Pygoscelis adeliae (Adelie penguin): 103925036
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Entry
103925036 CDS
T06012
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103925036 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
padl03400
]
103925036 (MSH2)
DNA repair and recombination proteins [BR:
padl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103925036 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
103925036
NCBI-ProteinID:
XP_009331955
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All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MACRRTQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDWYLAYKGSPG
NLAQFEEVLFANNDMSTAIGVVGVKLSTADGQRVVGVGYVDTTLRKLSVCEFPDNDQFSN
LEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLK
SKKEEQMNSAALPEMEKQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAA
VQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAF
VVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNVVQALERHEG
AHQMLLLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKMN
ELEEKMQSFLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKYGIVDTQK
NGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIV
SFAHVSNGAPVPYVRPVILEKGQGRIVLEGARHPCIEMQDEVAFIPNDVTFEKGKQMFHI
ITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFM
AEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATHFHE
LTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESARE
KALELEEFQNIGKSKESEGEPPAKKFYREREEGEKIIQDFLCQVKALPLTGMSEEDIKIK
LKQLRNDVLAKNNSFVNEIISRTKVTS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcagaagaactcagaagcttgagagtgttgtgcttagtaaaatgaactttgaa
tctttcgtgagagatctgcttctggttcgtcattacagagttgaagtttacaagaacaaa
gcagggagtaaatctatcaaagaaaatgactggtatttagcatacaagggttctccagga
aatcttgcccagtttgaggaagttctctttgccaacaatgatatgtcaacggccattggg
gttgtgggggttaagctgtctactgctgacggacaaagagtagtaggagtggggtatgtc
gacactacgctgagaaaattgagtgtctgtgagtttccagataatgaccagttctcaaac
cttgaagctctgctggttcaactaggcccgaaggaatgtgtgctaccaggaggagagact
gcaggcgagatgggaaaactacgacaagtcattcagaggggaggaatcctgattacagac
aggaagaaggcggattttacaacaaaagatattgttcaggatctcaatcgcttgttaaaa
tcaaaaaaagaagaacaaatgaatagtgcggcattgccagagatggaaaagcaggttgct
gtttcgtctttgtcggccattatcaagtttttagagttgctgtcagatgagtctaatttt
ggacaatttgaactgactacttttgatcttagtcaatatatggttctagataatgcagct
gttcaagccctcaacctttttcagagttctgtggaaaatgctaacactgcacagtctcta
gctggtttactaaataaatgcagaacccctcaaggacaaagactagttaatcagtggatc
aaacaaccgcttatggacaagaatagaattgaagaaaggttgaatttggttgaagctttt
gtggtggatccagaactacgtcagtgccttcaggaagatctcttacgtcgcttcccagat
cttaaccgactggcaaagaaatttcagagacaagcagcaaacttacaggactgttaccga
atgtatcaggctattaatcaactgcctaatgttgtacaagcactggaaagacacgaagga
gctcaccagatgttgttgttggcagtgtttataacacctcttaatgatatctattctgac
ttctcaaagtttctggagatgatagaaacaacattggacatggataaggtggagaatcat
gaatttcttgtcaaggcttcttttgatcctaatttgacagaattaagagagaagatgaat
gaactggaagaaaaaatgcaatcctttttaaagagtgcagccaaagaactaggtttggaa
gctggcaaaagtatcaaactggagacaaattcacagttcggacatcactttcgaataact
tgcaaggaggaaaaagttctccgtaacaattcaaaatatggaatagttgatacacagaag
aatggtgtgaaatttactaacagcaaactgagctccgtcaatgacgaatatataaagaac
agagaagagtatgaagaggctcaggatgcaattgttaaggaaatcattaacattgcttca
ggttatgcagaaccaatacagacgatgaatgatgtgatagctcaattagatgcaattgtc
agttttgctcatgtgtcaaacggagcaccagtgccctacgtccgtcctgtcattctggaa
aagggacaaggaaggattgtgctggaaggtgccaggcatccttgcatcgaaatgcaagat
gaggtggccttcatccccaatgacgttacatttgagaagggcaagcagatgttccacatt
attactggccctaacatgggaggaaaatcaacctacatccgacagacaggggtgattgtt
ctgatggcccaaattgggtgttttgtaccatgcgactctgcagaaataaccattgtggat
tgcatcctggctcgggtgggagccggagacagtcagctgaaaggcgtgtctactttcatg
gctgaaatgttagaaactgcttcaatccttaggacagcatctgaaaactccctgataatc
attgatgagctgggaagaggaacttctacctacgatggctttggcttagcatgggctatt
tcagaatacattgctagcaaaatctgtgctttctgtatgtttgctacacattttcatgaa
ctgacagctcttgctgatcaagtgccaacagtaaataacctacatgttactgctctgacc
agtgatgacacactgacgatgctttatcgtgtcaaggaaggtgtttgtgaccagagtttt
ggaatacacgtagcagagttggcggctttcccaaaacatgtgatagaaagtgcaagagag
aaagcattggagctggaggagtttcaaaacattggcaagtccaaggaatctgaaggagaa
ccaccagccaagaaattctacagagaaagagaggaaggtgaaaagataattcaggatttt
ctttgtcaagtgaaagcattgccactgacaggtatgtcagaagaagacatcaaaatcaag
ctgaaacagctgagaaacgatgtgttggcaaagaacaacagttttgtgaatgaaatcatt
tcccgaacaaaagttacatcatga
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