Pygoscelis adeliae (Adelie penguin): 103922168
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Entry
103922168 CDS
T06012
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl04512
ECM-receptor interaction
padl04514
Cell adhesion molecules
padl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103922168 (SDC1)
04514 Cell adhesion molecules
103922168 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103922168 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
padl04131
]
103922168 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
padl04090
]
103922168 (SDC1)
00535 Proteoglycans [BR:
padl00535
]
103922168 (SDC1)
Membrane trafficking [BR:
padl04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
103922168 (SDC1)
CD molecules [BR:
padl04090
]
Proteins
103922168 (SDC1)
Proteoglycans [BR:
padl00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
103922168 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
103922168
NCBI-ProteinID:
XP_009328531
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MHEVITLLYLVVSSLDILNSFEHCVLRQTGAVEQGFGFLFQQLNFCAVISSLTHLFPFSL
KQTTNLNLPPEDLDSSGDDDDAFSGSGAGPLTDQSRTWIIPGEPTNFSLLATPMDFGKQP
FPGLESRTEKEVVSPSATSNVVTEEPVVAVKDEVPILGSPDEKPANDAVTTVRSPTTHFP
SVVHVTPSEASGTVHELEPKIPSSDASDTKDVPEPYSTIHHEGDFAATPTTTTPKDIVPT
HEDISEDGSGDPGDFILTKDEDLVPTQNSEVLADSGRNAKASGASGIMERKEVLGGVIAG
GLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKPHKQEEFYA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtaatcactctgctttatttagtggtgtcttctttggatatcctgaacagc
tttgaacattgtgtgttacgacaaacaggtgcagtagaacaagggtttggcttcttgttt
cagcaactgaacttctgcgctgtaatctcatcgctaacacaccttttccccttctcttta
aagcaaactacaaatctgaaccttcctcctgaagatcttgattcatctggtgatgatgac
gatgcgttctcaggttcaggtgcaggtcccctgactgaccagtctcgcacctggataatc
ccaggagaaccgactaatttctcattactggcaacaccaatggatttcggcaaacagcca
tttcccgggcttgagagccgaactgaaaaggaagtagtatctccttctgcaactagtaat
gtagtgacagaggagccagttgtagctgtgaaggacgaagtacccatcctgggctcgcct
gatgagaaaccagcaaatgatgcggttacaacagtgagaagccccactactcactttcct
tcagtggttcatgtaactccttcagaagcctcaggcacagtccatgagctcgaacctaaa
atccctagctctgatgcgtcagacactaaagacgtgcctgagccctactctaccatccat
catgagggagacttcgctgccactcccacgacaacaactccaaaggacattgttcctaca
catgaggacatttctgaagatggctctggagacccgggagacttcatcttgactaaagat
gaggatttggtccccacccagaactcagaagtactggctgactctgggaggaatgccaaa
gcatcaggagcctcgggaattatggagagaaaagaagttcttggaggtgttattgctgga
ggactagtaggcttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaag
aaaaaagacgaaggcagctattcactggacgaaccaaaacagtctaatggaggataccaa
aaaccacacaaacaagaagaattctatgcataa
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