Pygoscelis adeliae (Adelie penguin): 103923534
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Entry
103923534 CDS
T06012
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103923534 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
padl03021
]
103923534 (POLR1A)
Enzymes [BR:
padl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103923534 (POLR1A)
Transcription machinery [BR:
padl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103923534 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
HMG_box
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
103923534
NCBI-ProteinID:
XP_009330183
LinkDB
All DBs
Position
Unknown
AA seq
1721 aa
AA seq
DB search
MAAEGWGATGLSVGLSDPLRGLGGHAGGLGGVGKGCGARERKLSVKPITNPQYLDNVGNP
AINGLYDLALGPPDSKEVCATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCL
NCHMLTCTRAVVHLLLSQLKVLEKGLLHAVHDLEVILNRFLEQCADATGAEIEEELNHHV
HEILQSHQVRDQCSNVKNVCECRNKLIAQFWKAHMSSKKCPNCKSRRSLVRKEHNSKLTV
TYPSTVYHKSGEEGSLDEPAAIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGM
DPHESSGFSPDLFFLDLLVVPPSRYRPVNRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVF
MAKEQCQPIKIAEEEIQTETGENNEPLDNSVLTMIPGQTIADKLYNAWIRLQSHVNIVFD
SDMDKLMTEKYPGIRQLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFA
TKLTYPQPVTPWNVKELRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLL
TPSSGAPQSGLKIVCRHIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKA
YNADFDGDEMNAHFPQSELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTVR
GCFFTREQYMELVYRGLTDKKGKIKIFPPAIMKPQRLWTGKQVVSTLLINIIPENHIPLN
LTGKAKIGERAWVKGPANRRLNLDSMCESQVIIRNGELLCGVLDKAHFGSSAYGLVHCCY
EIYGGETSGKVLTCLGRLFTAYLQLYRGFTMGIEDILVKPEADHKRKKIIEKSTQHGIEA
VRAALNLPETASCEEVQGKWQDAHLCKDQRDFNMVDLKFKEEVNNYNNEVNKVCMPLGLH
RSFPENNLQLMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPS
SGGFVTGRFLTGIKPSEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLT
VRDSDGSVVQFLYGEDGLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMESHQAN
QQFKAIKKWRARHQNSVQREGGFLMFSQKKMASVKAQIPGGEVKNGRDPATLQLLKMWYE
LDEKKRRKYLKKANKCPDPSIGVWRPDTYFASVSETFENGVEDYINKWESENRRSYMRPA
LSSDRLKDLLYLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIP
RLREILMVASANIKTPTMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVEIEESLHVK
CKQNKHRLYKIKFHFLPHAYYREEKCVKPREILHFMETRFFKICLEAIKRKNAKVASFTE
VSTRKATRKDLDGDRDKNNQEAPAEEEENIVEAEADEGDGDATEAKRRKNQEEEVDYESE
EENGEENVDENLEDEEAESEKEERTPSAEDQIEADGDESQHLSFMSQTKKEKDRLLQSAE
VRVNAVLDSHPSIQDYTFDTENELWCEVSLTLPLMKVYFDLSSLLVSLARSTVIHEVKGI
TRCLLNESTNKQGEKELILHTEGINLAELFRYSDILDLNRLYSNDIHAMAKNYGIESALR
VIIKEIKDVFAVYGIVVDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYK
FLKEATMMGAHDELRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagggttggggggctactggactctctgtggggctctcagacccattgcgt
ggcctggggggtcacgctggaggtcttggaggagtggggaagggctgtggggccagggag
aggaaactgagtgtaaaacccataacaaatcctcagtatttggataatgtggggaatcca
gccattaatggactgtacgacttggctttgggacctccagactccaaagaagtgtgtgcc
acttgcatgcagaacttcagcaactgccctggtcattttggccatatagaactgcctctg
actgtgtacaaccctctgttttttgacaaattataccttctaattcgaggttcttgttta
aattgtcacatgctgacatgtactcgagctgtggttcacttactgctaagtcagctgaag
gttctggagaaagggttgcttcatgccgtccatgatcttgaagtcattctgaacaggttt
ttagagcaatgtgcagatgcaacaggtgcagaaattgaagaagagttaaatcaccatgtt
catgaaatactacaaagtcatcaagtaagagatcagtgttcaaatgtgaaaaatgtatgt
gagtgtagaaataaactgatagcacagttctggaaagcacatatgagttcaaagaaatgc
ccaaactgcaaatctaggagatcactagtgcgaaaagagcataacagcaagctgacagta
acctatccttctacagtgtaccataagtcaggagaggaaggcagcctggatgagccagca
gctattgatgaaagtcagttagggaagagaggatacctgacaccgatgactgccaaggaa
tacatcctggctctgtggaagaatgaaggtttctttttgcgttatctcttccctgggatg
gatccccatgagagttcggggttcagtccagaccttttttttttagatctactggtggtt
ccgccttcaaggtatcggcccgtaaatcgtgttggagaccgactgtttacaaatggtcag
acggtgaacttgcaggctgtcatgaaagatgccaaaatgatacggaagctcctggttttc
atggcaaaagaacaatgtcagccaataaaaattgcagaagaagaaatccaaacagagact
ggagagaataatgaacctctggacaattctgtcctgacaatgattccaggacagaccatt
gcagataagctgtacaacgcttggattcgtcttcagagccatgtcaacattgtatttgat
agtgacatggacaaactaatgacagaaaaataccctggtattcgtcagctattagagaaa
aaggagggactgttccgcaagcacatgatgggaaagcgtgtggattttgctgctcgatca
gtcatttgccccgatatgtacattggtaccaatgagattggcattcctatggtatttgct
accaaattgacttaccctcagccagtcactccctggaatgtcaaagagctgaggcaggct
gtcataaatggcccaaaggttcaccctggggcctccatggtcattaatgaagatggatct
cgtacagtgttgagtgcaagcagcctgacccagagggaagccatagctaagcagctcctc
actccttcttcaggcgcgccccagtcaggactgaagattgtatgtcgacatattaaaaat
ggagatgtccttttactgaaccgccagcccactcttcatagaccttccatccaagctcac
cgggcccgaatcctgcctggagaaaaagtgctgaggcttcactatgccaactgcaaggct
tacaatgctgattttgatggggatgaaatgaatgcccattttccacagagcgagctgggc
agagcagaagcctacaccttagcctttactgatgaacagtatctggttccaaaggatggg
aagccacttcctggcttgatccaggatcacatgatttctggagtcagcatgacagtccgg
ggctgctttttcaccagagagcaatatatggagcttgtttaccgaggactaacagacaaa
aaaggaaaaattaaaatctttcctcctgccattatgaaaccacagcgattatggacagga
aagcaggttgtttctacattgttaataaacatcattccggaaaaccacatcccactgaat
ttgactgggaaagctaagattggtgaaagagcctgggtaaagggacctgcaaacagacgt
ctaaatcttgattcaatgtgtgaatctcaggttattattagaaatggggaattactgtgt
ggagtgttggacaaagctcactttggcagctctgcctatggcctggtccactgttgctat
gaaatctatgggggtgaaaccagtgggaaggtgctgacatgtctaggacgtctctttact
gcttatctgcagctgtacaggggatttacaatggggattgaagatattttggttaaacct
gaagcagaccacaaaagaaaaaaaatcattgaaaagtcaacccagcatggtattgaagct
gttcgagctgctcttaatttgccagaaactgcatcatgtgaggaggtccaagggaaatgg
caggatgcccatctctgcaaagaccagagggattttaacatggttgatctgaaattcaag
gaggaagtaaacaattacaacaatgaagttaacaaggtttgtatgccccttggtctccac
aggagctttccagagaacaatttgcagttgatggtacagtcaggagccaaaggatccact
gtaaatacaatgcagatttcttgtttgttgggccagattgagttggaaggtcgaagaccc
ccactgatggcatctggcaaatcgctgccatgtttccagccttatgatttttcccctagc
tcaggaggatttgtgactggcagatttctcactgggatcaaaccttctgaattcttcttt
cactgcatggctggcagggaaggtcttgtggatacagctgtcaaaaccagccgttctggg
tacctacaaaggtgtatcataaaacatttggaaggactggtagttcagtatgacctgact
gtacgagatagtgatggcagtgtggtgcagtttctgtatggagaggatgggcttgatatc
cctaaaactcagttcttgcaacctgagcagtttcctttcattgcagaaaactatgaggta
atccagaagacaaaccatctggatgaagctttagcaaggatggagtctcaccaagctaac
cagcagttcaaagccatcaaaaagtggcgagccaggcaccaaaactctgtgcaaagagaa
ggaggttttctgatgttttcccaaaagaaaatggcaagtgtaaaagcacagattccagga
ggagaagtcaagaacggaagagatcctgctactttacagttattgaagatgtggtatgaa
ctggatgagaagaaacgaagaaagtatctgaagaaggcaaataagtgtcctgacccaagc
attggtgtttggcgtccagatacttattttgcatctgtttcagaaacatttgaaaatgga
gtcgaagattatatcaacaaatgggaatctgagaacagacgaagttatatgcgcccagca
ctttcttctgatagattaaaggatttgttgtacttaaagtggcagcgatctctttgtgac
ccaggagaagctgtgggtcttcttgcagctcagagtattggggaaccttccacacagatg
actctgaacaccttccactttgctggcagaggtgaaatgaatgtcacactgggtattcca
aggttgcgggaaatattgatggtagccagtgcaaatattaaaacgccaacgatgagtgtt
cctgtgttcaataccaagaaggctctcaagaaggtgaaacagcttaagaaacagctcaca
agagtgtgcttagctgaggtcttgcagaaagttgagatagaggaatccctgcatgtgaaa
tgcaagcagaacaaacatcgtctctacaaaatcaaattccatttcttgccccatgcatat
taccgagaggagaagtgtgtgaagcccagggagatcttgcacttcatggaaacaaggttc
tttaaaatttgtctggaagcaattaaaaggaagaacgcaaaggtggcatcttttactgaa
gtcagcacccggaaggcaactcggaaagatttagatggtgaccgagacaagaataatcag
gaagctccagcagaggaagaagagaacattgttgaggcagaagctgatgaaggtgatggt
gatgctacagaagcaaaacggaggaagaaccaagaagaagaggtcgattatgagagtgaa
gaagagaatggggaagaaaacgttgatgagaatctagaagatgaagaggctgaatcggaa
aaagaagaaaggactcccagtgcagaagatcagattgaagcagatggtgatgaatctcaa
catctttcctttatgtctcagactaaaaaagaaaaagatcgattgcttcagtcagcagag
gtgcgagtaaacgctgttctggacagccacccatcaatacaggattacacgtttgacact
gaaaatgaactttggtgtgaggtttcattgacgcttccattgatgaaggtgtacttcgat
ctctcctccttgcttgtctctcttgcacgaagcacagtcattcatgaagtgaaggggatc
acacgatgcttgttgaatgaaagtaccaataagcaaggagagaaggaactcattctgcat
accgaagggataaaccttgcggagctgttcagatactctgatattttggacctgaacaga
ctttattccaatgatattcatgccatggctaagaattatggaattgagtctgccctgagg
gtgattataaaggaaataaaagatgtatttgctgtatatggaattgtggtagaccctcgg
cacctttcacttgtggcagattacatgtgttttgaaggattttataaaccgctgaatcgt
tttggaattcagtccaactcctcccctctgcaacagatgacatttgaaaccagctacaaa
ttcttgaaggaagcaacaatgatgggtgcccatgatgaactgcgatccccttctgcatgc
ctagtggttggaaaagttgttaaaggagggactggtttgtttgacctcaagcaacccctc
acatag
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integrated database retrieval system
