Pygoscelis adeliae (Adelie penguin): 103924849
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Entry
103924849 CDS
T06012
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103924849 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
padl03041
]
103924849 (PRPF8)
Spliceosome [BR:
padl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103924849 (PRPF8)
Complex C
U5 SnRNP specific factors
103924849 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
103924849
NCBI-ProteinID:
XP_009331729
UniProt:
A0A093NAB0
LinkDB
All DBs
Position
Unknown
AA seq
2334 aa
AA seq
DB search
AAVSPSRGGCAPVPSPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKEDM
PPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYH
ITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADN
ILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYRL
ANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINK
IIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISH
RHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRA
LDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKF
FQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFG
NAFHLCREVLRLTKLVVDSHVQYRLGNVEAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQ
IRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFE
GRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWK
ANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTR
LYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLIL
ALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDL
YSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINN
LQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKD
MNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEV
AHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMR
LMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCR
TSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVN
KWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKE
LGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFID
SQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTD
FKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGL
FWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIF
MHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYK
MNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYAR
AKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALY
VLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTK
PINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQI
IVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYD
DWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEV
QLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTA
TQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETG
YTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPG
QLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTPG
SCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNY
NFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
gccgccgtctccccgtcccgcggcggctgcgccccggtgcccagtccgctggcgccgctg
cccgactacatgtctgaggagaagctgcaggagaaagcccgcaagtggcagcagctgcag
gccaagcgctatgcggagaagaggaaattcggcttcgtggacgcgcagaaggaggacatg
ccccccgagcacgtccggaagatcatccgcgaccacggcgacatgaccaacaggaagttc
cgtcacgacaagcgcgtctacctgggcgctctgaagtacatgcctcatgctgttctgaag
ctcttggagaacatgcccatgccctgggagcaaatcagagatgttccggtgttgtaccat
atcacaggcgccatctcttttgtgaatgagattccctgggtcatagagccggtgtacatt
gctcagtgggggtcgatgtggattatgatgaggcgagagaagagggataggcgtcacttc
aagaggatgagattccccccgtttgacgatgaagaaccccctctggattatgctgataac
atcctggatgtggagcccctggaagcaattcagcttgagctggatccagaggaggatgcc
cctgtgctggactggttctatgaccaccagccgctgaaagacaacaggaagtatgtaaat
ggttcaacgtaccagcgttggcagttcactctccccatgatgtccacgctgtaccggctg
gccaatcagctgctcactgaccttgtggatgacaattatttctatttgtttgacctgaaa
gcgttctttacctccaaggcgctgaacatggctattcctggaggtcccaagttcgagcct
cttgttagagacatcaatcttcaggatgaagactggaatgaatttaatgacatcaacaaa
attatcatcaggcagccgatcaggacagagtacaaaatcgctttcccgtacctgtacaat
aacctgccacaccatgtccacctgacctggtatcatactccaaacgtcgttttcattaaa
acagaagatcctgatctcccagctttttacttcgatccactgatcaaccccatttcacac
agacattccgtcaagagtcaggaaccgttgcctgatgatgatgaagagtttgagttgcca
gagtttgtggaacctttcctgaaggataccccactctacacagataacacagccaacggc
attgccctgctgtgggccccacggcccttcaacctgaggtctgggaggactcggagagct
cttgatatcccactggtcaagaactggtatcgtgagcactgcccagcaggccagcccgtg
aaagtgcgagtctcctatcagaagctactgaaatactatgttctgaatgcgctcaagcac
agacctcccaaggcccagaagaagaggtacctgttccgctccttcaaggctacgaagttt
ttccagtcgacgaagctggactgggtggaagtaggcctgcaggtgtgtcgccagggctac
aatatgctgaacttgctgatccacagaaagaacctgaactaccttcacttggattataac
ttcaacctgaagcctgtgaagaccctcaccactaaggaaaggaaaaaatctcgttttggt
aatgctttccatctgtgccgagaggttctacggctgactaagttggtggtggacagccat
gtccaatacagacttggaaatgtggaagcgtttcagttggcagatggcttgcagtacatc
tttgcccatgtgggtcagctgacaggaatgtaccgatacaagtacaaactgatgaggcag
attcgtatgtgcaaggacctgaaacatctcatctactacaggtttaacacagggcctgtg
ggcaaaggtcctggctgtggcttctgggctccaggctggagagtatggctgttcttcatg
aggggcatcacgccgctgctggaacgctggctggggaatctgctggccaggcagtttgaa
ggccgtcactcaaagggtgtagcaaagactgtcacgaagcagcgtgtggagtctcacttt
gacctggagctgagggcagccgttatgcatgacattctggacatgatgccagaaggaatc
aaacagaacaaagccagaaccatcctgcagcatctgagcgaggcttggcggtgctggaag
gccaatatcccctggaaggtgccagggctgccaactcctattgagaacatgatcctgagg
tacgtgaaggcaaaagctgactggtggacaaatacagctcactacaacagggagcggatc
cgtcggggtgcaactgtagacaaaaccgtctgtaagaagaatctgggccggctgaccaga
ctctacttaaaggctgagcaggaacggcagcataattacttgaaggatgggccttacatc
acagcggaagaggctgttgctgtgtatacaaccacagtgcactggctggaaagcaggagg
ttctcacccattcctttccccccgctgtcctacaagcatgacaccaagttgctcatatta
gccctggagaggctgaaggaagcttacagtgtgaaatctcgcctgaatcagtcgcagaga
gaggagttgggcttgattgaacaggcttacgataatcctcacgaagctctgtccagaatc
aaacgacaccttttgactcagagagccttcaaggaggtgggtattgagttcatggatctc
tacagccacttagttcctgtttatgatgttgagcccttggagaaaatcacagatgcttat
ctggatcagtacttgtggtacgaggctgataagcgacgacttttccctccatggatcaaa
cctgctgacactgaacctcctccactgttggtgtacaagtggtgccaaggcattaataat
ctgcaagatgtttgggaaacaagtgaaggtgaatgcaatgtgatgctggagtctcgattt
gagaagatgtatgagaagattgacctgacattgctcaacaggctgttgcgtcttattgtt
gatcacaacattgctgactacatgacagccaagaacaacgtggtgatcaactacaaggac
atgaatcacacgaactcctatgggattattcgtgggctgcagtttgcttcctttattgtc
cagtattatgggcttgtgatggacctgctggtgctgggtctgcaccgtgccagtgaaatg
gccgggcctccccagatgccaaatgacttcctcagcttccaagacattgccactgaggtg
gcccatcccatacgcctcttctgcagatacatcgaccgtattcacatcttcttcaggttt
acagcagatgaggcaagagacttgattcagcggtacctgacggagcatccagatcccaac
aatgagaacattgtaggctacaacaacaagaagtgctggcccagggatgctcggatgcgc
ctcatgaaacatgacgtgaaccttggtcgtgctgtattctgggatatcaagaaccgcttg
cctcgatcagtcaccacggtgcagtgggagaatagctttgtatccgtttacagcaaggat
aaccccaatttgctgtttaacatgtgtggttttgagtgccgcatcttgcccaagtgccgc
accagctatgaggaattcacccacaaggatggtgtctggaacttgcagaatgaggtcacc
aaggagcgcacagctcagtgcttcctgcgtgtggatgatgagtccatgcagagatttcac
aacagagtgaggcagatcctcatggcatctggctccacgaccttcactaagattgtcaat
aaatggaatacagctctgattggcttgatgacatatttccgggaagctgttgtaaatact
caggagttgcttgatttgctggtgaagtgtgaaaataaaatccagactcgaatcaaaatt
ggtctgaattccaaaatgcccagccgttttccgccggtggtgttttacacccctaaagag
ctgggagggctgggcatgctctccatgggccacgttctcatcccgcagtctgacctgagg
tggtccaagcagacagatgttggcatcactcacttccgctcaggaatgagtcatgaggag
gaccagctaatcccaaatttgtatcgttacatccagccttgggaaagtgaattcattgac
tctcagagagtgtgggcagagtatgccctcaagcgacaagaggctatagcccagaacagg
cgtctgacgctggaggatctggaggactcatgggacaggggaattcctcgtattaacacc
cttttccagaaggaccggcataccctagcttatgataaagggtggagagtcaggaccgac
ttcaaacagtatcaggtcctgaaacagaacccattctggtggacacatcagcgccatgat
ggcaaactctggaacctgaacaactaccgcacggatatgatccaggcgcttggtggagtg
gaaggaatcctggagcacactctcttcaagggcacttacttccccacgtgggagggtctc
ttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaatgcc
cagagatcgggtttgaaccaaattccaaacagaagattcaccctgtggtggtctcctacc
attaacagagccaacgtatatgttgggtttcaggtgcagctggatttgacaggcatcttt
atgcacggcaagatccccacgctgaagatttctctcattcagattttccgagctcacttg
tggcaaaagatccatgagagcattgtaatggatttgtgccaggtgtttgatcaagagctg
gatgctctggagattgagacagtgcagaaagagacgatccatcccaggaagtcatacaag
atgaattcctcatgtgcagatatccttctctttgcttcctataagtggaacgtgtcacgt
ccatcattgctcgcagattccaaagatgtgatggacagcaccaccactcagaagtattgg
atagatatccagctgcgctggggagattacgattcccatgacatcgagcgctatgcaaga
gccaagttcctggactacactacagacaacatgagtatctatccatctcctactggtgtg
ctcattgccattgatctggcctataacttgcacagtgcttatgggaactggttccctggg
agcaaacctctgatccagcaggctatggccaaaattatgaaagcaaatcctgcgctgtat
gtgttgagagaacgaatccgcaaggggttgcagctgtactcatctgagcccacagaaccg
tacctttcctcccagaactatggagagctcttctccaaccagatcatctggtttgtggat
gacaccaatgtgtacagagtgaccattcacaagacttttgaagggaatttgaccacaaaa
cccatcaatggagccattttcatcttcaatcccagaactggacagctcttcctgaagatc
atccatacgtctgtgtgggcaggacagaagcgtctagggcagctggccaagtggaagact
gctgaagaagtggctgccttgattcgatcacttcctgtggaggagcagcctaagcagatc
atagtgacccggaagggcatgttggacccacttgaggtgcacttgctggatttccccaat
attgtgatcaaaggctcagagttgcagctgcccttccaggcctgtctgaaagtggaaaag
tttggcgatctcatcctgaaggctaccgaaccccagatggttctcttcaatctctatgat
gactggctgaagaccatctcttcctacacggcattctctcgtctgattctgattctccga
gcactacatgtgaataacgatcgagccaaagttattttgaaaccagataagacaaccata
acggagcctcaccacatctggccaaccctgacagatgaggagtggatcaaggtagaggtg
cagctgaaggatctcatccttgctgactatggcaagaagaacaatgtgaacgtggcatcc
ctgacacagtcagagatccgagacattatcctgggcatggagatctctgccccctctcag
cagagacagcagattgcagaaattgagaagcaaaccaaggagcagtcgcaactgacagcc
acgcagacccgcactgttaacaaacacggggatgaaatcatcacctctacaaccagcaac
tacgaaacccagactttctcctccaagaccgagtggcgcgtcagagcaatttctgctgcc
aacctccacctgcgaacaaaccacatttatgtttcatcagacgatataaaggaaacgggc
tatacgtacattcttcccaagaacgtgttgaagaaattcatctgcatctcagatctgcgg
gctcagattgcaggttacctgtatggagtgagccctcccgataacccccaagtgaaggag
atccggtgcattgtaatggtgccccagtggggaacacaccagactgtgcatctcccgggg
cagctgccgcagcacgaatatctcaaggaaatggaacctctggggtggattcacacccaa
ccaaacgagtcccctcagctctcgccgcaggatgtcaccacccatgccaaggtcatggct
gacaacccttcctgggatggggagaagactatcatcatcacctgcagtttcacgccaggc
tcctgcacgctgacagcctacaaactgaccccgagcggctacgagtggggcaggcagaac
acggacaaagggaacaaccccaagggctacctgccgtcccattacgagagggtgcagatg
ctcctgtcggatcgcttcctcggcttcttcatggtcccagcgcaagggtcctggaactac
aacttcatgggtgttcgccacgaccccaacatgaagtacgagctgcagctcgccaacccc
aaggagttttaccacgaggtccatcgcccttctcacttcctgaacttcgccctgctgcag
gagggggaggtctactccgccgaccgggaggacctctacgcctag
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integrated database retrieval system
