KEGG   Pygoscelis adeliae (Adelie penguin): 103925318
Entry
103925318         CDS       T06012                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
padl  Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:padl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:padl04121]
    103925318 (HLTF)
   03400 DNA repair and recombination proteins [BR:padl03400]
    103925318 (HLTF)
Enzymes [BR:padl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103925318 (HLTF)
Ubiquitin system [BR:padl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103925318 (HLTF)
DNA repair and recombination proteins [BR:padl03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    103925318 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-RING_2 ResIII DEAD zf-ANAPC11 RING_XB3-XBAT31 zf-C3HC4_4 zf-rbx1 zf-Nse Prok-RING_4 HDA2-3 zf-RING_6 zf-RING_4
Other DBs
NCBI-GeneID: 103925318
NCBI-ProteinID: XP_009332289
LinkDB
Position
Unknown
AA seq 1001 aa
MATIDEFTHRYFNDSQQRTISADSARGCSQYNICRGERNYSRFSSSDFYSSLGLEDFLSV
GDTSGTEEDTDSAILYGTLRGSVVGLRYYTGIVNNNEMVALQREPNNPYDKNAVKVNNVN
GDQVGHIKKELAAALAGIMDNKLALVEGVVPYGAKNAFTMPVQMSFWGKEENKEAVLDQL
KRHGFKLAPPLKVGSEYGFGSKWISGRAGPSYSAPVHAAVQLTTEQLKSEFDKLFEDLKE
DDKTCEMEGAEAVGTPLLPHQKQALAWMVSCENSNDLPPFWEERSNFYYNTLTNFAEKQR
PKNVLGGILADDMGLGKTLTTIALILTNFQDGKPLPVEKITSDKFYEESGTNSKNNVGRR
LCKDSSNVMEPGGSNVKKFETTPLKYSSCPPKRDKAKKPRYSGSSDLGESEEWLLQQTET
TSCVIQEDTGFASVLLPSSTCLKRQTKRKGVTSVQSVEKKYSDGDPRATLIVCPLSVLSN
WIDQFEQHIHQDFHVNIYVYYGSDRNKDPSVLSEQDIVLTTYNILATDYGIRGDSPLHKV
KWLRIVLDEGHTIRNPNAQQTKAALNLEGHRRWVLTGTPIQNSVKDLWCLISFLKLKPFT
DREWWHRTIQRPVTMGAPGGLGRLQSLIRSITLRRTKTSKVKGKPILELPERKVLIQHVT
LTEEERQIYQSVKKEGKAAISRFFSEGTVLTHYADILGVLLRLRQLCCHPHLCINTSSSS
FSADNKTPEELHETLVSKMKLVLSSGSDEECAVCLESLTLPVITRCAHVFCKPCIFEVIR
SEQPNAKCPLCRNELRVEHLVECPLEGEIDSSNGRKSDQEWISSSKIDALMHALIELRRD
NPTAKCLVVSQFTTFLSLIEYPLKESGFAFTRLDGSMAQKKRVEAIQCFQSSQAGSPTVM
LLSLKAGGVGLNLTAASRVFLMDPAWNPAAEDQCFDRCHRLGQKHNVVITKFIVKDSVEE
NMLKIQNKKRELAAGAFATKKPSASEVNQTKINEIKALIDL
NT seq 3006 nt   +upstreamnt  +downstreamnt
atggcaacaattgatgagttcacacatagatacttcaacgattctcaacaacgtactatt
tctgcagattctgcaagaggatgctctcaatataacatctgtagaggagaaagaaactat
tcccgtttttcctcttctgacttttactctagtcttgggttggaagacttcctctctgta
ggtgacacttctggaacggaggaggatacagactcagctatcttatatggcactttgcga
ggaagtgttgttggattacgatactacacagggattgttaataacaatgagatggttgca
cttcagagagagcccaataatccttatgataaaaatgcagtgaaagtaaataatgtgaat
ggagaccaggtaggccatataaaaaaagaactagcggcagcattggcaggcattatggac
aacaaactagcattagttgaaggggttgtcccttatggagcaaaaaatgcctttactatg
cctgtacaaatgagcttttggggaaaagaagaaaacaaggaagcagtgctagatcagcta
aaaaggcatggattcaaattggctcctcctctgaaagtaggttcagaatatggttttgga
tcaaagtggatttctgggagagctggtccaagttatagtgctccagttcatgctgctgtg
cagttgaccactgaacagcttaaaagtgaatttgacaaattgtttgaggatctgaaggaa
gatgataaaacttgtgaaatggaaggagcagaggctgttggcacacccttgcttccccat
cagaagcaggctttagcttggatggtttcatgtgagaacagtaatgatttgccaccgttt
tgggaagagagaagtaacttctattacaatacacttacaaacttcgcagaaaagcagcga
cctaaaaatgttcttggaggaatactggctgatgatatgggactgggtaaaacacttact
actattgcattgattctcacaaattttcaagatggcaagcctcttcctgttgaaaagatc
acaagtgataagttttatgaggaatctggtactaacagcaagaacaacgttggacgcaga
ctatgtaaagactctagcaatgtgatggagcctggtggttctaacgtaaaaaagtttgaa
actactccgttgaaatactcaagttgtcctccaaaaagagataaagccaagaaacccaga
tattcaggaagcagtgacttgggagagtctgaagaatggctactgcaacaaacagagaca
acttcctgtgttatccaagaagatactggctttgcatctgttcttctaccttcatctact
tgtttaaaaagacaaacaaagagaaaaggtgtcactagcgttcagtcagttgagaagaaa
tattctgatggtgaccccagagcaacactgattgtatgtccactgtctgtcctaagcaac
tggattgaccagtttgaacaacatatccaccaagattttcatgtaaatatttatgtttat
tatggttctgaccgtaacaaggacccatcagttctttcagaacaagacatcgtactgaca
acatacaacatcttagctactgattacggaatcagaggtgacagccctttacacaaagtc
aagtggctgagaattgtgttggatgaggggcacactatacgaaatccaaatgctcagcaa
actaaagctgccttaaatctggagggacacagaagatgggtacttacaggcactcctatt
cagaattctgtaaaggatttgtggtgtcttatttccttcttaaaactgaaacctttcact
gatcgagagtggtggcacagaacgattcaacgtccagtcacaatgggagctccaggagga
cttgggcgtttacagtctctgattaggagtatcacccttagaagaactaaaacaagtaaa
gttaaaggaaaacccattttggagttaccagaacgtaaagtacttattcagcatgttacg
cttacagaggaagagaggcaaatctatcagtctgtgaagaaggagggcaaagctgctatt
agcagatttttcagtgaagggactgtactaactcactatgctgacatccttggtgtcctg
ctcagattgaggcagctttgttgtcatcctcatctttgtataaatacatcttcttctagt
ttttcagctgataataaaactcctgaagaactgcatgagacattagtgagtaaaatgaag
ttggttctgagctctggttcagatgaagaatgtgcagtttgcttggaatcactgactctt
cctgtgataacacgctgtgcgcatgtgttttgtaagccatgtatttttgaagtcatcaga
agtgaacagccaaatgccaaatgccctctctgtaggaatgagcttcgagtagagcacttg
gtggaatgtcccctagaaggggaaatagactccagtaatggaaggaagtctgatcaggag
tggatatccagttcaaagatagatgctctcatgcatgctttgatagaactacggagggat
aatccaactgctaaatgtctggttgtttctcagttcacaacttttctgtcactgatagaa
tatcccttgaaagaatcagggtttgcctttactcgtttggatgggtcaatggcacagaag
aaaagagtagaagcaattcagtgtttccaaagcagccaagcaggatccccaactgtaatg
cttttgtcgctgaaagcaggtggagttggattaaatctgacagcagcttcccgagtgttt
ttaatggatcctgcttggaatcctgctgcagaagaccagtgttttgacaggtgtcacagg
ctgggtcagaagcataatgttgttattactaagttcattgtgaaggattcagtggaagaa
aatatgctgaaaattcagaacaagaagagggaacttgcagcaggagcctttgctaccaaa
aagccttcagcaagtgaagtaaaccaaacaaaaattaatgaaattaaggctttaattgat
ttatag

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