Pygoscelis adeliae (Adelie penguin): 103920674
Help
Entry
103920674 CDS
T06012
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103920674 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
padl03021
]
103920674 (TAF5)
03036 Chromosome and associated proteins [BR:
padl03036
]
103920674 (TAF5)
Transcription machinery [BR:
padl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103920674 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
103920674 (TAF5)
Chromosome and associated proteins [BR:
padl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103920674 (TAF5)
STAGA complex
103920674 (TAF5)
TFTC complex
103920674 (TAF5)
SAGA complex
103920674 (TAF5)
SLIK complex
103920674 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD_LRWD1
PEP5_VPS11_N
CDK5RAP3
WD40_like
eIF2A
RAB3GAP2_N
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
103920674
NCBI-ProteinID:
XP_009326723
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MPPFTTLTVMPRVFGGGVVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCH
RAELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMK
GNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQI
DAMVGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGS
KSKKQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQG
LTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKT
ASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ
FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIR
LWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD
TVYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGT
YMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgtttaccaccctcacagttatgccaagagtctttggaggaggcgttgttgtg
gaagaccagccagatgtgagtgcagtattgtctgcctacaatcaacagggggacccgacc
ctgtacgaggaatactacagtggattaaaacacttcattgagtgttccctggactgtcat
cgagcggaattgtctcagctgttttatcctctcttcgtgcacatgtacttggaattggtc
tacaatcaacatgagagtgaagcaaagtctttttttgaaagatttcatggggaccaggag
tgctattaccaggatgacctgcgtgtattatctagcttaaccaaaaaagaacatatgaaa
ggtaacgagaccatgctggatttccgaacaagcaagtttgtgctgcgtatttctcgtgac
tcctaccagctcttgaagaggcatcttcaggaaaagcagaacaatcagatctggaacatt
gttcaggaacatctttacattgatatctttgatggaatgcctcgcagtaaacaacagata
gatgctatggttggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggtt
ttctttggcttattgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaa
ggagaaaatgaggaaggaaagccaaagaagaaaaaacctaaaaaagatagtgtagggtca
aaaagtaaaaaacaagatcctaatgctcctccccaaaacagaattcctctgcctgaactg
aaagactctgacaagctggataaagtaatgaatatgaaggaagctgcaaggcgtgtgcgt
cttggccccgagtgcctgccctccatctgtttctacacgttccttaatgcttaccagggt
ctgactgcagtggatattacagatgattctagcatgattgtaggaggctttgctgactct
actgtcagagtgtggtccgtgactccaaaaaagctacgtagtgtgaaaacagcagcagac
ctcagtctcatcgacaaagaatcagacgatgtcttggagaggatcatggatgagaaaaca
gcaagtgagttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagt
cctgataggaactatctgttgtcctgttctgaggatggcaccgtcagactgtggagtctc
caaacattcacatgtttggtgggatataaaggacacaactatccagtatgggatacacaa
ttctctccttatggttattactttgtgtcagggggacacgacagagtggctcgcctgtgg
gcaacggatcactaccagcctttacggatatttgctggccatcttgctgatgtgacatgt
acccgatttcatccaaactccaactatattgccacgggctcagcagacaggactatacgg
ctctgggatgttttgaatgggaattgtgtaagaatattcactggacataagggaccaatt
cattcattggcgttttctcctaatggacgattcctggctactggtgcaacagatggaaga
gttctgctgtgggatattggacatggcttgatggttggagaattgaaagggcacactgac
actgtctacgcgctcagattcagtagagatggggagattttagcatcaggttcaatggat
aacacagttcgtctgtgggatgctgtgaaggcatttgaagatttagaaaccgatgacttt
actacagccactggacatataaacttgcctgaaaactcacaggacttgttactaggtaca
tacatgaccaaatcaaccccggttgtacacctccattttacacgaagaaacttgctgctg
gctgcaggagcctacagttcacagtaa
DBGET
integrated database retrieval system
