Pygoscelis adeliae (Adelie penguin): 103920223
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Entry
103920223 CDS
T06012
Symbol
COL4A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl04510
Focal adhesion
padl04512
ECM-receptor interaction
padl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103920223 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103920223 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103920223 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
padl04147
]
103920223 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
padl00536
]
103920223 (COL4A6)
Exosome [BR:
padl04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103920223 (COL4A6)
Glycosaminoglycan binding proteins [BR:
padl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103920223 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103920223
NCBI-ProteinID:
XP_009326182
LinkDB
All DBs
Position
Unknown
AA seq
1675 aa
AA seq
DB search
MGLKKLLFIANAAQGGKKYYSGPCGGRDCSAGCKCFPEKGARGRPGPIGLQGPIGAPGFT
GPEGLPGAKGERGAVGPPGPAGQTGDKGPMGVPGFQGINGIPGHPGQSGPRGLPGLDGCN
GTTGSPGVSGPDGFPGLPGLPGHPGPKGLKGEPVFAQGSLKGMKGENGLPGLDGISGPKG
FPGPIGSAGPIGLPGLQGPMGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGI
LEFMGFPKGKQGEKGDPGPQGFPGDKGLPGIPGFGGVGEKGEKGVPGLPGGRGLLGLDGS
DGIPGRKGHPGIPGYPGLDGVDGIKGELGDIGPPGPPIIIDREGVVISGAPGDPGNPGIS
GPPGDEGISGLPGLPGAPGFPGLERDGMGPGGSPGIPGAKGEVGEPGRGAIGLPGTRGRD
GLPGLPGAPGLPGSPGPSFPPDTILDGRTGAPGEPGQRGLPGALGPKGYKGEAGDCACDG
GVTRAGLKGISGPPGPSGSPGVPGIKGIGGDPGTVGAPGLRGPPALAGQQGLPGLKGEKG
DSSYATGRGARGDRGATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEKGLPGL
PGSKGHRGETGSPGIGYPGPSGVRGPSGDPGMDGFPGQAGLPGPPGITLPCIVPGAYGPP
GIPGFPGLPGPKGSKGFPGIPGQPGLHGSKGQPGSPGIIGLQGQPGFPGPRGEQGSQGLP
GLDGTDGLPGKMGASGLAGTKGAPGEVFGAESGALGERGRPGLPGDKGLTGDLGFPGPKG
LDGRPGLLGIKGEQGNPGYSGVPGLRGPPGPGGPFGVKGKPGPLGSVGLAGAPGCQGLPG
AKGLTGDVGPQGPAGMKGFPGLEGAPGSPGERGFLGPPGPFGQDGHPGFSGPKGEKGSSG
LLGFPGMPGLSGVPGVNGFKGTPGTAGEQGSPGVLGLQGQKGDRGDVGPPGLPVLGPPEQ
ALQFKGNKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGPIGSASKERGFRGDPGFPGPP
GQPGLPGQQGTHGIIGFPGMPGERERGXIPSXGSDGITGTLGFPGPIGLPGPKGDQGEPA
GISGIAGAKGERGDPGFPGERGREGLKGEPGYPGNTGVNGLKGSPGDLGQEGPAGIPGNA
GLRGIPGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEAG
LKGPAGLPGPKGEGGSPGLGRGALGFPGPKGSAGDMGPPGPVGLPGLPGTPGASLPSDIR
GRPGDAGHPGTDGSSGLPGPPGPRGPSGPASDQGDTGTPGFPGVLGLRGIKGDVGPTGPI
GLPGASGFKGVRGDPGLMGMPGKDGPPGDPGYPGLKGEMGHRGLPGQQGAPGTTPQPEEI
TAPAGLPGLPGIDGVPGFDGDPGFQGPAGKPGTKGLPGRSGLKGRDGLPGSPGIAGDPGP
SGAPGPQGFEGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCL
PRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSVQIPQYISRCSVCEAPSQ
AVAVHSQDITIPQCPVGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIEC
QGARGTCHYFANKYSFWLTTVEQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaaaaagctccttttcattgcgaatgctgctcagggtggaaagaagtattac
agtgggccatgtgggggccgtgattgcagcgctggatgcaaatgttttccagagaagggt
gcgcggggtcgaccaggaccgattgggcttcaaggaccaataggtgcacctggatttact
ggcccagaaggtttgccgggagcaaaaggtgagagaggagcagtgggcccccctggacca
gctggacagacaggcgacaagggcccaatgggagttccaggatttcaaggcataaacggg
atcccaggtcaccctgggcaatctggacctagaggtctgcctggcctcgatggctgcaat
ggtaccactgggagtcctggcgtttctggaccagatgggtttcctggcctacctgggctg
cctggtcatcctggcccaaaaggccttaaaggagaacctgtttttgctcaaggcagtctt
aaaggaatgaagggagaaaacggtcttcctggattggatggaatttctggcccaaaaggt
tttccaggtccaataggttctgcaggccctataggattaccaggtttgcagggtccaatg
ggtccccctgggccaccgggtccaaaaggtaacatgggattaggctttcaaggagagaaa
ggagaaaagggcgatgtagggctgcctggccctccaggtcccccaccatccactggaata
ctggaattcatgggatttccaaaagggaagcaaggagaaaagggtgatcctggccctcaa
ggattccctggagacaaaggattgcctggcataccgggctttggaggtgttggagaaaaa
ggagaaaaaggtgtacctggcttaccgggtggcaggggtcttttgggactggatggatct
gatgggattccagggagaaagggtcatccaggtattccaggctatccaggactggatgga
gtcgatggcataaagggtgaattaggtgacatcggtcccccaggccctcccatcattatt
gacagggaaggtgtagtcatttcaggtgccccaggtgaccctggaaacccgggaatatct
ggtcctccaggagatgaagggatcagcggtttaccaggccttccaggagctccagggttt
ccaggcctggagagagatggaatgggccctggagggtctccaggtattccaggtgcgaag
ggtgaagtgggagaaccaggaagaggagcgattggattaccaggcactcgcggcagagat
ggtttaccgggtctgccaggagcaccaggattgcctggttcaccaggcccttcattcccc
ccagacacgatcctggatggaaggactggggccccaggggagcctggacaaagagggctg
ccaggagctttgggtccaaaggggtacaaaggagaggcaggtgattgtgcttgtgatgga
ggagttacaagagctggtctaaaaggcatctcaggtccaccaggtccatcgggaagccct
ggtgtgcctgggattaagggcattggtggagacccaggcactgtgggcgcaccaggactg
cgaggccctccggctttggctggtcagcaaggtcttccaggccttaagggagaaaaaggg
gattcatcctatgctacaggcagaggtgctcgtggggaccgtggtgcgacagcacccaga
ggaccttcaggcatcccgggaacccctggcagggatggacttccaggcttgccaggccca
ccaggccctccaggtgatggtgggctaggtttcccaggtgaaaaaggactgccaggatta
cctggctccaagggccatcgtggagaaactggttctcctggcattggatatccaggtcct
agtggagttcgtgggccatcaggtgacccaggaatggatgggtttccagggcaagcaggt
cttccaggccctccaggtatcaccttgccctgcatagttcctggagcatatggtccccca
gggattcccggctttccaggactgccaggtcccaaaggcagcaaaggctttcctggcatt
ccaggccaacctggattacatgggtcaaaaggacagccagggtctccaggaataataggc
ttgcaagggcaacctggtttccctgggcctcgaggagagcaagggtcacaaggacttcca
ggactggatggaacagatggtttgcctgggaaaatgggtgcttcaggcttagctggaaca
aagggagctcctggagaggtatttggtgctgagagtggagccctgggagagcgtggccga
cctggactcccaggtgataaagggcttacaggtgatcttggatttccaggaccgaaaggg
ttagatggaagaccaggcctcctaggaattaaaggcgaacagggtaatccaggatattcg
ggtgtccctggattgcgaggacctcctggtcctggaggtccttttggcgttaagggaaaa
cctggacccttggggtcagttggccttgcaggagcaccaggctgtcaaggacttcctgga
gccaaaggcttgactggagatgtaggtccacaaggccctgctggtatgaaaggcttccca
ggtcttgaaggtgctccaggatctcctggggaaagaggattcttagggccacctgggcct
tttggtcaagatggacatccaggtttctcagggccaaaaggcgagaaagggtcttctggc
ctgcttggtttccctggcatgccaggcctgtctggtgtccctggagtgaatgggtttaag
ggaactcctggcacagctggagaacaagggagccctggagttctgggactccaaggtcaa
aaaggtgatagaggtgatgtaggtccacctggtcttcctgttcttgggcctccagaacag
gcactgcaattcaaaggaaacaaaggagatcctggattagctggacttggaggattccct
ggacctagaggtgataaaggaatcccaggaagccgtggacagcctggtctccccggtcca
attgggtccgcaagcaaagagagaggttttcgtggtgacccaggcttccctggtccacct
ggacagcctgggctgccaggacagcagggtacacatggtatcataggatttccaggcatg
ccaggagagagggagagagggtaaataccttcttaaggttcagatggtatcacaggaaca
cttggattcccaggtcctattggcctccctggtccaaagggtgaccagggagagcctgct
ggcatttctggcattgctggagcaaaaggagagcgaggggacccggggttcccaggagag
agagggagagaaggactcaagggtgaaccaggctacccaggaaacactggggtgaacgga
ctcaaaggcagcccaggagatcttggccaagaaggaccagcaggaatccctggaaacgct
gggctgagaggaatccctgggccaccaggacctccagggcagccaggatctgtcggattc
cctggagctcgtggaacagcaggacctaaagggtttcatggatttccgggtttaaatggt
ctgaatggcttgccgggcacaaaagggtctcctggaacaccaggtctgagtgaagctgga
ctgaaaggccctgcaggtctcccaggtccgaagggtgaaggaggttctccaggcttgggt
agaggagctctaggattccctggaccaaaaggctcagcaggagacatgggtccccctggt
cctgtgggactgcctggcttgccaggaacacctggagcttctcttccttctgatatacgt
gggagacctggggacgctggccatccaggaactgatgggagttcaggtcttccaggtcct
ccaggaccacgagggccctctggcccagcttctgaccaaggtgacacaggcactccaggt
ttccctggtgttcttggcttgcgaggcattaagggtgacgtgggacccactggtccaatt
ggactccctggagcatctggattcaaaggtgtaagaggggaccctggccttatggggatg
ccaggtaaagatgggcctccgggggatcctggttaccctgggctgaaaggtgaaatgggc
catcgaggtctccctggccaacaaggggctccaggtacaaccccacagccagaagaaatc
acagcccctgcaggcttacctggtctgccaggaattgatggtgtccctggctttgatgga
gatcctggattccagggcccagctggaaaaccaggtacaaaaggtctgccaggaagatct
ggtttgaaaggacgtgatggtttacctggatcacctggcatagctggggatccaggacct
tcgggtgccccaggaccacaaggatttgaaggatacactttagtgaagcacagtcaatca
gaccaaatcccaccttgtcccataggaatgaataagctctgggacggctacagcttattg
tacgtggaggggcaggaaaagtcacacaaccaggatcttggttttgctggctcgtgtttg
cctcgcttcagcaccatgccttttatttactgcaacatcaatgaagtgtgctactacgcc
agccgaaatgacaagtcctactggctctccaccactgctcctatccccatgatgccagtg
gacagtgttcagatcccacagtacatcagtcgttgctcagtatgtgaagcaccttcccag
gctgtggctgtgcacagccaggacatcaccatcccacagtgtcccgttggttggcgcagc
ctatggataggatactccttccttatgcatactgcggctggtgcagaaggtggaggtcag
tcccttgtctcacccggttcttgcctggaggatttccgtgctactccattcattgaatgc
cagggtgctaggggaacgtgccattactttgcaaacaaatacagcttctggctgacgact
gttgaacagtcgcagcagtttgtcagtgctcctccctcagaaactctgaaagcaggacag
cttcgaacaagggtcagtcgttgccaagtgtgcatgaagaatttgtag
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integrated database retrieval system
