Pygoscelis adeliae (Adelie penguin): 103920309
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Entry
103920309 CDS
T06012
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
padl03021
]
103920309 (SCAF4)
03041 Spliceosome [BR:
padl03041
]
103920309 (SCAF4)
Transcription machinery [BR:
padl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103920309 (SCAF4)
Spliceosome [BR:
padl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
103920309 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103920309
NCBI-ProteinID:
XP_009326286
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSAAAPMTENVTNNEGSPPPPAKVSSDPPQVTANSVPTVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQPPEQKAAFPPPEQKT
SFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPSVSQPALTSLSFSAQAGWCSIPGGFPGEG
IQQPVFPQLPNMDPFQQRMMGIQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVIPP
TAPVQQTFQSPFPVQSESHMQKPHQQDMEVEQPPIQEGKRHVSDNRKSRSRSASRSPKRR
RSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKSETVSVC
STTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRG
NFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETL
SPEWKGIPKKSENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPS
GPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPIT
PPVSVPHTPAVNIPNSTATGVNEDTTKDSSVGNPIPTVVSGSRGNAETTDSSKIYGTVPP
PVAPTNVPAPVTQAIPLLGTQGVAPPPPAPVVGLQTPSTGLLGARPLMPPRHMPPHMMHR
GPPPGPGGFGMPPPHGMKTPFPPPGHFVRPGGMPGSGGPGGPEDNRDGRQFRNDRQTFTP
NRDQERFGRRSFGNRVENDRERYGNRNDDRDHERLGNRDRRDWGRRSPERDRHRDLEDRN
RRSSGHRDRERDSRDRESRRDKEENRGKEKPEMTDRADGDKNHESHSGKMEDADIVSELA
AGESEPAGVKPVEELTSQATSSAEQADKDMGSAAEAPR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacctcctatttcccgagcaaaaatgattctcatcacaaaagctgccatt
aaagctattaagctctacaagcatgttgtccagattgtagagaaatttatcaaaaagtgc
aaaccggaatataaagtccctggattgtacgttattgactctattgttcgtcagtctcgt
caccagtttggaacggacaaagatgtttttgggccaagattctctaaaaatattactgcc
acattccagtatttgtatctctgtccatctgaagacaagagtaaaatagtccgtgtcctg
aacctttggcagaaaaatggagtatttaaaattgaaataattcaacctcttctggatatg
gcagcaggaactagtgccgctgcaccaatgacagaaaacgttactaataatgaaggttcg
ccgccccctccagcaaaagtttcttcggacccccctcaagttactgctaactcagtacct
actgtgccacagttgcccagttctgatgcctttgcggctgtagctcagttgtttcaaaca
acacaaggacaacagcttcagcaaattcttcagacttttcaacagcctcaaaaaccccag
tcaccggtcatagataacactgtgatggctcaggttcaagctattactgctcagttgaaa
actacagcagcacagccaccagaacaaaaagctgctttcccaccgcctgagcaaaaaaca
tcatttgacaaaaagctgctagatcggtttgactatgatgatgaaccagaagcagtggaa
gattcaaagaaagaagattcagctccttctccttcagtttctcagccagctttgacctct
ctctcattcagtgcacaggctggatggtgctcaatacctggtggatttccaggagaaggt
atacaacagccagtatttcctcaactcccaaatatggatccatttcaacagcgaatgatg
ggaatacaacaggatccaatgcgtcaccaggttccgcttcctcctaatgggcaaatgcca
ggttttggtctcctgcctaccccacagtttccacccatggctcagcctgtgattccacca
acagcacctgtgcagcaaacttttcagtctccttttccagtacagagtgaatcacacatg
caaaaaccacatcagcaggatatggaagtggaacagccacctattcaagagggaaaacgg
catgtttctgacaacagaaagtcaagatcgagatctgcatcgaggtcacctaaaaggaga
cgttcaagatctggctcccgatctcgaaggtcacgtcatcgtcgatctcgatctcggtcc
agggatagacgccgacactctcctaagtctcggtcacaagaaagacgtgaacgtgagagg
gagagagaacgcaggtcaaaaggccttcctcagatcaaatcagaaactgttagtgtttgt
agtactacgctttgggtaggacagcttgacaaaaggacaactcagcaggatgttggaagt
cttttggaggagtttggcccaattgaatcaataaatatgataccgcctagaggatgtgcc
tatattgtaatggttcacagacaagatgcttaccgtgccctacaaaaactgagccgagga
aacttcaaagtcaatcagaaatctataaagattgcatgggctttgaataaaggaataaag
ccagattacaagcagtattgggatgtagaattaggtgttacttacataccatgggacaaa
gtgaaacctgaagatcttgaaagtttctgtgaaggaggaatgttggacaacgaaactctt
agtccagagtggaaggggattcccaagaagtctgaaaatgaagtagctcaaaatggaggt
gcagaagctacacataatgaaccagtgtcacctatacctaaagctttacctgttccaatt
cccgttcccatgcctgcaccaataacagtacctcctccacaggttccaccacatccatca
ggtcctcctgtggttggtgcactccaaccacctgctttcacagcacctttaggaatccca
cctcctggatttgctcctggagtgccaccgccgccgccgcctccatttttacgacctggt
ttcaacccaatgcatttacccccaggctttcttcctcctggaccaccaccaccaataact
cctccagtatctgttcctcacactccggcagtaaacatcccaaactctacagcaactggt
gtgaatgaagacactacaaaagattcgtctgtaggaaatcccatcccaacagtggtttct
ggatccagagggaatgctgaaactaccgatagttccaaaatatatgggactgttccacct
cctgtagcacctactaatgtacctgctcctgtcacccaagctattccacttcttggcact
caaggagttgcgccacccccgccagcccccgttgttgggttgcagactccatccaccggc
ctcttaggggcccggcctttgatgccaccgcgacacatgcccccccacatgatgcacaga
gggcccccgccggggccagggggcttcgggatgcctcccccccacggaatgaaaaccccc
ttcccgccgccgggtcactttgtgagacctggggggatgccgggaagcggggggccaggt
ggacccgaggataacagagatgggaggcagttcaggaacgacaggcagacgttcacgcct
aacagagaccaggaaaggtttggaaggagatcttttggaaatcgggtagaaaacgatcgt
gagcgctacggtaaccgcaacgatgaccgagatcacgagcgacttggtaatcgtgacagg
cgagactggggaagaagaagccccgagcgtgatagacacagggacttggaggacagaaac
aggcggtccagcggccatcgagaccgggagagagattctagagatagggagtctcgcaga
gacaaggaagaaaatcgagggaaggagaaaccggagatgacagacagggcagatggcgac
aaaaaccatgaatctcatagcggcaaaatggaagacgcagacattgtttcagaacttgct
gcgggagagtctgaacctgcaggtgtaaaacctgttgaagagttaacatcccaggctacc
tcatctgcggaacaagcggacaaggatatgggctcagcggcggaggctcctcgctag
DBGET
integrated database retrieval system
