Pygoscelis adeliae (Adelie penguin): 103920445
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Entry
103920445 CDS
T06012
Symbol
VPS13A
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
padl04131
]
103920445 (VPS13A)
Membrane trafficking [BR:
padl04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
103920445 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
DUF5764
Motif
Other DBs
NCBI-GeneID:
103920445
NCBI-ProteinID:
XP_009326462
LinkDB
All DBs
Position
Unknown
AA seq
3174 aa
AA seq
DB search
MSSWRRAVALKNLEIKENALSQLDVPFKVKAGHIGQLNLQIPWQNLYTQPVEAVLDGVYL
LIVPTASIKYDAEKEARQLLEARQRELQRIEEAKQKIADQDKVKEEKQDTFVEKLVTQVI
KNLQVKISNIHIRYEDDITNRNNPLSFGISLQNLSLQTSDKNWNPCLHDETAKLFYKLVR
LDNLFAYWNVKSEMFYHGGCDESLVNLKQGVASHNVIPEGYDFVFRPISARAKLLMNPRS
DVDFSSPKMDLDVNLQDISVEFNKPQYFSVMELLESIDMMSRNLPYRKYRPDVPLHGNAK
TWWKYVIYGILEVNVQPKLQMWSWEHIRHHRKQVKNYKEMYKTKITSKKPNEEILKLLEE
FEKALDIFNITLARQQAEVEATKAGFKIFRPGVKQDDENGGGWFSWIWSWSGEKKNEQKQ
EVKGSSLEELMTREEKAKLYAAIGYSETAVDPTLPKSYEAMKFSVKLLSMSISIRENKQT
PELVKFALTGLSTVFTQRPGAQAIRFETKITSLEVTGMSREKCTPCLLSSRTVYSDESTS
LLSIMFETNPLDEKADQRLRIESQPLEIVYDAMTINSLVDFFRPPKDVHLEQLTSATLMK
LEEFREKTSTGLLYVIETQKVLDLKINLMASYIIVPQKGFYDCTSNLLLLDLGNLKMKSK
SRSDISELKVGQSTIEDIMSRAYDSFDIQLSSIQLLYSKHDENWQEARKLKYSSQHILQP
LDVKVEFSRAMVVTDARMPKFKLSGQLPLLSIQISDQKLTSILELIDSIPKPESAPATSS
PPKITEAAISPVLSAPHLSQGVFPVLDLHSFAESESEEEFYDALSSPVEDMPFFEAPSGS
LKRASSTRRKKLRKQESLKNMTEFQLRFEVAEVLIKLCRLTGNMETPVLQLDIVGLGTEL
KLRTFDMTANAFLREVCLMCPEYMDDNDKPVYIITTLDNVEDDLLTLEYIKADIHGPELK
TVYQNVLQKIKVNFSSLDVHLHTEALLNAMNYLNNLLPKQETKVAEELVHEKIEEKKDVL
KKLTSKKSKYEDVIDLNICADLSCLRIFIREKKHRIAEIHIEGLDSQVIMKKAATEVTAK
LKNIIIVDSDEMALYKKALYITGKEVFNFRMVSYVNATDGIAYTNMDVVDNRIYLTVGCI
QVVFVNKFVSSILAFINNFQAAKEALTEATVQAAEKAATGVKELAERSSRLALDINIKAP
VVIVPQSAMSANVLVADLGLITVKNQFFIAKTKTRYNLPPVVDSMTVKLSELKLYRSCYE
QGSLQTEVQLLQPLNLEVAVERNLAAAWYNEVPDIEISGRLKPMNLILSQEDITTILRTL
NENIGGSSGASTPLPEPKDTTSHCSDMHSTSQHSAGVTVVTSAVVELHSPVKIRTTLKLD
FRFDSLTLVLYSPNSKQVTNLDQRDDLLKLAEFKLVLMSAAVKMLSDSSMNASVKLANCT
LDDKRQSIQKATPRMVEMKHGFEKKVMVDISYKQGRDGTVLDVIVQEIYLCASMEFLLTV
ADIFLKANAESAAAQRNLKQSLPLKEQAPVQPVSTMEMNVVVKNPEIVFVADLTRSDAPA
LVVTTQCEVFIKNSPERYSMTAAVKEIQMKACPFLPEKRKGNITTVLQPCDFFFEMKQSG
TNPQTADLTIKSLTIKVSPIIINTVITITSALYQTAETTEEEISEIPPDLWNKKDIKNLK
MWFLEESNENEDTNPTAELVPTGESLKMNIESVFLTLEAGVGHRTVPMLLANASFLGEVK
NWSTLINLRSRLELEVHYFNEMFGVWEPLLEPLEVEKTDLFKPWILEIKMKKKAKKALVE
SDAEEENYKVPEYKTVINVSSKDQLNITLSKCGLQMLSNLGTAFAEAASQTSDIFKKDRA
PFVIINSLGLPITVSPSDSFSVLNVEFGAKIFHLRDGENLNMEFVRTKNESDQFTAMTTL
SSKRFYIQICPHNHSTVEKIPLTKVGRCIYRVRHEESGVERSIVCQIDTVEGSKMITIRS
PIQIRNHFSIPLNIFEEGRCLGTASPENEFNIPLSSYRSILSLQPLANENGVDGDYDMCE
GITFDEIMKNVDSLLQRKCQSVRSTNHSLIINIVPVKDTLTSSLCAEDQWDFPYVVHLWP
SVLLRNLLPYQITYSVEGNGNKYDTLQEGCSAEIHNAVLDQTKLDLQLLNYLDQNWKSEY
HIKSNLPDISFTTFCCITELDKTELDIAVHVTYTTGQMVIAIHSPYWMVNKTGRMLQYKA
DGIHRKHPPDYKKPLLFSFQPKNFLQNNKVQLMVTDSELSDQFSLDTVGSHGSVKCKSHK
KEYQVGVTINNSSFNITRIVTFTPFFMISNRSKYTLEVAEEGKEKWIPIVLQQCIPFWPE
NDANKLLVRVENSDLPPKKINFDKQENCLLLHLDNKLGGITVDVNLTEHSTVITFSNYHD
GAAPFLLINHTKEEIIEYGQSSLGELEDCLQPNKAVLYTWADPAGSRKLKWKCGNRTEEI
TPKEDKMEILSLDCRKVVYLVSFFEGLQRIVLITEDENVFKLTYESVKAELAEQEIVLSL
QDVGISLVNNYTKQEVSYIGITSSDVVWETKPKKKSRWRPMSVKQTDKLEQEFKDYSELT
PSENKIIPLESNVLVCLTPNGMNMKIQQPNEIPIRRNYLPALKVEYSSSAHQKSFRIQIY
RIQIQNQIPGAIFPFVFYPIKPPKSITLDSAPKPFTDVSIVMRTAGHSQISHIKYFKVLI
QEMDLRLDLGFLYALVEFFTQADVLSDQELELFKKDVESLQEELMSVSSMDTSQISLYEY
FHISPIKLHLSFSLSTGGEDSNKEERKNELIPLQSLNLLLRVXWTPSQSIGATLTDVQDV
VFKLAFFELSYHFCTTQQLQSAVVRHYSKQAIKQMYVLILGLDVLGNPFGFIRGLSEGVE
AFFYEPYQGAIQGPEEFIEGMALGLKALVGGAVGGLAGAASRITGAMAKGVAAITMDEDY
QQKRREAMNKQPTGLREGITRGGKGLVSGFVSGITGIVTKPIRGAQKEGAAGFFKGVGKG
LVGAVARPTGGIIDMASSTFQGIKKVADSSEDVISLRPPRFFGEDGVIRPYRLRDGTGSQ
MLQKIENGRFAKLRYIAHAMVNSTDLLMVTKSGVLFVTKGTFGQLTCEWQYTYDEFTKEP
FIVDGRRLRIEAKERVKSVFHAKEFGKIINFKSPEDAKWILSKLEEVRENQPKL
NT seq
9525 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttggagaagagctgtagcactgaagaatcttgaaataaaagaaaatgcactg
agtcagctggatgtgccatttaaagttaaagcaggacatattggtcaacttaacctacag
attccatggcaaaacctttatactcaacccgttgaggcagttcttgatggagtttatttg
cttattgtgcccacagccagcataaaatatgatgctgaaaaagaagccaggcagctcttg
gaagcaagacaaagggaattgcaaaggatagaggaagcaaagcagaaaatagctgaccaa
gataaagtaaaagaagagaaacaagacacttttgtagaaaaactagtcactcaggtcatc
aaaaatcttcaggtgaaaatttccaacatccatattcgctatgaagatgatatcacaaat
cggaataaccccttgtcatttgggatttcacttcagaatctaagtttgcagacctcagat
aagaattggaatccatgtttacatgatgaaactgccaagttgttctacaagcttgtacga
ctggataacctttttgcttactggaatgtgaaatcggagatgttctaccacggtggttgt
gatgaatcgttggttaacttaaaacagggagttgccagccacaacgtgattccagaaggt
tatgattttgtattccgcccaatttcagctagagccaaactccttatgaatcctcgatct
gatgttgacttttcatcaccaaaaatggatttagatgtaaatttacaggatataagtgtt
gaattcaataagccacagtacttcagtgttatggagcttcttgagtctattgatatgatg
tctcgaaatctaccatataggaagtacagacctgatgttccattgcacggcaatgccaag
acatggtggaaatatgttatttatggcatccttgaagtaaatgttcaacccaagctccaa
atgtggtcatgggaacatattcggcaccataggaagcaagtgaagaactataaagagatg
tataaaacaaagataacatcaaaaaaacctaatgaagaaatcttaaaattgttggaggaa
tttgaaaaggccttggatatttttaacatcactctagcaaggcaacaagcagaagttgag
gcaactaaggctggattcaaaatcttcagaccaggagtaaaacaagatgatgaaaatggt
ggtggctggtttagttggatatggagctggtcaggcgaaaaaaagaatgaacaaaaacaa
gaagtaaagggttcaagtctcgaagagctgatgacacgtgaagagaaggctaaactttat
gctgcaattggatatagtgaaacagctgtggatccaacccttccaaaatcatatgaagcc
atgaagttctctgtgaagttattaagcatgtctatatcaataagagaaaacaaacaaact
cctgagctggtaaaatttgcattaactggcttgagtacagtatttacccaacgaccaggt
gcacaagcaataagatttgaaacaaaaattacctcacttgaagttacaggcatgtcccga
gaaaagtgtacaccctgtctcctatcttctcgaacagtctattcagatgagagtacctca
ctcttaagcataatgtttgagactaatcctttggatgagaaagcagatcaaaggcttaga
atagaatcacagccgctggaaatagtatatgatgcgatgacaataaatagcttagtagat
ttcttcaggcctccgaaagatgtacatttagagcagttgacatcagcaactctgatgaag
cttgaagagttccgtgaaaaaacatcaacaggtttgttgtatgttattgaaacccagaaa
gttcttgacctaaaaattaacctcatggcttcatacatcattgttccacaaaaaggtttc
tatgactgtacgtccaatttactacttctggaccttggtaatcttaagatgaaaagcaaa
agtcgttctgatatatcagaactcaaagtaggacaaagcactattgaagatataatgtca
agagcttatgacagttttgatatccagctcagcagtatacagttactgtacagcaaacat
gatgagaactggcaagaggctcggaagctgaaatattcatctcaacatatcttgcagccc
ttggatgtaaaagtggaatttagcagggctatggttgttacagatgcaagaatgcccaag
ttcaaactgtctggacagctgcctttactttctatccaaatatcagaccagaagctgaca
agtatcttggagctaattgatagcattcctaagccagaaagtgctcctgctaccagttct
cctccaaaaataactgaggctgcaatatcccctgtgctctcagcaccacatttgtcacaa
ggtgtgtttcctgttttggatcttcattcatttgctgagtcagaatcagaagaagaattt
tatgatgctctaagcagccctgtggaagacatgccattttttgaagcgccgtctggttcc
ctcaagcgagctagcagtacaaggcgaaaaaaactacgtaaacaagagtctttgaaaaat
atgacagaattccagctaaggtttgaagtagctgaggtcttaattaaattatgccgtctt
actggtaatatggagacacctgtgctgcagcttgatattgtagggttaggcactgagctt
aaattaagaacatttgacatgactgcaaatgctttccttcgtgaagtttgtctgatgtgc
ccagagtatatggatgataatgacaagccagtttacataattactactttggataatgta
gaagatgatcttctcactctggagtacataaaggctgatattcatggaccagaactgaaa
actgtctatcagaatgttctacagaaaataaaggtaaacttttcatctctagatgttcat
ttgcatactgaagctctgctgaatgctatgaactatctgaataatcttctacccaaacaa
gaaactaaagttgcagaagaactggtccatgaaaaaatagaggagaagaaggatgttctt
aagaaattaacatcaaaaaaatcgaagtatgaagatgttattgacctcaatatctgtgcg
gatttatcctgtttacgtatctttatcagagagaaaaaacatagaatcgctgaaattcac
attgaaggtctggatagccaagtgatcatgaagaaagcagcaacagaagtgactgcaaaa
ttaaagaacatcattattgtggattctgatgagatggcgttgtataaaaaggctctttac
atcacaggaaaagaagtcttcaacttcagaatggtatcatatgtgaatgctacagatggc
attgcatatacaaatatggatgttgttgacaatcgtatttacctaactgttgggtgtatt
caagtagtttttgtcaacaaatttgtttcatctattttggcttttataaataattttcaa
gccgccaaggaagctcttactgaggcaactgttcaagcagcagagaaagcagctacaggt
gtaaaagagctagcggagcgtagttcccgtttggcactagatatcaatattaaagcacct
gttgtgatagtcccacagtcagcaatgtctgcgaatgtcctggtggccgatcttggtcta
atcactgtgaagaaccaattctttattgctaaaacaaaaacacggtataatctcccgcct
gttgttgactctatgacagtgaaattgagtgaactaaagttatacagatcatgctatgag
cagggttcattgcaaactgaagtacagttgctgcagccactcaacctggaagtagctgtt
gaacgaaatttagctgctgcatggtataacgaagttcctgatattgaaatatctggccga
ctcaagcctatgaatctaattctcagtcaggaagatattaccacaatattgaggacacta
aatgaaaatataggtggaagctctggtgcatcaacacctttgccagaaccaaaagatacg
actagccattgtagtgatatgcatagtacttcacagcactctgcaggtgtaactgttgtg
acatcagctgtggtggaattgcattcacctgtgaaaataagaacaacactaaaactggac
ttcagatttgactctctgactttagtattgtatagtccaaattcaaaacaggttacaaat
ttggatcagagagatgaccttttgaagcttgcagagtttaagttagttttgatgtcagct
gctgtcaaaatgttatcagatagttcaatgaatgcttcagtcaagctggcaaactgtaca
ttagacgataaaagacagtcaatccagaaggctacgccaaggatggtggaaatgaaacat
ggatttgaaaagaaagttatggtggatataagctataagcaggggagagatggcactgtt
cttgatgtgattgttcaagagatatacctttgtgcaagcatggagtttctacttactgtt
gcagatatattcctaaaggctaatgcagaaagtgctgctgcacagagaaatctcaaacag
tcattacctttaaaggagcaagcacctgtgcagcctgtatctacaatggaaatgaacgtt
gttgttaaaaatccagagattgtgtttgtggccgatttaacaagaagtgatgctcctgca
ttggtggttacaacacagtgtgaggtcttcattaaaaatagccctgaaaggtatagcatg
acagctgctgttaaagagatacaaatgaaagcatgcccatttcttccagaaaaaaggaaa
gggaacattactacggtattacagccttgtgacttcttctttgaaatgaaacagtcaggt
actaatccacagaccgctgatctaacgattaaatctctaacaataaaagtttcaccaata
atcataaacacagtaattactattacatcagccctttatcaaactgcagaaacaacagaa
gaagagattagtgaaattcctccagacttgtggaataagaaagatataaaaaatctaaaa
atgtggtttcttgaagagtcaaatgaaaatgaagatacaaatccaactgctgaactggtt
cccacaggagagtcattgaaaatgaatatagaatctgtttttctaacacttgaagctggg
gttgggcaccgaactgtaccaatgcttttagccaatgcctcatttcttggagaagtcaaa
aactggagtactctaatcaacctacgttctcgtcttgagctagaggtacactattttaat
gagatgtttggagtgtgggaacctttgcttgaaccactagaagttgagaagactgattta
ttcaaaccatggattcttgaaatcaagatgaagaagaaggctaaaaaagcgttggttgaa
tcagatgcagaagaagaaaactacaaagttccagaatataaaacagtaataaatgtttcc
tcaaaagaccagctgaacattacactatccaaatgtggcctacaaatgttgagtaacttg
ggcacggcatttgctgaagcggctagtcaaacttcagacatcttcaaaaaagaccgagca
ccatttgtaataataaattcgttaggacttcccatcactgtctcgcctagtgattccttt
agtgtccttaatgttgaatttggagcaaaaatatttcatttaagagatggagagaattta
aatatggaatttgtcagaactaaaaatgagagtgaccagttcacagcaatgacaactctg
agtagcaagaggttttacattcagatctgtccacataatcattccactgtggaaaagatt
ccattgacaaaagtgggtcgatgtatttaccgagtgagacacgaggaatcaggtgttgaa
aggtctattgtctgccaaattgatactgttgaaggaagcaagatgataactatacgttct
cctattcagataaggaatcatttttcaatcccgttaaatatttttgaggaaggaagatgt
ttagggacggcttcaccagaaaatgaattcaacataccattgtcctcttacagatccata
ctgagtttgcaaccgctagccaatgaaaatggagtggatggagattatgatatgtgtgaa
ggaattacatttgatgaaattatgaaaaatgttgacagtttattacaaaggaaatgccag
tctgtgaggtcaactaaccactcacttatcatcaatattgttcctgtaaaagacacgttg
acatcttcattatgtgcagaagatcaatgggattttccatatgttgttcatttatggcct
tctgttcttctccgcaatcttcttccttaccagataacttattctgtagagggaaatggg
aacaaatatgacactttacaagaaggatgttcagccgagattcataatgcagtcttggat
caaacaaaactagatttacagttgcttaactatcttgatcaaaattggaaaagtgagtac
catataaaaagcaatctaccggatatcagcttcacgacgttttgctgcatcacagagctg
gataagactgaactagatattgctgtccacgtgacctacacaactgggcagatggttata
gcaattcacagtccgtactggatggtaaataaaactggtcgaatgttgcaatacaaagct
gatggtattcaccgcaagcatcctccggattacaaaaagccgctccttttttctttccag
cccaaaaacttcctccaaaataacaaggtgcaacttatggtaactgacagtgaactgtct
gatcagttttcactggacactgttggaagtcatggttctgtgaaatgcaagagtcataaa
aaggagtatcaagttggtgtcaccataaacaacagcagttttaatattactagaattgta
actttcactccattttttatgatctcaaatagaagcaaatacactttggaagtagctgaa
gaaggcaaggaaaagtggattcctattgttttgcaacagtgcattcccttttggcctgaa
aatgatgccaacaaactgcttgttagagttgaaaattctgatctccccccaaagaagata
aattttgataagcaagaaaactgtctgctactgcatttggacaacaagcttggaggaatt
acagtggatgttaacctgactgaacattctacagtgattaccttttctaattaccatgat
ggcgcagctccatttctgttgataaaccatactaaagaggaaattattgagtatggacaa
agctccctcggtgaattggaagactgtcttcagccaaataaggcagtactgtatacttgg
gcggacccagcaggatctagaaaattgaaatggaaatgtggaaatagaactgaggaaatt
accccaaaagaggacaaaatggaaatactcagcctggattgtagaaaagtagtctattta
gtgtcattttttgaaggtttgcagcgtattgtcctgatcactgaagatgagaatgtattt
aaattgacatatgaaagtgtaaaagcagaactagcagaacaagaaattgttctgtctttg
caagatgttggaatttcgttggttaataattatacaaagcaagaggtgtcctacattgga
attacaagttctgatgtggtttgggagacaaaacccaagaagaagtcaagatggagacca
atgagtgttaagcagactgataaattagaacaagaattcaaagattacagtgagctaact
ccttcagagaacaagattattccgttggaatctaatgttttggtatgtttaactcctaat
ggaatgaacatgaaaattcaacagccaaatgaaattcctatcagaaggaattatctgccg
gctttaaaagtagaatacagttcatctgcacatcagaagtctttcagaattcaaatttac
aggatacagatacaaaaccagattcctggagccatatttccctttgtgttctatcctatt
aaacctccaaagtccatcaccttggattcagcaccaaaaccatttactgatgtcagtatt
gtcatgaggactgcaggacattcacaaatatctcatattaagtattttaaggtcctgatt
caagagatggatctcagattagatcttggcttcctgtatgcactggttgaattctttaca
caggctgatgtgctgagtgaccaagagctagaacttttcaaaaaggacgttgaatctctt
caagaagaactgatgagtgtgtcatcaatggatacgtcacaaatcagcttgtatgaatac
tttcatatctctccaattaagttacacttaagcttttcactcagtacgggtggagaagat
agtaacaaagaagaaagaaagaatgaactgataccacttcagtccctgaatctcctgctg
agagtatagtggacaccctcacagagtataggggccaccctcacagatgtacaagatgtt
gtctttaagttggcattctttgaactcagctatcacttctgtactacacaacagctccaa
tcagcagttgtaaggcattattcaaaacaggctattaaacagatgtatgttcttattctt
ggccttgatgtcttgggtaatccatttggattcataagaggcttgtctgaaggagtagaa
gcattcttctatgaaccttaccagggagccatccagggtcctgaagaatttatagaagga
atggcactaggacttaaagcactagtagggggagctgttggtggattagctggtgctgca
tcgagaatcactggtgctatggcaaaaggagtagctgcgataactatggatgaggattac
cagcagaaaaggagagaagccatgaataaacagcccactggtctgagagagggcatcact
cgtggcggaaaaggattagtttctggttttgtcagtggcataacaggaatagttacaaaa
ccaataagaggagctcagaaagaaggagcagctggttttttcaaaggtgttggaaaaggc
ttagtgggagcagtagctaggcctactggaggaatcatagacatggcaagcagcacattt
cagggtattaaaaaagttgcagattcatcagaagatgtgataagcctgcgcccacctcgc
ttctttggtgaagatggcgttattagaccttacagattaagagatggaactggaagtcaa
atgttacagaaaattgaaaacggaagatttgcaaaactcagatatattgcacatgctatg
gtcaacagtacagacctgttaatggtaacaaaaagcggtgtgttatttgtgacaaaaggg
acatttggacagctgacatgtgaatggcaatacacttacgatgaatttaccaaagaacca
ttcatcgttgatggcagaagattacgcattgaagccaaggaacgagttaagtctgtgttc
catgccaaagaatttggaaaaattattaattttaaaagtccagaggatgctaagtggatc
ctttctaaactggaagaagtgagagagaatcagccaaaattgtaa
DBGET
integrated database retrieval system
