Pygoscelis adeliae (Adelie penguin): 103925565
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Entry
103925565 CDS
T06012
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
padl03021
]
103925565 (SCAF8)
03041 Spliceosome [BR:
padl03041
]
103925565 (SCAF8)
Transcription machinery [BR:
padl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103925565 (SCAF8)
Spliceosome [BR:
padl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103925565 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103925565
NCBI-ProteinID:
XP_009332568
LinkDB
All DBs
Position
Unknown
AA seq
1331 aa
AA seq
DB search
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA
PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAGGIPPPVVTP
VLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWVSQIANTDTLAAVAQILQSPQGQQLQ
QLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLM
DRFDFGEESEQNEEPKKETPASQLPLVPESMNNSLFHQLAEQLQQQNLEHLRQQLLEQQQ
PQKASPEENQEGNFGSEHSASPSQGSSQQQFLEVETNVDDSMDIQQQDMDIDEGQDVAEE
EIFEQEEKKTAVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSR
SYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIE
SINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWDV
DLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEWETARSSEAAKENIQTTQSAAVDKST
VITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGYSAIPPPPFLRASFNP
SQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPLVQPPLPIAQETMKDVPFTSLVLPVGT
VTSNLATPTLSAGSVFNPLPINKPESDEKGSHLPDLQISSSENNRSVQSDVSSSSGLGGV
QPPSVSSSSGLTGEGQPPSVSSSSGLAGGVQPPSVSSSSGLAGGVQPPTVSSSSGLAGGV
QLPTVSSSSSLAGGVQPASVSSSSGLMAGVQPPNVSSSSGLLAGVHPPSVSSSPGLLTGM
QPPNVSSSSGVLAGVQPPSVSSNSGLLIMPPPNVSSSSGLMGVPPPNISSSSGLLAMQHP
AGVQNMPHLNISSQRMPGMPLIDIRPGLMPHSPGPRFPLMQPGMPPQRSIPPPAILDPSL
HPPPRGPFPPGDIFNQTERPFGTPGRQNIDSISNPEKRLPLGGDNXXXXXDRDYRFPPVE
NRDNLNRPSPVDVRDSVGRPPVDPRESIGRPPVDGREHFARPHVDMRENFGRPGIDNLGR
REHFGFNSDKHWGQRGDYDEREHHAFPIYGGPKGFHEDRERFRHVNYRFDSRSGPNWNRG
FEQDAHRDFDDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSNNWIPPPHPRVFEYFD
GATSQRKADNMPQVNGENTETESQPPTAQVQDDPELYEKLTSSVEINKEKSDTEADIESE
PVVESTETEGT
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatcaccaaggcagcaatcaaggctataaagttctacaagcacgttgtacag
agtgttgagaaattcattcaaaagtgcaaaccagaatacaaggtacctggtctatatgtc
attgactccattgtaagacagtcccggcatcagtttgggcaagaaaaggatgtatttgct
ccaagattcagcaataacatcatcagcactttccagaacttgtaccgttgtccaggggat
gacaagagtaaaattgttagagtgctaaatttatggcagaagaataatgtgttcaagagt
gaaattattcagcctctcttggatatggcaggaggaattcctcctccagttgtgacccct
gtcttgcccagcactacagctgctatgagcaacaatacaccaggaacacctgtgactcca
gttactccagccaatgtggtgcagagtttacctgatccttgggtatctcagattgctaat
acagatacccttgctgctgttgcacagattttacagagtcctcaaggccaacagcttcag
cagttgatacagacactgcagatacagcagcagaaaccccagccttcactacttcaagcc
ctggatgctggtcttgtcgttcagttacaggccctcacagcacaacttacagctgcagct
gcagctgctaacacacttaatccactggaacagagtgtctcttttaataagaagctgatg
gacaggtttgactttggggaagaatctgaacaaaatgaagagcctaaaaaggaaactcct
gcttcccaactgcctttagtaccagaatctatgaacaactcgctttttcaccaactagct
gaacagctacagcaacaaaatttagaacatctcagacaacagcttctggagcaacagcag
cctcaaaaggcaagccctgaggagaatcaagaaggaaattttggttcagagcactctgcc
tcaccatcacaggggagtagtcagcagcagtttttagaagtggaaacaaatgtagatgat
tcaatggatattcaacaacaggacatggatatagatgaaggacaggatgttgctgaagaa
gagatttttgaacaagaagaaaagaaaacagctgttcgttcaagatcaagaactcgttca
agatctcgttcaaggtcaccaagaaaacgaaggtctagatcacggtctggttctcgtaag
cgtaaacacagaaaacgttcacgctcaagatcaagagaaaggaagagaaagtcatctcgg
tcatattccagtgaaagaagggctagggaaagggaaaaagaacgtcagaaaaagggattg
ccgcctatacggtcaaaaacactaagtgtttgcagtactactctttgggtaggtcaagta
gacaagaaggctacacagcaagacttaactaacttgtttgaagaatttggacaaatagag
tctattaatatgattcccccaagaggttgtgcttatgtctgtatggttcatagacaagat
gcgtatcgtgctcttcagaaacttagttctgggtcctataaaattgggtctaaaattatt
aagattgcctgggctttgaataaaggtgtgaaaacagaatacaagcaattctgggatgtg
gatctgggagtttcatatattccttgggagaaagtaaaattggatgatttggagggcttt
gctgaaggtggcatgattgaccaggagacagtaaatacagaatgggaaacagccagaagc
tcagaagctgctaaagaaaatattcaaactacgcagagtgctgcagttgataagagtaca
gttattacaacacagacagaagcttacacgcaaccagtcactatgctgcagattccagta
gctccagctgtgcctgctgttagcttggttccacctgcatttcctgtcacaatgtctgtc
cctcctcctggttatagcgcaattcctcctccacccttcttgcgagcgagtttcaaccct
tcacagccacctccaggttatatgcctcccccagttccacctgtggtcccaccacctgtt
gtcccgccacctgttgtcccaccagttgttccaacacctttagtacagcctccgttacca
attgcacaagagacgatgaaggatgttccttttactagccttgttctaccagttggcaca
gttactagcaatctagctactccaacgttatctgctggaagcgtttttaatcctctgcca
atcaacaaaccagaatcagatgaaaagggatcacatcttccagaccttcagatttcttcc
agcgaaaacaatagatctgtgcaaagtgatgtctcgagtagttctggacttggaggagtg
cagccacccagcgtctcaagcagttctgggcttactggagaggggcaaccacccagtgtc
tcaagtagctctggacttgcagggggagtacagccacccagtgtttcaagcagctctgga
cttgcaggaggagtgcaaccaccaactgtttcaagcagttctggtcttgcaggaggagtg
cagctacctactgtctccagtagctcttctcttgctggcggagttcagccagccagcgtc
tcaagtagctctggacttatggctggagtgcaaccaccaaatgtctcgagtagctcaggg
cttctagctggagtgcatccacccagtgtctcaagcagccctggccttctgacaggaatg
cagccacccaatgtctcaagcagctcaggagttctggcaggagtacagccaccgagtgtc
tcaagcaactctgggcttctcataatgccaccacccaatgtttcaagtagttctggactt
atgggagtgccgccaccaaatatttcaagtagttctggacttctggcaatgcagcatcca
gctggggttcaaaacatgcctcatttaaatattagtagtcaaaggatgccgggaatgcct
ctcatagatatccgtccaggcctaatgccccattcgcctggaccaaggtttccattaatg
cagccgggaatgccaccgcagcgtagtattccccctccagcaatccttgatccatctctt
cacccgccacctcgaggtccttttcctccaggagatatttttaatcaaacagaaagacct
tttggaacaccaggaagacaaaacatcgatagcatttctaatccagagaaaagactacca
cttggaggtgataacnnnnnnnnnnnnngagacagagattatcgctttcctccagtggaa
aaccgagataatcttaacagaccatctccagtggatgtcagagattctgttggacgtcca
cccgttgatccaagagagagtataggaaggcctccagtagatggaagagaacactttgca
agaccacatgtagacatgagagagaattttggaagaccgggtatagataaccttggtcga
agagagcattttggtttcaattcagacaagcactggggacagagaggagattatgatgaa
agagagcaccatgccttccctatttatggcggccctaaaggcttccatgaagacagagag
aggtttcggcatgtaaactataggtttgatagtagaagtggtcccaattggaatagagga
tttgaacaagatgctcatagagattttgatgaccgcagaagaccctgggaaagacagagg
gatagggatgacagagattttaatttttgcagagaaattaatgggaacaggtttggaaga
gacagaatgtcaaacaactggatcccccctccacatccacgggtttttgagtattttgat
ggggccacttcccaacgcaaagccgataatatgccccaggtaaacggtgaaaatacagag
acagaaagtcagccaccaactgcacaggtgcaggacgatccagaactttatgaaaaactg
acatcttccgtcgagataaacaaagagaagagtgacacagaagctgatatagaaagtgaa
ccagtggtagaaagcacagaaactgaggggacataa
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