Pygoscelis adeliae (Adelie penguin): 103921755
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Entry
103921755 CDS
T06012
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03020
RNA polymerase
padl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103921755 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
103921755 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
padl03021
]
103921755 (POLR2B)
03400 DNA repair and recombination proteins [BR:
padl03400
]
103921755 (POLR2B)
Enzymes [BR:
padl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103921755 (POLR2B)
Transcription machinery [BR:
padl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103921755 (POLR2B)
DNA repair and recombination proteins [BR:
padl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103921755 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
103921755
NCBI-ProteinID:
XP_009328043
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDL
QAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVD
ITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFII
NGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGA
KKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDE
AFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGY
MVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK
DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNS
PIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEE
WSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDI
REREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDT
LEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSA
MGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTG
YNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGMRHAIYDK
LDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSETGIVDQV
MVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIII
NPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEV
LYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFG
EMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQIS
LVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgatgaagacgatgatgaaatcacccccgacttgtggcaagaagcctgctgg
atcgttattagctcctattttgatgaaaagggtttagtcaggcaacagttggattctttt
gatgagtttattcagatgtctgtgcagagaattgttgaagatgctccaccgattgattta
caagctgaagcccagcatgccacaggagaagtggaagagccgccccggtatctgttgaag
tttgaacaaatctatctctccaaacctacacattgggaaagagatggagcaccctcacct
atgatgcccaatgaagccagactgagaaaccttacgtattcagcccccttgtatgtggat
ataactaaaacagttattaaagaaggggaggatcagttacagacacagcatcagaaaact
tttataggaaaaattcctattatgttacgttcaacatactgtttgttgaatggcttaact
gaccgtgatctttgtgaactgaacgaatgcccgcttgatcctggtggctactttatcatt
aacggatcagaaaaggttctgattgctcaagagaaaatggctacaaacacagtatatgtg
tttgcaaagaaggattcaaaatatgcctacacgggagagtgtagatcttgtctggaaaat
tcctctcgaccaacaagtactatatgggttagcatgctggccagaggtgggcagggtgca
aagaagagtgctattggtcagcgcattgtagcaactttgccatatatcaaacaagaagtc
cccatcataattgtctttcgtgcgctaggctttgtgtccgacagggacattttagagcac
atcatatatgattttgaagatccagaaatgatggaaatggtcaaaccttctctggatgaa
gcgtttgtcattcaggagcaaaatgttgctctaaacttcattggatcaagaggtgcaaag
ccaggtgtcaccaaagaaaagagaatcaagtacgctaaagaagtcttgcagaaagaaatg
ctcccgcatgttggtgtcagtgacttctgtgaaaccaaaaaggcctatttcctagggtat
atggttcatagattgttgctggcagcactgggaagaagagagctggatgacagagatcat
tatggcaacaaaagactggatcttgctgggccactgttagctttcctgttcagaggaatg
tttaagaacttgctgaaggaagtgagaatatatgcacaaaagtttattgacagagggaaa
gatttcaacttggaactggcaattaaaacaagaattatttcagatggtttgaagtattca
ttggcaactggaaactggggtgaccagaagaaagctcatcaggccagagcaggagtatct
caggtgttaaaccgcttgacttttgcatctacgctttcccatctgagacgcctgaattct
ccaattggtagagatggtaaactggcaaagcccagacagctgcacaatacgctgtgggga
atggtttgccctgctgagactccagagggtcatgcagtaggacttgtgaagaacttagcc
ctgatggcttacatttctgtggggtctcagccgtcgccaattttggaattcttggaagag
tggagtatggaaaacctggaagaaatatctccagcagcaatagctgatgctaccaagatc
tttgttaacggctgctgggtaggaatacacaaagatccagagcagctcatgaatacccta
aggaagctccgtcgtcagatggacatcattgtgtcggaggtctcaatgattagggatatt
cgtgagcgagaaattcgcatctatactgatgcaggcagaatttgtcggccccttttaatt
gtggaaaaacagaagttgctgttgaagaaaaggcatattgaccaactgaaggaacgagag
tataacaattacagttggcaggatctcgtggccagtggtgtagtagagtacattgataca
ctggaagaagagactgtgatgctggcaatgactccagatgacttgcaagagaaaggtgtg
gcatattgttcaacatacacacactgtgagattcacccatctatgatcctgggagtatgt
gcatctattatccctttccctgatcacaaccagtctcccaggaacacataccagtctgct
atgggtaaacaggctatgggagtttacattacaaactttcatgttcgtatggatacgctg
gcacatgtgttgtattatcctcagaagccccttgtaacaacacgctccatggagtacttg
cgatttagagagttaccagcaggtatcaattcgattgtagccattgcatcatacacaggc
tataaccaggaagactctgtcatcatgaaccgttctgctgttgacagaggctttttcaga
tctgtgttctatcgctcatacaaagagcaagagtctaaaaaagggtatgaccaagaggaa
gtttttgaaaagcctacacgcgaaacttgccaaggtatgagacatgcaatctatgacaaa
cttgatgatgatggtttgatagcacctggggtacgtgtgtctggggatgatgtcatcatt
ggcaaaacagtaacgctgccagaaaatgaagacgaactggaaagcactaatagacgtttc
acaaagagagactgtagcacttttctgcgaactagtgagactggtattgtagatcaagtc
atggtaacccttaaccaggaaggatacaagttctgcaagattagggtacgctctgtaaga
atcccacaaattggagataaattcgctagcagacatggtcagaaaggaacctgtggtatc
cagtacaggcaggaggatatgcccttcacctgtgaaggcatcacacctgatataattatc
aacccccatgccatcccttcccgcatgaccattggtcacttgattgagtgtcttcagggg
aaggtgtctgcaaacaagggagaaattggtgatgctacaccttttaatgatgctgtcaat
gtgcagaagatttccaatcttttatcagattatggctatcatctaagaggaaatgaggtc
ctctacaatggcttcactggtcgaaaaatcacatcacagatcttcattggtcctacatat
tatcagcggctgaagcacatggtagatgacaaaatccattctcgtgcaagagggccaatc
caaatacttaacagacagcccatggaaggtagatctcgtgatggtggccttcgttttgga
gaaatggaacgagattgccagattgctcatggagcagcccagttcttgagagaaagactg
tttgaagcttcagacccgtaccaagtccatgtctgtaacctctgtggaatcatggcgatc
gcaaacacaaggactcacacctatgaatgccggggatgccgtaataaaactcagatatct
ttggttcggatgccctatgcctgcaaactcctcttccaagaactgatgtctatgagtatt
gcacctcgtatgatgagtgtttaa
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integrated database retrieval system
