Pygoscelis adeliae (Adelie penguin): 103921635
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Entry
103921635 CDS
T06012
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl04510
Focal adhesion
padl04512
ECM-receptor interaction
padl04518
Integrin signaling
padl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103921635 (COL6A3)
04518 Integrin signaling
103921635 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103921635 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103921635 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
padl04147
]
103921635 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
padl00536
]
103921635 (COL6A3)
Exosome [BR:
padl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103921635 (COL6A3)
Glycosaminoglycan binding proteins [BR:
padl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103921635 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
103921635 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
Ig_J
Motif
Other DBs
NCBI-GeneID:
103921635
NCBI-ProteinID:
XP_009327902
LinkDB
All DBs
Position
Unknown
AA seq
3139 aa
AA seq
DB search
MRKHRHLPFVAMFCLLLSGFCSVRAQQQAAVKTVAVADIIFLVDSSWSIGKEHFQLVREF
LYDVVKALDVGGNDFRFALVQFSGNPHTEFQLNTYPSTRDVLSHIANMPYMGGGTKTGKG
LEYLIENHLTKAAGSRASEGVPQVIIVLTDGRSQDDVALPSSVLKSARVNMFAVGVQDAV
EGELKEIVSESFDTHLFNLENFTALHGIVGDLVASVRSSMTPEKAGAKGLVKDITAQESA
DLIFLIDGSNNIGSVNFQAIRDFLVNLIESLRVGAQQIHIGVVQYSDQPRTEFALNSYST
KADVLDAVKALSFRGGEEANTGAALEFVVENLFTQAGGSRIEEAVPQILVLISGGESSDD
IREGLLAVKQASIFSFSIGVLNADSAELQQIATDGSFAFTALDIRNLDALRELLLPNIVG
VAQRLILLEAPTIVTEVIEVNKKDIVFLIDGSTALGTGPFNSIRDFVAKIVQRLEVGPDL
IQVAVAQYADTVKPEFYFNTHQSRKDVMANVKRMKLMGGTALNTGSALDFVRNNFFTSAA
GCRMEEGVLPMLVLITGGKSRDAVDEAAAEMKRNRIVILAIGSRNADLAELQEIAHERDF
VFNPNDFRVQFMQAILPEVLSPIRTLSGGLIIQEPPSVQVTKRDIIFLLDGSLNVGNANF
PFVRDFVATLVNYLDVGSDKIRVGLVQFSDTPKTEFFLYSYQTKSDIIQRMGQLRPKGGS
VLNTGSALNFVLSNHFTEAGGSRINEQVPQVLVLVTAGRSADPFLQVSNELARAGVLTFA
VGVRSADKAELEQIAFNPRMVYFMDDFSALAALPQELNKPITTYVSGGVEEVPLAPTESK
KDILFLIDGSANLLGSFPAVRDFVHKVISDLNVGPDATRVAVAQFSDTIQVEFDFAELPS
KQDMLLKVKRMKIKTGKQLNIGAALDEAIRRLFVKEAGSRIEEGVPQFLVLLAAGRSTDD
VEQPSDALKQAGVVTFAIKAKNADPVELERIVYAPQFILNVDSLPRISELQPNIVNLLKT
IQLQPTVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVQRVVESLDIGRDKVRVAVAQYSN
VIQPEFLLDTHEDKADLISAIQELKVMGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQ
FLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFLPDFAISVPDFSQL
DTVQQVVSNRVIRLTKKEIESLAPDLVFTSPSPAGVKRDVVFMVDGSRYAAQEFYLVRDL
IERIVNNLDVGFDTTRISVVQFSEHPHVEFLLNAHSTKDEVQSAVRRLRPQGGQQVNVGE
ALEFVAKTIFTRPSGSRIEEGVPQFLIILSSRKSDDDLEYPSLQVKQVGVAPMVVAKNVD
PEEMVQISLSPDYVFQVSSFQELPSLEQKLLTPIETLTGDQIRRLLGDVQPPVDISGDEK
DIVFLIDSSDSVRPDGLAHIRDFISRIVQQLEVGPNKVRIGVVQFSNNVFPEFYLKTHKS
KNAVLQAIRRLRLRGGFPVNAGKALDYVVKNYFIKSAGSRIEDGVPQHLVVILGDRSQDD
VNRPANVITSTSIKPLGVGARNVDRDQLQVITNDPERVLVVQDFTGLPTLEKNVQSILEE
LPIPTTETPGPLGPGGKKQADIVFLLDGSINLGRDNFQEVLQFVYSVVDAIYRDGDSIQV
GLAQYNSDVTDEFFLKDYSTKPQILDAINKVIYKGGRVANTGAAIKHIQAKHFVKEAGSR
IDQRVPQIAFIVTGGKSSDDGPSASLEITQKGVKVFAVGVRNIDLKEVSRLASESATSFR
ASTAQELSELNEQVLVTLEAAMEEKLCPGTTDVTRDCDLDVILGFDVTDVGPGQNIFNSQ
RGLESRVESVLNRITQMQKISCTGNQAPNVRVAIMAQARGGPVEGLDFSEYEPELFERFQ
GMRTRGPYFLTADTLRSYLNKFRSEPSSSTKVIIHFTDGADDSIDQLEAASSALHAEGVS
ALIFVGLDRVSNFDKVMQLEFGRGFTYNRPLRVNLLDLDFELAEQLDNIAERMCCKVPCK
CSGQRGDRGVLGPIGPKGATGDLGYGGYPGDEGGPGERGPPGVNGTQGFQGCPGHRGTKG
SRGFPGEKGELGEMGLDGIDGEEGDKGFPGSSGEKGYSGRRGDKGIKGERGERGDRGLRG
DPGDSGADNTQRGSRGQKGEIGPMGEPGPVGLDGQGGGVGRKGMTGRRGPIGVKGTKGSL
GQAGPAGEQGMRGPQGPSGQLGTPGIRGEQGVPGPRAGGGPPGTTGERGRIGPLGRKGEP
GNPGPKGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGERGFIGYPGPKGGPGDRGGAGGPG
PKGNRGRRGNAGDPGTPGQKGEVGYPGPSGLKGDKGESRDQCALVRNIKDKCPCCYGPKE
CSVFPTELAFAIDTSSGVMKDVFNRMKQTVLRVVNNLTIAESNCPRGARVALVTYNNEVT
TEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRARSGFLMRKVAVFF
SNGDTRTSPQLNDAVLKLYDAGVMPVFLTSRQDPVLTRALEINNTAVGHAIVLPTSSSQL
NETIRRLLTCHICLDVCDPDPVCGFGSQRPVFRDRRAAPTDVDTDIAFIMDSSESTTPLQ
FNEMKKYISHLISNLEISSEPEVSQHHARVAVLQQAPYEYETNSSFPPVKTEFSLTDYGS
KEKIINYLHNQMTQLHGTRAIGSAIEHTMAHIFESAPNPRDLKVIVLMMTGKVNKQELEY
LQKVVTDAKCKGYFFVVLGIGRKVNAKNIYSLASEPNDVFFKLVDKPGELHEEPLLRFGR
LLPSFIRSEFAVYLSPELTKQCKRFQSDQQAKSQSPGHAGHKAVYVAPNATISRTLSAST
TVSASIKPVASANARARTTTASTTVQTKATDQTTASTVVQVNTTAQSTASTAAHAKATGR
TTASTTAAAAGGRRRQSAKTHDIQITDVTENSARLRWASPEPHNAYAFDITITLAHDHSL
VQKQNLTGTEHVIRGLRSGQKYLVVITGYQKSQPKVTYTGTFSTKTPAQPKVSLANMMLN
TEPLEGPESVMDICRLQKDEGTCRNFVLKWYYDPETKSCARFWYGGCGGNENRFNTQKEC
EKVCVSGNINPGAVTMIGT
NT seq
9420 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacaccgacatctgccctttgtggcaatgttttgcctgctactctcaggcttt
tgctcggttcgtgcccagcagcaagcagctgtcaaaaccgttgctgtggctgatataata
tttctagtggattcctcctggagcattgggaaggaacatttccaacttgttcgagagttt
ctgtatgatgttgtaaaagctttagatgtgggaggaaatgattttcgctttgccctggtc
cagttcagcggaaacccccatacagagttccagttaaatacctacccctctacccgagat
gtcctgtcccatattgccaacatgccttacatggggggaggcaccaagactggaaaagga
ttagagtacctaatcgagaaccatctcactaaagctgctggaagcagagccagcgaaggc
gtcccccaggttattatagttttaacggacggacgatcccaggatgatgtggctctgcca
tcatctgtccttaaatcggcccgtgtaaacatgtttgcggtcggcgtgcaggatgcagtg
gaaggggaattaaaggaaatagtgagcgaatccttcgatacgcaccttttcaacctagag
aattttactgctctccacggcatagttggagacttagtggcaagtgtccgttcatccatg
actccagaaaaggctggggccaaaggactggttaaagacatcacagctcaagagtccgct
gaccttattttccttattgacggatcaaacaacatcggaagtgtcaattttcaagccata
cgtgatttccttgtaaatttgattgaaagcctcagagttggagctcagcaaatacacatt
ggggtggtgcagtatagtgatcaacccagaaccgagttcgctttgaacagctactccaca
aaagcggatgttctggatgccgtgaaggcacttagtttccgcggtggcgaggaagcgaac
accggtgcggcactggagtttgtggtggagaacctcttcacccaggcgggaggcagcagg
atagaggaagcggtgcctcagattttagtgctgataagtggtggagagtctagtgatgat
atccgagagggcttgttagcggtgaagcaagctagtatattttcatttagcattggggtc
ctgaatgctgacagtgcagagctgcagcagattgctactgatggaagcttcgcatttact
gccctggatatccgtaaccttgatgctcttcgagaattgttactgcccaacattgttgga
gtggcccaaagactcattttgttagaggccccaaccattgtgactgaagttattgaagtg
aacaagaaggatatagtcttcctgatagatggctcaactgctttggggactggccccttt
aactcaattcgtgatttcgttgccaaaattgtccaaaggctggaggttggacccgacctg
atccaagtcgcggtggcacagtacgcagacactgtgaagccagagttttattttaacacc
caccagagcagaaaggacgtgatggctaacgtgaagagaatgaagctcatgggtggtaca
gcactcaacactggctcggcactggactttgtgaggaacaacttcttcaccagtgctgcc
gggtgcaggatggaggaaggggtgcttcccatgctggtgctcatcactggcggtaagtcc
agggatgccgttgacgaagctgcggcagagatgaaaaggaaccggatagtgatccttgcc
attgggtcgagaaacgctgacctggcagaacttcaagaaattgcccatgagagagatttt
gtgttcaacccaaatgacttccgtgttcagttcatgcaagccattcttcctgaagtgctg
tcacctatccggacactctctggaggactgattatccaagaaccaccatcagttcaagta
accaaaagggatatcatctttcttttggatggatcactcaacgtcggaaatgccaacttc
ccctttgtgcgtgactttgttgccaccctagttaactaccttgatgtcggcagtgacaaa
atccgagttggcttagtgcaatttagtgacactcctaaaaccgagttctttctatactcg
taccaaaccaaatcagacataattcaacgtatggggcagctgaggcccaagggggggtca
gtgctgaacactggctctgcactgaactttgtgctttcgaatcacttcacggaagctggt
gggagcagaataaatgaacaagtgcctcaggtcctagtcctggtgacggcagggaggtct
gctgatcccttcttgcaagtttccaatgaattagctcgggctggagtgctgacttttgct
gttggagttaggagtgcggataaggcagaacttgaacagattgcctttaatccaagaatg
gtatattttatggatgatttcagtgctctggcagctttaccccaggagttaaataagcct
ataacaacatatgttagtggaggtgtggaagaggttccactcgccccaacagaaagcaag
aaagatattttattcctgattgatggctcagccaacctcttgggtagctttcctgccgtc
cgggattttgtacacaaagtcatttctgacctgaacgtgggtcctgatgccacacgagta
gctgtagctcaattcagtgacaccatccaagttgaatttgactttgccgaactcccatct
aagcaagacatgcttctcaaagtgaaaaggatgaagataaaaaccgggaagcagctgaac
attggagctgcgctagatgaagctataaggaggctgtttgtgaaggaagccggaagcagg
atcgaagaaggggttcctcagtttttggtcctccttgctgctgggagatcaaccgatgat
gtggagcaaccgtcagatgctctgaagcaagctggagttgtgacctttgctatcaaagcg
aaaaatgctgaccccgtagagctggaaaggatcgtttacgccccgcagttcattctgaat
gtcgactccctccctcggatttcagagcttcagccaaacatagtcaacctgttgaaaact
atccagcttcagccaacagtagttgagagaggtgagaagaaggatgtggtgtttctaatt
gatggctcggatggtgtcagaagaggtttccctctactgaagacctttgtccaaagagtt
gttgaaagcctggatatcggtcgtgacaaggtccgtgtcgccgtcgcacagtacagcaac
gtcatacaacctgagttcttacttgacacccacgaagacaaagcagatctcatcagtgcc
atccaggagctgaaggttatgggaggatctcctctgaacactggagcagccctcgactat
ctcatcaagaatgtgttcacggtgtcgagcggcagcaggatagcggagggcgtcccacag
ttcctgattctgctgactgctgaccggtcccaggatgatgtgaggaggccgtcagtggtc
ctgaagacgagtggcacggtgccctttggcatcgggattggaaatgccgacctcacagaa
ctgcagacgatttccttcctcccagattttgctatctctgtgcctgacttcagccagctg
gatacagtgcagcaggtcgtctcgaacagagtcatccggctgaccaagaaagagatagag
tcacttgcccctgatctggtttttacatcacccagcccagcgggtgtgaagagggatgtc
gtgttcatggttgacggctcccgctatgctgcccaggagttctacctcgtccgtgatctt
attgagaggatagtgaacaacctggacgtgggctttgacaccaccaggatttcagtggtc
cagttcagtgagcatccccacgtggagttcctgctcaacgctcactccaccaaggatgag
gtgcagagtgctgtgagacggctgcggccgcagggtggccagcaggtgaacgtgggggag
gcccttgagtttgtggcaaagaccatcttcacccggccctctgggagccgcatagaggag
ggcgtccctcagtttttgatcatcctctcctcccgcaagtccgacgatgacttagagtac
ccatcactccaagtcaaacaagtgggggtggcacctatggtggtagcgaagaacgtggat
cctgaggagatggtacagatttctcttagtcctgattatgttttccaagtctccagcttc
caggaactgcccagcctcgagcagaagctgctgactcctattgaaacgctgactggggac
caaatcagacggctgctgggagatgtgcaaccccccgtagatatttctggtgatgaaaag
gacatagtcttccttattgacagctctgacagtgttaggcctgacgggcttgctcacatt
cgggatttcattagcagaattgttcagcagctggaagttgggccaaacaaagtgcgaatc
ggtgtggtgcagttcagcaataacgtcttccctgagttctacctgaagacccacaagtcc
aaaaatgccgtcctgcaagccatccgccgcttgaggcttagaggagggttccccgtgaac
gctggcaaagccctagactacgtggtgaagaactactttatcaagtctgcggggagcagg
atagaagatggagtgccccagcacctagtcgtcatcctcggagaccggtcccaggacgat
gtgaacaggcctgctaacgtgatcacttcgaccagcattaaacctctgggtgtcggagcc
aggaatgtggacagggaccagctgcaggtcattaccaacgatcctgagcgtgtgcttgtg
gtacaggacttcacaggactcccaactttagaaaagaatgtgcagagcattcttgaagag
cttccgatacctacaacagaaacccctggacctttaggacctggaggcaaaaagcaggct
gacattgtgtttttgctggatgggtccatcaatctggggagggataacttccaagaagtt
ctccagtttgtctactctgtggtggacgccatttatagggatggagactctatccaggta
ggactggcccagtacaactcagatgtcaccgatgagtttttcctcaaggactactccacc
aaacctcagattttagatgccatcaacaaagtcatctacaaaggcggccgagtggcaaac
actggcgcagccatcaaacacatccaggcaaaacactttgtgaaggaggccggcagccga
atcgaccagagggtgccccagattgccttcatcgtcacgggtgggaagtcatcggacgac
gggccgagtgcctccttggaaatcacgcagaaaggcgtcaaggtatttgcggttggcgtg
agaaacattgacctcaaggaagtcagcaggctggccagcgagagtgccacgagtttcaga
gcatccacagcccaggagctgtctgagctgaatgagcaggtcctggttacgctggaagcc
gctatggaggagaaattgtgcccaggaacgacagacgttacaagagattgcgacttagat
gtgatacttggcttcgatgtcacagatgtcgggcctggccaaaatatatttaattcccag
agaggtctggagtccagagttgagtccgtgctgaacagaataacgcagatgcagaagatc
agctgcaccggcaaccaggcacccaatgtcagggtagccatcatggcccaggctcggggg
ggacctgtggagggactggacttctccgagtatgagcctgagctcttcgagaggtttcaa
ggcatgcgcacccgcgggccctattttctcacagcagatacgctgaggtcctacctgaac
aaattcagatctgagccctctagcagcaccaaggtcataatccatttcactgatggtgca
gatgactcgatagatcagctggaggctgcttcatctgccttgcatgcagaaggtgtcagc
gctctcatcttcgtggggctggaccgagtgagcaattttgacaaagtgatgcagctggag
tttggtcgtgggttcacctacaacagacctctaagagttaatctgctggacttggatttc
gagctggcagagcagctcgacaacatcgcagagaggatgtgctgcaaagtcccatgcaag
tgctcagggcagagaggggacagaggtgtgctgggccccataggaccaaagggtgccacg
ggtgatcttggctatggaggctatcctggtgatgaaggaggaccgggtgagcgtggacca
ccgggtgtgaatgggacgcagggtttccagggatgccctgggcacagaggaaccaagggc
tctcggggattcccaggagagaagggcgaactgggagaaatgggtctggatggcattgat
ggagaagagggagacaagggtttcccaggctcttctggagagaagggatactccggcagg
aggggtgataagggaattaaaggcgaacgaggagaacgaggtgaccgtgggctccgcgga
gacccgggagattcaggagctgataatactcaacggggatccagaggccaaaagggtgaa
attggaccaatgggagagccgggaccggtggggctggatggccaaggtggtggagttggg
aggaagggtatgacaggacgaaggggaccaataggagttaagggtaccaagggctcgctc
ggtcaagcagggccggctggagaacaaggcatgagagggccacagggtccttctggccag
cttggcacaccaggcataagaggagaacagggcgttcctggacccagggctggtggtgga
ccaccaggaaccacaggagagcgtggcaggatcggtcccctgggacgaaagggtgagcct
gggaaccctggacccaaagggccaaatggacagcagggcccacgaggagagatgggtgac
gatggacgagatggaattggtggcccaggtcctaaaggcagaaagggagaacgtggcttc
ataggctacccagggcccaagggtggacctggtgaccgcggtggtgctggaggccccggc
cctaaaggaaacagaggccgcaggggaaatgcaggagatcctgggacacccggtcagaaa
ggagaggttggataccccggaccatctggacttaaaggtgataaaggagaatccagagat
caatgtgcgcttgtgcggaacatcaaagacaaatgcccttgctgctatggtcccaaggag
tgctctgtcttcccaactgagctggcctttgctatcgacacctcctcgggagtcatgaag
gatgttttcaacaggatgaagcaaactgtgctcagagtggtcaacaacttaaccatcgct
gaaagcaactgtcctcggggtgcccgggtggctctggtcacctacaacaatgaggtcacc
acagagatccgctttgctgatgccaggaagaaatcgagcctcctccagcagatccaaaac
ttccaggccacactgaccacgaagccacgcagcctggagaccgccatgtccttcgtggcc
aggaataccttcaagcgtgcccgaagtggcttccttatgaggaaggtggctgtctttttc
agcaacggggatacgagaacctccccgcagctcaacgatgccgtgctgaaactctacgat
gccggggtcatgcctgtattcctcaccagcaggcaggacccggttctcaccagagctctg
gagatcaacaacacagcggttggacatgcaattgttcttccaaccagcagcagtcagctg
aatgaaactatccggaggctcttgacttgtcacatttgtctggatgtgtgtgaccctgat
cctgtctgtggttttggtagtcagagacctgtattcagagacagaagggcagccccaaca
gatgtagacactgacatagccttcatcatggatagctcagagtccaccacccctctgcag
ttcaacgagatgaagaagtacatttcccacctcataagtaacctggaaatcagctctgag
ccagaagtatctcagcaccacgcaagagtggcagtcctccagcaagctccttatgaatat
gaaaccaactcaagcttcccaccagtaaaaactgagttttcactaactgattatggatcc
aaagagaagatcattaactaccttcacaaccaaatgacccagctccatggcacgagggct
ataggaagtgcaattgaacacacaatggctcatatttttgaaagtgcaccaaaccctagg
gatctaaaagtcatagttctgatgatgaccggaaaagtgaataaacaagaacttgagtac
ctgcagaaggttgttactgatgcaaaatgcaaagggtacttctttgttgtcttgggcatt
ggcaggaaggtgaatgccaagaatatctacagcctagctagcgagccaaacgatgtgttc
ttcaaactggtcgataaaccaggagagcttcatgaagagcccttactacgctttgggaga
ctgctgccatcttttatcagaagtgagtttgctgtctacctgtctccagagttaacaaaa
cagtgcaagaggttccagagtgatcagcaagccaagagccagagccccgggcacgctggg
cacaaggcagtgtacgtggcacccaacgcgaccataagccggaccctcagtgccagcacc
acggtcagtgcgagcatcaagcctgttgcaagcgccaacgcccgtgccagaaccaccact
gccagtaccacggtccagaccaaagccaccgaccagaccacagccagcactgtggtccag
gtgaacaccactgcgcagagcacagcaagcactgctgcccacgccaaagccaccggccgc
accactgcaagcaccacggctgctgcggcaggtggcaggagaagacaaagcgcaaagacc
cacgacatccaaatcacagatgtcaccgagaacagtgccaggctgcgctgggccagccct
gagccgcacaacgcctacgcttttgatatcaccatcaccttagcacatgaccactctctc
gtacagaagcaaaacctgaccggcactgagcacgtcatccgaggactcagaagcggacag
aaataccttgttgtcattaccggctaccagaaatcccaacccaaagtaacctacacaggg
acattcagcacaaagaccccagcgcagcccaaggtgtccctggccaacatgatgctcaac
accgagccgctggaaggacctgagagtgtcatggatatctgccggctgcaaaaagacgag
gggacctgcaggaactttgtgctgaaatggtactacgaccccgagaccaagagctgcgcc
cggttctggtacggtggctgcggaggcaacgagaacagatttaacacacagaaagaatgt
gaaaaagtttgtgtctctggtaacatcaaccctggcgcggtgacgatgataggaacatag
DBGET
integrated database retrieval system
