Pygoscelis adeliae (Adelie penguin): 103916727
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Entry
103916727 CDS
T06012
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103916727 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
padl03041
]
103916727 (DDX5)
03009 Ribosome biogenesis [BR:
padl03009
]
103916727 (DDX5)
Enzymes [BR:
padl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103916727 (DDX5)
Spliceosome [BR:
padl03041
]
Complex A
U1 snRNP components
U1 related factors
103916727 (DDX5)
Complex B
103916727 (DDX5)
Ribosome biogenesis [BR:
padl03009
]
Eukaryotic type
Pre-60S particles
Helicases
103916727 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
103916727
NCBI-ProteinID:
XP_009322055
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MGVSLGWETILIVRFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQE
HPDVVRRTVQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQ
AQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQ
QVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRR
CTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHIN
IGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKM
RRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNS
SEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSG
RSRGDRRDRYSAGKRGGFSSFRERENFERNYGALGKRDFGAKTQNGAYSAQSFSNGTPFG
NGFAAAGMQAGFRAGNPAGAYQNGYDQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPM
PTSYSQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgtcacttgggtgggaaaccattttgattgtgcggtttggagccccccgtttt
ggaggaagtagaggtggacctctctctgggaagaaatttggaaaccctggggaaaaactt
acaaaaaagaaatggaatttagatgagctgcccaaatttgagaagaacttctatcaagaa
catcctgatgtagttagacgtactgtgcaagaagttgagcagtacagatcaagcaaagaa
gtcacagttaggggccataactgtccaaaaccgattataaacttctatgaagctaacttt
cctgcaaatgttatggaagtaattcagaggcagaacttcactgaaccaactgctattcaa
gcacaaggttggcctgttgcattgagtggattggatatggttggagtggcacagactgga
tcagggaaaacgctgtcttacttgttgcctgctattgtgcatataaatcatcagccattc
ctggagcgaggagatggacctatttgtcttgtgctggcaccaactcgtgaactggctcaa
caagtgcagcaggtagctgctgaatatagcagagcatgccgtttgaagtctacgtgtatt
tatggaggtgctccaaagggaccacaaattcgtgacttggaaagaggtgtggaaatctgc
attgcaacacctggaagacttatagacttcttagaagctggaaagaccaatctcaggagg
tgtacttaccttgtccttgatgaagctgacaggatgcttgacatgggatttgaacctcag
atcagaaaaattgtggatcagataagacctgacaggcaaactctgatgtggagtgccaca
tggccaaaggaagtaaggcagctggctgaagactttttgaaagaatatgtacacatcaac
attggtgcgttagaactaagtgcaaaccacaacattcttcagattgtggatgtgtgtcat
gatgtagagaaagatgacaagcttattcgtttgatggaagaaataatgagtgagaaggaa
aataaaacaattgtttttgtggaaaccaaaagacggtgtgatgatcttaccagaaaaatg
aggagagatgggtggccagcaatgggtattcacggtgataaaagtcagcaggagcgggac
tgggttctaaatgaattcaaacacggaaaagcaccaatcctgattgctacagatgttgca
tccagaggtctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcc
tcagaggactatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagca
tacacattctttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgg
gaggctaatcaagccatcaaccccaaattgcttcagttgattgaagacagaggttcaggt
cgttcccgaggtgatcgacgtgacagatattctgcgggcaaaaggggtggatttagtagt
tttagagagagggagaactttgagagaaactatggtgcactaggaaagagagacttcgga
gcaaaaactcaaaacggggcctacagtgcccaaagtttcagtaatggaactccttttgga
aatggctttgcagctgcaggcatgcaggctggcttcagggctggtaaccctgcgggagct
taccagaatggctatgatcagcagtatggaagtaatattgcaaatatgcacaatggcatg
aaccaacagcagtatgcatatcctgccactggtgctgctcctatgataggttacccaatg
ccgacaagttattctcaataa
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integrated database retrieval system
