgccttatacaaattacacatttgacttcaagggtattattgactacatc
ttctactctaaacctcagctaaacatacttggcattcttggacctttggatcatcattgg
ttaatagagaacaatataagtggttgtccacatccactcatcccttctgaccacttctca
ctttttgcacaactggagcttttgctgcctttcctgcctcctgtaaatggaatccatctc
cctggcaggaggtag
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