Pygoscelis adeliae (Adelie penguin): 103917623
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Entry
103917623 CDS
T06012
Symbol
CIITA
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103917623 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
padl01001
]
103917623 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
padl04054
]
103917623 (CIITA)
Enzymes [BR:
padl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103917623 (CIITA)
Protein kinases [BR:
padl01001
]
Serine/threonine kinases: Other
TAF1 family
103917623 (CIITA)
Pattern recognition receptors [BR:
padl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103917623 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
Motif
Other DBs
NCBI-GeneID:
103917623
NCBI-ProteinID:
XP_009323085
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MNLFKEILPRVRKILSTATASDDHALLNLMLKEDVISKEYHQALLHEKDREDLARKISLT
FVEKWDLYLNTLVPLCCLNLYGSKPQNMTDNEPTGSKYTSDSKRQIMDSAFVSENGYLDL
LHSDIDPLHLYTFLDPKSSGNEEGDFPADPEVDASNYDQFSNTDFLCTMENGENGDELYL
CSNTIEAYARIAELAEYVLKDPQEKQVEDTFAGNLILDEMAAENTEKFIDIKMQKCHKRT
FSGSAESFSDASEPKYKKIVEVPAVSAGNGSFLAMPLNTHPASSTSLTNQHMSLSVPATN
PLERSFVIPGFSAPLIPECLPVGVKGSQENTGFADPPQQILNFVLGNGTSHVVIYPVLTS
STETLISPSFPDSLCGLEMFKEVRVPIIPSEEPFKRPKPVEAFCTSLMDYFQDVCKSVAM
EREVTLDDLFIDGTLVQSQTETKTGKNSVKAMEKELVTCSLQGKEKAALKRSQIFQIPGS
KGLETKVIVGLGKGGLGNTFVLKKILVQKICQDWSNGEFSQFEFVFWFDCKQISLPEKRY
SLKDLLLEFFVKPQEGSKEIFEYILQNPAKVLLVFDGFEGLCDHENFPRCSASQPEKDLC
SVKELLSGLIQKKILNGCTLLLTARPKDKVYQYASKVDKTIEIVGFSTWQREIYITKYFK
GLPYCDNALKLIKECEYLFSHCYSPVMCRFVCFLCETVLEIGDKSLPSTLTTVFLKFVQQ
KVIPMQTDVTAMQNQESLATLARIAWYLGEKHQSAMKSYDLPSKEVKEFALKYGFFLPFA
FPRHSDSGEEEFGSTFSDFVIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKPYNWLDL
LPRFLAGLLFLQDDPYFCSLSNKDVKQSTRKQKTLLKYIRRLQINELCPERLLELLHCIY
ETQSNYLLQHVALRLKPDLSFLGIVLTPPDVHVLHSILKRSTKEFSLDLRNSSIDMQGLK
DLVGLKNVASFRASLSDTVGLWKSLEQTKDYELLRASTEKFVLDPFKAKTMKDVSDLSDL
VEMQEKMINCVQDVSGCSSYEIPAIKIPAIKNLRKLEFALGPVCGLQGFLKLVEILAAFP
SLQHLE
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctttaaggagatcctgcctagagtaaggaagattctttcaactgctacagct
tctgatgaccacgcattgcttaacctcatgctgaaagaagatgtgatatccaaggagtac
catcaagccttgctccatgaaaaagacagagaggacctcgcaaggaagatatctctgaca
tttgtggaaaaatgggacctgtacttgaacactttggttcccctctgttgtttaaacctc
tatggcagtaagcctcaaaatatgacagataatgagccaacaggaagcaagtacacttct
gacagcaagagacaaatcatggattcagcatttgtgtctgaaaatggctaccttgattta
ctgcacagtgatattgatccattgcatctgtatactttccttgatcctaagtcatctgga
aatgaagaaggtgacttccctgcagatcctgaagttgatgccagcaactatgatcagttc
agtaatacagatttcctgtgtacgatggaaaatggtgaaaatggggatgaattgtatctc
tgttccaacaccatagaagcttatgctagaatagctgaattagcagaatatgtgctcaaa
gatccgcaggagaagcaggtggaagacacttttgcagggaaccttattttggatgaaatg
gctgctgaaaacactgagaaatttattgacataaagatgcagaaatgtcacaaacgaacc
ttctcaggctctgcagagagcttctctgatgcttcagaacccaaatacaagaaaattgtg
gaagtccctgcagtgtctgcagggaatggcagtttcttagctatgcctctcaacacccat
ccagctagctccacctcactaactaaccagcacatgtccctttctgttcctgctaccaat
ccgttggaaagaagtttcgtaattcctggattttcagcacctttgattccagagtgtcta
cctgttggtgtgaaaggaagccaagagaatacaggctttgcagatcctcctcagcagata
cttaactttgttcttggaaatggcacatctcatgttgtaatatatccagtgctgacttct
tccacagaaacactgatatccccaagttttccagatagtttatgtggtttagaaatgttc
aaagaagtccgagttcccataattccttctgaagaacctttcaaaagaccaaagccagtg
gaagctttctgtacatcacttatggattatttccaagatgtgtgcaaatctgtggccatg
gagcgtgaagtaactcttgatgacctgtttattgatgggacacttgttcaaagccaaact
gaaaccaagactgggaagaacagcgtaaaagcaatggaaaaggagctggtaacttgcagt
ctgcaagggaaggaaaaggcagcccttaaaagaagccaaatatttcaaatcccgggaagt
aaaggcttagagactaaagtgattgtggggctgggaaaaggaggactgggcaacacattc
gttttaaaaaaaattcttgttcagaagatctgccaggattggtccaatggagagttttct
caatttgaatttgtattttggtttgactgcaaacaaataagcttgcctgagaagcgatac
agcctgaaggatctgcttcttgaattttttgtaaaacctcaagagggaagcaaagagatc
tttgagtatatattgcaaaatcctgctaaagtccttctggtttttgatggttttgaaggg
ttgtgcgatcatgagaatttccctcgttgctcagccagccagcctgaaaaagacttgtgc
agtgtaaaggagctgctttcaggactcatccaaaaaaagatactcaatggttgtacttta
ttacttacagcaagaccaaaagacaaggtgtaccagtatgcgtccaaagtggataagact
attgaaatagtaggattttccacttggcagagagaaatatacataaccaaatacttcaaa
ggattaccctactgtgataatgcactgaaattaatcaaagagtgtgagtacttgttcagt
cattgttacagccctgttatgtgtagatttgtttgttttctctgtgagacagtacttgaa
ataggagacaaaagccttccttcaactcttactacagtcttcctgaaatttgttcagcaa
aaggtaatacctatgcaaacagatgttacagccatgcaaaatcaagagagtcttgctacg
ctagcccgtatagcctggtatcttggagaaaagcaccaaagtgccatgaaaagttatgat
cttccttctaaggaagttaaagagtttgctcttaaatatggatttttcctgccatttgcg
ttccccagacattcagatagtggagaagaggaatttgggagtacgttctctgattttgtc
attcagaatttcttgggtgcgcttcaccttatgttagcagaagagatcaaggataaaagt
ctaacaaagtacctgtcttttccatccaagaagaaaaaaccttataactggttagattta
ctgcctcgatttttggctggattattgttcctccaggatgacccctacttctgctccctt
tcaaataaggatgtaaaacaatcaaccaggaagcagaaaacactcttgaaatatattaga
agactgcagataaatgagctctgtccagagaggttactcgagcttttacattgtatttat
gaaacacaaagcaattatcttttgcagcatgtggccttaaggctcaagccagacctgtct
tttctgggcatagttcttacaccacctgatgtccatgtcctgcactctattttgaaaagg
tcaacaaaagagttttccttggatttgcgaaacagcagcattgacatgcaagggctaaaa
gacttggttggcctaaagaatgtggcgtcgttcagggcctccctcagtgatacagtcggg
ctctggaaatctttagaacaaacaaaagactatgaactgctgagagcatcaacagagaaa
tttgttcttgatccctttaaggcaaagacaatgaaggacgtcagtgatctttcagacctt
gtagagatgcaagagaagatgatcaattgtgtgcaagatgtatctggttgcagcagctat
gaaattcctgccatcaaaattcctgccatcaaaaacctcagaaaactagaatttgcgctg
ggtccagtatgtggcctacagggattcctaaaactcgtggaaattcttgcagcatttcca
tcacttcagcatttagagtga
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