Pygoscelis adeliae (Adelie penguin): 103922255
Help
Entry
103922255 CDS
T06012
Symbol
CNOT1
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103922255 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
padl03019
]
103922255 (CNOT1)
Messenger RNA biogenesis [BR:
padl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103922255 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103922255 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
103922255
NCBI-ProteinID:
XP_009328639
LinkDB
All DBs
Position
Unknown
AA seq
2377 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVXXXXXXXXXXXXXVAKVLESSVRSVVFRPPNPWT
MAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAP
KKDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPT
IPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRV
AAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDN
CELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRL
KVGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTEL
EQHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADAD
LLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNM
QQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSR
GNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREW
VNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQH
NPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHD
VRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWL
ELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVL
LVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEIN
IAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALV
LYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNS
HTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWN
HEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagtacaagaggtgatttttggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagtttatcaaacagaaactcccagatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctatcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtacaagtgtcgaagaatgtcgcaacataatcatgcagttc
ggtgttcgggaagtcacggctgcccaggttgccagggttttggggatgatggctcgaact
cattcggggttgacggatggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgatgggaaagataaaagtgatggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagaactgaaccctagcctggacttcaaagtagtaacctatgaa
ttggaccatccgggatttcagattcgtgacagcaagggcctgcatattgtagtgtttggt
atccagagagggctgggcatggaagtttttccagttaatgccatatacagaccgtggaag
cacgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgattgaatctctgttacgattg
gcagaagtgggacagtatgaacaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgttggtattggccttattgcagatcaacacgtcctggcataccttgcgccat
gaactcatctccacgctcatgccaattttccttggcaaccatcccaactctgccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgtatgactttctta
aagcgaagatgtccatctatcctgggtggccttgctccagaaaaagatcagcccaaaagt
gctcagcttcctccagaaaccttggcgactatgttggcatgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagctaactgcagtaatgtc
atgaacaaggctagacagccaccacctggagtcatgccaaaaggacgcccgcccagtgct
agcagcttggatgccatctctcctgtacagattgactcgcttgcaggaatggcatctctt
agtttaggtggctcggctgctcctcatacccagagcatgcaaggcttccctccaaacttg
ggctctgcattcagtactccccagtcaccagcaaaagcgttcccccctctttccacccaa
aaccagacaacaggtttcagtggcatcggaggactctcttcacagcttccagtaggtggt
cttactacgggtagcctgactggcataggaaccggagccctgggccttcctgcggtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttacaaccatccacca
catcccaccatgtctgtagatgaggtcttggaaatgctgcagaggtttaaggactccaac
attaaacgggaacgagaagtatttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggtcacttatatggcattgggcctggccctgcgctacgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccgcatcatttacaggagtacatagaatatggacagcaatctagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccgaccaactggagtc
agcttcaagaaggatgtgccgccttccattaatactaccaacattgatacgttgttagta
gcaacagatcaaactgagagaattgtggaacctccagagaacgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagaattgaaggaa
acagtgaaagaagagttcatgccttgggtatcacagtatcttgtgatgaagagagtcagt
attgagccgaattttcacagcttatattcaaacttccttgacacacttaagaatccagag
tttaataaaatggttctgaatgaaacctacagaaatatcaaggtgctactgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaaccttggtcactggctggga
atgattacgctggctaaaaataagcccatcttgcacacggatttggatgtgaaatcgcta
ctactggaagcatatgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttgtt
gccaaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccatggaca
atggccattatgaatgttttagctgagctgcatcaagaacacgatctaaaattgaatctg
aagtttgagattgaagtgctctgcaagaatcttgcactagacatcaatgagctgaaacct
ggaagtctcctgaaagataaggatcgtctgaaaaatctggatgagcagctgtctgctccg
aagaaggatgtgaagcagccagaagagctaccacccatcacaacaactactgcttctaca
actccagctaccagcactacttgtacagccacggttcctccacagccccagtacagttat
cacgacatcaatgtttattctttaggagggttggctccacatattaccttaaatccaacg
attccgctgtttcaagcccacccacagttgaagcagtgtgtgcggcaggcgatagagcga
gcagtgcaggagcttgtccatccggtggttgatcggtccattaagattgctatgactact
tgtgagcagatagtcaggaaggactttgcactggattcagaggagtcacgaatgcgtgtg
gccgcacaccatatgatgcggaacctgactgctgggatggccatgattacctgcagggaa
cctttgctgatgagcatagctaccaacttgaaaaatagttttgctactgcactgagggca
gcctccccacaacagagggacatgatggagcaagcagctgcccagttagcgcaggataac
tgtgagctagcatgctgctttatccagaagacggctgtggagaaggcaggccctgagatg
gacaagaggctcgcaactgaatttgagctcagaaaacatgctagacaagagggtcgtcgg
tactgtgatcctgttgtgttaacttaccaggctgagcggatgccagaacagatcaggtta
aaggttggaggtgtggacccaaaacagctggctgtttatgaagagtttgcacgcaatgtc
cctggcttcttgcctaccaatgacttaactcagcctacaggattcttggctcagcctatg
aagcaagcttgggctacagatgatgtagcacaaatctatgacaaatgtatgacagaactg
gagcagcacctgcagtccattccacacaccctggccatgaatcctcaagctcaagcattg
cgcagcctcttggaggctgtggtagtggctcgtaactcccgtgatgctattgctgcactt
ggactactgcagaaggctgtagagggcttactggatgccaccagtggggcagatgctgac
ctcctgcttcgctatcgtgagtgtcatctgcttgtgctgaaggctctgcaggacggccgt
gcgtatggatctccgtggtgtaataaacaaattactaggtgcctgattgaatgcagagat
gagtacaagtacaacgtggaagctgtggagctgctaatccgcaatcaccttgttaacatg
cagcagtatgaccttcacttggctcagtcaatggagaatggcttgaactacatggctgtg
gcatttgccatgcagctggtaaagatcctgttggtggatgagagaagtgttgcccacata
acagaggcagatctgtttcacacaattgagacactcatgaggattaatgctcattccaga
ggaaacgccccggaaggattaccccagctgatggaagtggtccgatcaaactacgaagcc
atgattgaccgtgctcacggaggtcccaatttcatgatgcattcgggaatttcccaagcc
tctgagtatgatgatccgccaggtctgagggagaaggcagaatacctgctgcgggagtgg
gtgaacctctaccattcagctgcagcaggccgtgacagtaccaaagcattctctgcgttt
gttggacagatgcaccagcaaggaatcctgaaaacagatgacctgatcacccgttttttc
cgtctttgcaccgaaatgtgtgttgaaatcagctatcgtgctcaggctgagcaacagcat
aatcctgctgccaaccccactatgattcgagccaagtgctaccacaatctggatgccttc
gtgcgacttattgcactgctagtgaagcactcaggggaggcaaccaacacagttacaaag
atcaacctcctgaataaggttctcggtattgtggtgggagttcttctgcaagaccatgat
gttcggcagagtgagtttcagcagcttccttaccatcgcattttcatcatgttactgttg
gaattgaatgctcctgagcatgtgctggagaccatcaacttccagacactaacggctttc
tgtaacacatttcacatcctgaggcctacaaaagcgccaggttttgtttatgcctggctg
gaactgatctcccatcggatatttattgcaagaatgctggcacatacaccacagcagaag
ggttggcctatgtatgcccagttactgatcgatctcttcaagtacttggctcctttcctt
agaaatgtggaactcaccaaacctatgcaaattctttacaagggcactctgcgtgtgttg
ctggtcttgttgcacgatttcccagaatttctttgtgactaccactatgggttctgtgat
gtgatcccacctaactgtattcagctaaggaatctgatcctgagtgccttcccacggaac
atgaggcttccagaccctttcacccccaatctaaaggtggacatgttaagtgagattaat
attgctccacgaatactcacaaatttcactggagtgatgccacctcagttcaagaaagac
ttggattcctatctcaaaacccggtctccagtcacttttttgtctgacttgcgcagcaac
ctacaagtatcaaatgaacctggcaaccgctacaacatccagctgattaatgcactggtg
ctctacgtaggtactcaagctattgcgcacattcacaacaaaggcagcacaccctctatg
agcaccattacccactcagctcacatggacatcttccagaacttggcagtagacctggac
actgaaggccggtaccttttcttgaatgcaattgccaatcagctgcgataccccaacagt
cacacccactacttcagttgcaccatgctgtacctgtttgcagaggccaacactgaggct
atccaggagcagatcactagggttctcttggaacgactgattgtaaataggcctcatccc
tggggtctccttattaccttcattgagctgataaaaaacccagcgtttaagttctggaac
catgagtttgttcactgcgctccagaaattgagaagttgttccagtcagttgcacagtgc
tgcatggggcagaagcaggcccagcaagtaatggaagggactggtgccagttag
DBGET
integrated database retrieval system
