Pygoscelis adeliae (Adelie penguin): 103920662
Help
Entry
103920662 CDS
T06012
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
padl03009
]
103920662 (PDCD11)
Ribosome biogenesis [BR:
padl03009
]
Eukaryotic type
90S particles
Other 90S particles
103920662 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
HAT_PRP39_N
Suf
OB_RRP5
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
ARM_TT21
TPR_CcmH_CycH
TPR_12
TPR_16
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
103920662
NCBI-ProteinID:
XP_009326711
LinkDB
All DBs
Position
Unknown
AA seq
1836 aa
AA seq
DB search
MASMEENFPRGGIQKKPTEGKAPNPKLERDNLFDIHHDERSQKRKRSQRDQGKQKKFKAD
KIAAAKDNVVNIEPLTIEALCEGMLLLGCIKEVSDYELVISLPNGLSGFVPVTQISDAYS
KMLSKQVAQGEVLEDLNSLSDMYSPGTLVRCIVTSVEKSADGRRSVKLSIDPKKVNKGLT
ASALVSGMLLSGFVSSVEDHGYLIDIGVSGTHAFLPHQKAQNYIKAVKRGPDMKIGQNLN
CVIVEVKNEGRVVRLSVDRSDVAASLATERQNWTLSNLLPGLVVKARVQKVAPLGIKVSF
LSSFTGIVDFMHMDPEKSMNYSPDQVIKACILSIHPTSKVVRLTLRQAFLHPGGSPNQLS
NDRMGAVVEESTVKAFYKQFGAIFELDDGTLAFARLKHLSKTRKSFKPGAFKTGCKHKCR
IIDYSLMDEMCIVSLKYQIIEARFLQYQDIHTGDVVQGKVFALKPIGMQVKVTDGIKGLV
PSMHLADVILKQPEKKYNIGDEVRCRVLECSPAGKKLILTLKKSLVQSKLPVLSSYEDAK
PGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSSEPISCPDKVFHEGQVVKVMVLKCE
PQQERLLLSFRLSSKPAPEDKKECTPKKKQEVKYQIGEMVDVKVLKKKDNGLEVSVLEDE
GNVIASIPTVHLSDFVANCKLLWHCLQEGDVLPRVMCLHDKGEHIILSRKSAVISAVQEE
QVVRSFSEIQPGMLLTGYVRNVMPFGVFVEFPYGVTGLAPKVSMSDKFVTDTKDHFVVGQ
TVIAKVMSIDEEKQRVLLNLKLSECSSGDSAAESFALLNQYFKEMKEIRNLLRRRGEPSV
ARGLCELVPGKELQLVVQDVKEDGSALFSGRRVTGLTIILFLFVDKNIVPGEKTKALVLH
VDALTSKVYVSLREELLKQRAKLRLTENSQHSAIVQHIAEEFAIVSLLEMGQLAAIPIAS
HFNDTFRFDSEKLKVGQTISATLKVVKVNDLGVLLAVQGPAKKNVFVRVRNESETALEEM
LAAVKHSLSLGDIVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTYTLKAG
QKVTARVIGGRDVNTHRYLPITHPHFTQSIPELSIRPSEMEGKVTAMLNLKADSALKKLG
LYDVGQTVTCFVKKYNVLKNWLEVEVTPDIRGRVPHLLLSLNTKVLKHPEKSFKNGQAIS
ATVTGTDVTETNLFLSLTGIQSLEQGTITVGMVTKVTPHIGLTIALPGGKTGKVSVFHLN
DTYTENPLGDFKVGKIVRCYILSNENGKIQLSLRQSRLNPKSNSKVEDVEITCIKDVKKG
QLVRGYVKSITPSGVFFGLSTSLLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAKVLGV
NAKEKHIELSLLPEDTRMPSVLPESLGLPRYDAEEEKREANDREKREELKLKTKRRRGNS
ENEQEAKPKKRKICPADENDSGIEVYYREEEDDDQKEEAAKKKSKIRKPGEAPRLQVSMG
FTWDEDMNAMDIPVLNQKEESSESEEEEDPQSKLKKQTKKEKELEKQKKEKELCKLEAAL
MDPSRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFREEQ
EKLNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYANSEKYKQAEELYH
TMLKRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHVDVISRFAQMEFRFG
DPEHAKALFESTLNSYPKRTDIWSIYMDIMIKHGSQKEVRDIFERVIHLSLAPKKMKFFF
KRYLDYEKKFGTTESILAVKRAALEYVETKSSLADT
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatggaagaaaactttcctcgagggggcatccagaaaaaacccacagaggga
aaagcccccaacccaaagttagagcgggacaatttgtttgatattcatcatgacgaacga
tcccagaaaaggaaaaggagccaaagggatcaaggaaagcagaaaaagttcaaggcagat
aaaatagctgctgctaaagacaacgttgtgaatattgagccactcacaattgaggcactc
tgtgaggggatgctgctccttggttgtataaaagaggtcagtgactacgagctagtcatc
agcttacccaatggactttcaggatttgtgccagtcacgcagatcagcgatgcctacagc
aaaatgctgagcaagcaggtggcccaaggagaagtcctggaggacttgaattcgctctcg
gacatgtattctccagggacactggtcaggtgcattgtaaccagtgttgagaaaagtgct
gacggacgtcggagtgtcaaattatcgatcgaccccaagaaggtcaataaaggtctgact
gcttcagcactagtatcgggcatgctgctctctggctttgtgtctagtgtggaggaccat
ggctacctcattgatattggagtcagtgggactcatgctttcctgcctcatcagaaagcc
caaaattacatcaaagcagtcaagagagggcctgacatgaaaataggccagaatctgaac
tgtgtcattgtggaagtaaagaacgagggaagagtggtccgtttgtctgttgatcgatca
gatgttgctgcatcccttgcaacagagcgacagaactggaccctctctaatttgttacca
gggctggtggtgaaagctcgagtgcagaaggtggccccactcgggatcaaagtgagcttt
ctgtcttccttcactggcattgtggatttcatgcacatggacccagagaaatccatgaac
tattctccagatcaagtgataaaagcttgcatcctctctatccaccccacctccaaggtg
gtgcggcttactctacggcaggccttcctccaccctgggggatccccaaaccagctctcc
aatgatcgcatgggggcagtggtggaagagtcaacagtaaaagctttctacaagcaattt
ggtgccatctttgagcttgatgatggcactcttgcatttgcacggttgaaacatctttca
aaaaccagaaaatcctttaaacctggggcatttaagacaggatgcaaacataaatgtcgg
atcattgactacagcctgatggatgagatgtgtattgtatctctgaagtatcagattatt
gaagcgcggtttctgcaataccaagatatccacacaggggatgtggtgcagggcaaagtg
tttgcattgaagcccattgggatgcaggtgaaagtgactgatgggattaaagggctcgtg
ccgtccatgcatctcgctgatgtgattctgaaacagcctgagaagaagtacaacatagga
gatgaagtcaggtgtcgggtgctagagtgcagtcctgcaggaaagaagctgatccttact
ctaaagaaaagtcttgtccaatcaaagcttccagtcctctccagttatgaagatgcaaaa
ccaggtctgatcacacatggctttgtggtgtgtgcgagggagtttggctgcattgtgaag
ttctacaatgatgtcaaaggtctggtacccaagaatgagctgagctcagaacccatatct
tgtccagataaagtcttccatgaaggccaggttgttaaagtaatggtcttaaaatgtgag
ccccagcaggaaagacttttgttgtccttcaggttatcaagcaagcctgccccagaggac
aaaaaggaatgtactccaaagaagaaacaggaagtgaaatatcaaataggagagatggtt
gatgtgaaagtcttgaagaagaaagataacgggctagaggtttctgtcttagaagatgaa
ggcaatgtgatagcctcgattcccacagtgcacctctctgactttgttgctaactgcaag
ctcctgtggcattgtcttcaagagggagatgtcctgcccagagttatgtgtctacatgac
aagggagagcatatcatcttgagcagaaagtctgcagtgatctctgctgtacaggaggag
caagttgtgagaagtttctctgaaatccagcctgggatgctgttgactggttacgtgagg
aatgtgatgccctttggagtgtttgtggagttcccttatggtgtgacaggtctggcgccc
aaagtgagcatgagtgacaagtttgtgacggacaccaaggaccactttgtggtgggacag
actgtgattgcgaaggtgatgagcattgatgaggagaagcagcgtgtgctccttaatctg
aagttgtcagagtgcagctcaggcgattctgctgcagagagcttcgccctgctgaatcag
tatttcaaggagatgaaagaaatcaggaacttgttgagaagaagaggggagcccagcgtg
gcccgaggcctttgtgagctggtgcctgggaaggagttgcagctggtcgtgcaggatgtg
aaggaggatggctcagcactgttcagtggcaggcgtgtcacaggcttgactataatctta
ttcttatttgtagacaaaaatattgttcctggtgagaaaaccaaggcattggttcttcat
gtggatgccctcacatccaaggtgtatgtttctcttcgggaagaactgttaaaacaaaga
gccaagctgcggctcacagagaactcccagcactctgccatcgtgcagcacatagcagaa
gagtttgccattgtgtctttgttggaaatgggccagctggcagctattcccatagcctct
cacttcaatgacaccttccgctttgactcagaaaaactgaaggtgggacaaacaatctct
gcaaccttaaaagtagtgaaggtaaatgacctcggagtcttgttagcagtacaaggccca
gcaaagaagaatgtttttgtaagggtccggaacgaatctgagacagcattagaagagatg
cttgctgctgtgaaacactcactttccctgggggatattgttactggtactgttaaatcc
gtcaaaccaacccatgtcacagttgctattgatgacaagctgacaggttcaatccacgca
tcccggattctggatgaagtgcctataggctcttttccaacatataccctgaaagctgga
cagaaggtgactgcccgagtcattggaggcagagatgtgaatactcacaggtacctgccc
attacccatccgcacttcacacagtccattccagagctcagcattcgaccaagcgaaatg
gaagggaaagtcacagcaatgctgaaccttaaagcagacagtgccctcaagaaacttgga
ctctacgatgttggacagacagtcacctgttttgtgaaaaagtataacgtcctcaaaaat
tggctggaggtagaagtcacccctgacattcgaggaagagttcctcatctgctgctgtct
ctgaataccaaggtcttaaaacatccagaaaagagcttcaaaaatggccaggcaatatca
gctacagttactggaacagatgtcaccgaaacaaacctcttcttgtcactcacaggaatt
cagtcactggagcagggcaccatcactgtaggcatggtaacaaaggtgactccacacatt
ggtttgaccattgcactgccaggtgggaagactggcaaagtcagcgtctttcacctgaat
gatacttacacggagaatcctctgggtgacttcaaagttggcaagattgtcagatgttac
atcctctccaatgagaacggcaaaatccagttatctctccggcaatcccggctaaaccca
aagagcaacagcaaagtggaggatgttgaaataacatgtattaaggatgttaaaaaaggc
cagctagtgagaggctatgtcaaatcaatcactccgtccggtgtattctttggcttgtcc
acttctcttctgggccgaatcctgttccagaatgtttccccttactttgtacagaaacac
tccttgtatgaaaagtacctgcctgaaggaaagctgctcactgccaaggtgcttggtgta
aatgcaaaagaaaaacatattgagctttctctcctgcctgaggacaccaggatgccaagc
gtcttgcctgaatccctaggcctaccacgatatgatgcagaggaagagaaaagagaggca
aatgacagggaaaagagagaagagcttaagctgaagacaaaacggagaagaggaaactct
gaaaatgagcaggaggcgaagccaaaaaaaaggaagatctgcccagcagatgaaaatgac
agtggaattgaggtatattaccgggaagaagaggatgatgaccagaaggaagaggcagct
aaaaagaaatccaagataaggaaacctggtgaagctcccagactgcaggtttccatgggc
ttcacctgggatgaggacatgaatgcaatggatatacctgtgctgaatcagaaggaagag
agctcagagagtgaggaggaggaggatccgcagtcgaagctgaagaaacaaacaaaaaag
gagaaggagctagagaagcagaagaaggagaaggagctctgcaaattagaggcagccctg
atggaccccagtcgacagccccagtcagcagatgactttgaccgcctggtgctgagcagt
cccaacagctccatcctctggctacagtacatggctttccacctccaggctaccgagatt
gagaaggccagagctgtcgcagagagagcacttaaaacaatctgcttcagggaagagcaa
gagaagctgaatgtctgggtagccctactgaacttggagaacatgtatggtactgaggag
acactgatgaaggtctttgagagagctgttcaatacaatgaacctttgaaagtcttccag
catctgtgtgacatctatgccaattctgagaaatacaagcaagcagaagaattgtaccac
acaatgctgaagcgtttccgtcaggagaaatctgtgtggctgaaatacgcctctttcctc
ctgaagcaaggccagactgaggctacacacaggcttttggagcgtgctctcaaggctttg
cccaccaaagaacatgtggatgtaatttcaaggtttgcacagatggagttccgttttggg
gacccagaacatgccaaggccctctttgagagcaccctcaacagctatcccaagcggaca
gacatctggtccatctacatggacatcatgatcaaacatggcagccagaaggaagtacgg
gacatctttgaaagggtcatacacctgagcttggcaccaaagaagatgaaattcttcttt
aaacgctacctggattatgagaagaaatttggtacaacagaaagcatcctggctgttaaa
agagcagcacttgagtatgtggagaccaagagttcccttgctgacacctaa
DBGET
integrated database retrieval system
