Pygoscelis adeliae (Adelie penguin): 103918150
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Entry
103918150 CDS
T06012
Symbol
SCN1A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
padl04040
]
103918150 (SCN1A)
Ion channels [BR:
padl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103918150 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
SieB
New_glue
Lustrin_cystein
FraC
Motif
Other DBs
NCBI-GeneID:
103918150
NCBI-ProteinID:
XP_009323676
LinkDB
All DBs
Position
Unknown
AA seq
2018 aa
AA seq
DB search
MEQSVLVPPGPDSFQYFTRESLAAIEQRIAAEKAKNSKQDRKDNDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDMDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTLETNITSQLNSTI
GENGTLINSTVTPFDWKGYIEDESHFYFLEGQNDALLCGNSSDAGQCPEGYTCVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEAAQAAAVAAAAVTASAESREPS
AGGEAEGLSESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRR
KGFRLSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFA
DDEHSTFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVV
SLVGGPSVPTSPVGQLLPEVIIDKPATDDNVRKFXIAXASWPFLTAPASVFYRMEPLAML
PGLSSSMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMD
PFVDLAITICIVLNTLFMAMEHYPMTDEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYY
FQEGWNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV
GALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFRV
LCGEWIETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDDN
EMNNLQIAVARMQKGIDYVKRKAREFIQKAFVKKQKALDEIKPLEDLNNKNSCISNHTTV
ELSKDHDYIKDANGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENL
NTEEFSSESDLEESKEKLNLSSSSEGSTVDIGLPAEEQPEAEPEEAQEPEACFTEGCVRR
FKCCQVSIEEGRGKQWWNLRKTCFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTI
KTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSE
LGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKFYYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQV
ATFKGWMDIMYAAIDSRDVLQQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQ
QKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISIM
ILICLNMVTMMVETDDQSKEMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFD
FVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLP
ALFNIGLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDG
LLAPILNSGEPDCDPNKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILEN
FGVATEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPKPNKVQ
LVAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITT
TLKRKQEEVSAVIIQRAYRRHLLKRTVKQASFIYNKNKTEGGTGQGMKDEILIDKLNENS
FTEKTDITASTAVCPPSYDRVTRPVKEKHEKEDKDVHK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggaccagacagcttccagtacttcactagagag
tctcttgcagctattgaacaacgcattgctgcagaaaaggctaagaattctaaacaagat
cgtaaagacaacgatgatgaaaatgggccaaagccaaacagtgatttggaggcagggaaa
acacttccgtttatatacggcgacatacctccaggaatggtgtctgagcccttggaagac
atggacccatattacatcaataaaaaaacctttatagtattgaataaagggaaggcaatc
ttccgattcagtgccacctctgccctgtacattttaactcccttcaatcctcttagaaaa
atagctattaaaattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccggactggacaaagaatgtagagtat
acattcactggaatttacacatttgagtcactcataaaaatcattgcaaggggcttttgc
ttagaagattttacttttcttcgagatccatggaactggcttgatttcactgtcattacc
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaatcccaggcttgaagactatcgtgggagcc
ctaattcagtctgtgaagaagctctcggatgtaatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagaaaattttactctggaaacaaatattacttcccagctaaacagcaccata
ggtgaaaatggtacattgattaattcaacagtgactccatttgactggaaggggtatatt
gaagatgaaagtcatttttattttctggaagggcaaaacgatgctctgctttgcggaaat
agttctgatgctgggcagtgcccagaaggatatacatgcgtgaaagctggtagaaacccc
aattatggctacacgagttttgacaccttcagctgggctttcttgtcactatttcggttg
atgactcaagacttctgggaaaacctttatcaattgacactgcgtgctgctgggaaaaca
tacatgatattttttgttctggtgatttttctgggttctttctacctgatcaacttgatc
ttggctgtggtcgccatggcctatgaagaacagaatcaagcaaccatggaagaagcagag
cagaaagaggcagaatttcaacagatgctggaacaactgaagaagcaacaagaagcagct
caggcagcagcagtggcagcagcagcagtaacagcatccgcggagtccagggagcccagt
gctgggggagaagcagaagggctctcagaaagttcctcagaggcatcaaaattgagctca
aagagtgcaaaagagaggagaaatagaaggaaaaaaagaaaacagaaagaacaatctgga
ggagaggaaaaagatgaagatgaatttcacaagtctgaatcagaagacagcatcagaagg
aaaggtttccgattatctattgaaggcaatagattgacatatgaaaagaagtattcttct
ccacatcagtctttgctgagcattcgaggctccctattttctccaaggcgcaacagcaga
acaagtcttttcagcttcagaggtcgagcaaaggatataggatcagaaaatgactttgct
gatgatgagcacagcacttttgaagacaatgatagccgaagagattctctctttgtgccg
cgcagacacggtgaacggcgcaacagtaacattagtcaggccagtaggtcatccaggatg
ctggcagtgtttccagtgaatgggaagatgcacagcactgtggattgcaatggggtggtt
tccctggttggtggaccatctgttcctacatcgcctgttggacagcttctgccagaggtg
ataatagataaaccagctactgatgacaatgtaagaaagttttaaatagcttaggcatcg
tggccttttcttactgcaccagccagtgttttctacagaatggaacccttggcaatgctt
cctggtttgtcaagctccatgagtattgctagcatcctcacaaacactgtggaagaactc
gaagaatcaagacagaaatgcccaccatgttggtataaatttgcaaatattttcttgatc
tgggactgcagtccgcattggttaaaagtaaaacatatcgtcaacttagtggtaatggac
ccatttgttgacctggctattacaatttgcattgttttgaatacactctttatggctatg
gaacattatccgatgaccgatgaattcaataacgtactttcagttggaaatctggtcttc
actggaatcttcacagcagaaatgtttctcaagataattgcaatggatccttactattat
ttccaggaaggctggaatatttttgatggttttattgtaacccttagcttggttgagctt
ggtcttgcagatgtggaaggactgtccgttcttcgatcattcagattgttacgagttttc
aaattggcaaaatcttggccaactctaaatatgctgataaaaattattggtaactctgtg
ggagctttgggtaatctgactctggtcctggccatcattgtcttcattttcgctgtggtt
gggatgcagctgtttgggaaaaactacaaggaatgtgtctgcaaaattgcaagtgactgt
gtacttccacgctggcacatgcaagatttttttcactcttttttgatcgtatttcgagtg
ctgtgtggagaatggatagaaacgatgtgggactgcatggaggttgctggccaagccatg
tgccttacagtcttcatgatggtcatggtgattggaaacctagtggtactgaacctcttt
ttggccttgctcttgagctcatttagtgcagacaaccttgccgtgacagatgatgacaat
gaaatgaataatctccaaattgctgtagcaagaatgcagaagggcatagattatgtgaaa
agaaaagcacgcgaattcatccaaaaagcttttgttaaaaaacaaaaagctttagatgaa
atcaaaccacttgaagatttgaacaacaaaaatagctgtatttctaaccatacaaccgtg
gaactaagcaaagaccatgactatattaaagatgcgaatggaacaactagtggcataggc
acaggtagcagtgtggaaaaatacataattgacgaaagtgattacatgtcattcataaac
aacccaagcctcactgtgacagtgcccattgctgtgggtgaatctgactttgaaaatcta
aacacagaggaatttagtagtgaatcagacctggaagaaagcaaagagaagttaaatttg
tctagttcatctgaaggtagcacagttgatattggacttcctgcagaagagcaaccagaa
gctgaacctgaagaagcccaggagccagaggcctgcttcacagaaggctgtgtacgaagg
ttcaagtgctgtcaagtaagtatagaagaagggagaggaaagcagtggtggaaccttaga
aaaacctgcttcaagattgtcgaacacaactggtttgagactttcattgtctttatgatt
ctcctcagtagtggagctctggcttttgaagacatttatattgaacagcgcaaaactatc
aagaccatgctggaatatgctgacaaggtcttcacttacatcttcattctggaaatgctg
ctgaagtgggtggcctatggctatcaaacatactttactaatgcctggtgctggctggac
ttcctgattgtcgatgtctctttggttagcttaacagcaaatgcattgggttactctgaa
cttggtgccattaagtcccttaggacactaagagctttgagacctctaagagctttgtca
cgatttgaaggcatgagggtggttgtgaatgcccttttaggagcaattccatccatcatg
aacgtgcttctcgtttgtcttatattctggctaattttcagcatcatgggagtaaatctg
tttgctgggaagttctactactgtgttaacaccacaactgatgaaaggtttgaagtcgac
caaatcaacaattttagtcagtgcgaggaactcataaaaaacaatcaaagtgcccgatgg
aaaaacgtgaaagtaaactttgataatgtaggatttgggtatctttctttacttcaagta
gctacatttaaaggctggatggatattatgtatgcagctattgactcaagagatgtatta
cagcaacctaagtatgaagacaacctgtacatgtatttgtattttgtcatctttatcatt
tttgggtcttttttcaccctgaacctgttcattggtgtcattattgataacttcaatcag
caaaaaaagaagtttggaggtcaagacatatttatgacagaagagcagaagaaatactac
aatgcaatgaaaaagctgggatccaaaaaaccacaaaaacctataccaagaccagggaac
aaattccaaggcatggtctttgattttgtgacgcagcaagtatttgacatcagcatcatg
attcttatttgtcttaacatggttaccatgatggtagaaactgatgaccagagtaaagag
atggaaaatattttatactggataaacctggtgttcattgtccttttcactggagaatgt
gtcctgaaattaatttcacttcgccattactatttcactataggctggaacatttttgat
tttgtagttgtcattctctcaatagtaggtatgtttttagccgagatgattgaaaagtat
tttgtgtcccccacattattcagagtcatccgacttgccagaatcggtcgaattctgcgt
ctcattaaaggcgctaagggaatccgcactctgctttttgctttgatgatgtctcttcct
gctttgttcaacattggtctgctgctgttcctggtcatgtttatctatgcgatatttggc
atgtccaactttgcctatgttaagagggaagctgggatcgatgacatgttcaactttgaa
acgtttggcaacagcatgatctgcctatttcaaattaccacatctgctggctgggatggt
ttgctagccccaattcttaacagtggggagccagactgtgaccctaacaaagctcatccg
gggagctccgtgaaaggcgactgcggcaacccttccgttgggattttcttctttgtcagc
tacattatcatatcatttctggtagtggtgaacatgtacattgctgtgattttggagaac
ttcggtgttgccactgaggaaagtgctgagcccttgagtgaggatgactttgagatgttc
tatgaagtctgggagaagtttgatcccgatgcaacacaattcatggaatttgagaaattg
tctgattttgcagcagcacttgagcctcctcttcatctacccaaaccaaacaaagtccag
cttgttgcaatggatctgcccatggtaagcggggacagaattcactgccttgacatcttg
tttgctttcacaaagcgtgttttgggggaaagtggggagatggatgccctcagaatacag
atggaagatcggtttatggcatccaatccttcaaaagcttcctacgaaccaattacaacc
acgttaaaacgaaaacaggaggaagtatctgctgtcattattcaacgggcttatagacgt
caccttttaaaacgaacagtaaaacaagcttcctttatctacaacaaaaacaaaaccgaa
ggagggactggtcagggtatgaaagatgaaatccttattgacaagttaaatgaaaactca
tttacagagaaaaccgatataactgcatcaacagcagtttgtccaccttcttatgaccgt
gtaacaaggccagtcaaagaaaagcatgaaaaggaagataaggatgttcataaataa
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integrated database retrieval system
