Pygoscelis adeliae (Adelie penguin): 103923475
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Entry
103923475 CDS
T06012
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
padl03019
]
103923475 (PTBP1)
03041 Spliceosome [BR:
padl03041
]
103923475 (PTBP1)
Messenger RNA biogenesis [BR:
padl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
103923475 (PTBP1)
Spliceosome [BR:
padl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103923475 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
103923475
NCBI-ProteinID:
XP_009330110
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MDGIVQDITVGTKRGSDELFSTCVTNGPFIMSSNSSSAANGNDSKKFKGDSRSAGVPSRV
IHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTPV
LRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAP
GIISASPYAGAGFPPAFAIPQAAGTVFRLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPG
LAGAGNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLA
MSHLNGQKLHGKPIRITLSKHQTVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIF
PPSATLHLSNIPPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLID
LHNHDLGENHHLRVSFSKSTI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtccaagatataacagttggtacaaagcggggatctgacgagcttttc
tctacttgtgttactaacggaccctttatcatgagcagcaactcttcttctgcagctaat
ggaaatgacagcaaaaaattcaaaggtgatagtagaagtgctggggtcccatcccgagta
atccacgtccgtaaactccccagtgacgtcacggaggcagaggtcatttctttgggctta
ccttttggcaaggtcaccaatcttctaatgttgaaaggaaaaaatcaggctttcatagaa
atgaatacagaggaggcagccaacaccatggtaaactactacaccacagtcactccagtc
cttcgaagccagcccatctatattcagttctccaaccacaaggagcttaagacagacaac
tctccaaaccaagcacgtgcccaagcagctctgcaagcagtgaattctgttcagtctgga
aacctagcgctgtcagcctctgctgcagcagtagatgcaggaatggcgatggctggccag
agccctgtcctgaggatcattgttgagaatctcttctatcctgtcactctagatgttctg
catcagattttttccaaatttggtacagtcttgaaaataattacattcacgaagaacaac
caatttcaggccctgttacaatatgctgacccagtgagtgctcagcatgccaaactgtct
ttagacggacagaatatctacaatgcctgttgtacgctgcgcatagatttctcaaagctc
acgagtctcaatgtaaaatacaataacgataagagcagagattatacacggccagaccta
ccttctggggataaccagccctctcttgatcagaccatggcagctgcttttggtgcccca
ggaataatttctgcttctccatatgcgggagctggctttcctcctgcctttgcaattcct
caggctgcaggtactgtatttcgcctgtcagttccaaatgttcatggagcactagctcct
ttggctatcccatcagcagcagctgcagcggctgcagcaggacggattgccattcccggc
ctcgctggggcagggaactccgttctgctggttagcaatctgaatcctgagagagttaca
ccccaatgcctctttattcttttcggagtctatggtgatgtgcaaagggtgaagatttta
tttaataagaaagagaatgccctagttcagatggctgatggaaaccaggcccagcttgcc
atgagccatttaaatggtcagaagcttcacgggaagccaatccgtataacattgtccaag
catcagacagtacaacttcctcgtgagggacaggaagaccaaggtctgactaaggactat
ggaaattctcctctacatcgtttcaagaaaccaggctccaaaaacttccaaaacatcttt
cccccttctgccactcttcatctgtccaatattccaccttcaataactgaagaagatctt
aagatgttgttttcaagcaacggtgggatggtcaaaggattcaaattcttccagaaggac
cgtaaaatggctctgatccagatgggctctgtggaagaagccattcaatcactcattgac
ctccataatcatgacctgggtgagaatcatcacctgcgtgtgtccttctcgaagtccacc
atttaa
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