Pygoscelis adeliae (Adelie penguin): 103926392
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Entry
103926392 CDS
T06012
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103926392 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
padl03041
]
103926392 (DHX38)
Enzymes [BR:
padl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103926392 (DHX38)
Spliceosome [BR:
padl03041
]
Complex C
Other components
Step II factors
103926392 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
PhoH
SRP54
Microtub_bd
AAA_16
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
103926392
NCBI-ProteinID:
XP_009333532
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
GREEGAAGGKRSRVSSYKDWEEGRDEVGSPEEDEEEEETDRSNRSARKDRHYRSVHVETP
SYTGGVSEEFWERSRQRERERREHGVFASSKEEKERKKERSRDRDHDRKRDREERDRSRY
SSRSERDGSSERSSRRSEPESPRHRPKDAATPSRSSWEEDDSGYSSAHRSQWESPSPMPS
CRDSERSHRASSLRDTDRRDRDRSVRSRYSDKTPLPTPSYKYNEWADDRRHLGATPRLSR
GRGRRADGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEEYVKKRE
QHLHKQRQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNL
VPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAG
TKLGDIMGIKKEEEKDEMVTEDGKVDYRTEQKFAEHMKEKSEASSEFAKKKSILEQRQYL
PIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMS
VAKRVSEEMGVRLGEEVGYAIRFEDCTSENTVIKYMTDGILLRESLREADLDNYSAIIMD
EAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVD
ILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPA
LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFN
PRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLA
NVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLD
PALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYL
NVYLQWKNNSYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKC
ICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQC
VTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQER
RNPLGSARSTKIYTPGRKEQGEPLTPRRTPARFGL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gggcgggaggaaggggcggccggtggaaagcggtcccgggtctcctcctacaaggactgg
gaagagggccgtgacgaggtgggcagtcccgaggaggacgaggaggaggaggagaccgac
cggagcaaccggagcgctcgcaaggacaggcattaccgttctgtccatgtggaaacacct
tcctacacagggggtgtcagtgaggagttttgggaacgcagccggcagcgggaaagggag
cgtcgggaacatggtgtctttgcctcctccaaggaggagaaggaacgaaagaaggaacgc
agtagggatcgggaccatgatcgtaaacgggaccgtgaggagcgggacagaagtcgttac
agcagcagatcagagagggatggctcatcagagcggagcagcaggaggagtgaaccggag
agtcccagacatcggcccaaagatgcagccacgccatctcgctccagctgggaggaagat
gatagtggctacagcagtgctcaccgctcacagtgggaatctccctcacccatgccttcc
tgtcgagactcagagcgcagccaccgggcatcatcgctgcgggacacagaccggagagac
cgggacaggtctgtgaggagcaggtactcggataagacgccattgcccaccccgtcgtac
aaatacaacgagtgggctgacgaccggaggcacctgggggccacgccacggctgtccaga
ggaagagggcggcgtgccgatggggaggagggcattgcctttgagacggaggaggagcgg
cagcagtgggaggacgaccagcggcaagctgaccgggactggtacatgatggatgaaggc
tatgacgaatttcacaaccccttggcctactcctctgaggagtacgtgaagaagcgggag
cagcacttgcacaagcagaggcagaagcgcatctcggcacagcggcggcagatcaatgag
gataatgagcgctgggagacaaatcgcatgctgaccagtggtgtggttcatcggattgaa
gtggatgaagattttgaggaggataactctgctaaagtgcatctgttggtgcacaaccta
gtgccccctttcctagatggaaggattgttttcaccaagcagccagagccagtcatccct
gtcaaggatgctacctcagatttggccatcatagcccggaaaggcagccaactggtgcgc
aagcacagggagcaaaaggagcgtaagagggctcagcataagcactgggagctggcaggc
acaaaactgggagacattatggggatcaagaaagaggaggagaaggatgagatggtgaca
gaagatggcaaagtggattacaggaccgagcagaagtttgccgaacacatgaaagaaaaa
agtgaagccagcagtgagtttgccaagaagaagtcaatcctggagcagagacaatatctg
cccatcttcgctgtgcagcaggagctgctctccatcctcagagacaacagcattgtgatt
gtggtgggggagacggggagtgggaagacgactcagctgacacagtacctccatgaggat
ggctacacagactatggcatgattggctgcacccagccccgcagagtggcagccatgtca
gttgccaagcgggtcagtgaagagatgggggtgcgtctgggagaggaggtgggctacgcc
atccgctttgaggactgcacatctgagaacacagtgatcaaatacatgacagatgggatc
cttcttcgtgagtcactgcgagaggctgacctggacaactacagtgctatcatcatggat
gaggcacatgagcgctcactcaatactgacgtgctctttggcctgcttcgggaggtggtg
gcccgacgctcagatctgaagcttgttgtcacttcggccaccatggatgcagataagttt
gcctccttctttgggaacgttcctattttccacattcctgggcgcactttccctgttgat
attcttttcagcaagaccccacaagaggattatgtggaggctgcagtgaaacaagccctg
caggtccatttgtctggtgctcctggagacatccttgtcttcatgcctggccaggaggac
atagaggtgacctcagaacaaattgtggagcaccttgaggagctggagaaggcgcctgct
cttgctgtactgcctatctattctcagctaccgtcggacttgcaggccaagatcttccag
aaggctccggatggggtcaggaagtgcattgttgccactaacattgcagagacctcactg
acagtggatggcatcatgtttgtgattgattctggctactgcaagttgaaggttttcaat
ccccgtataggcatggatgcgctgcagatttaccccatcagtcaagccaatgccaatcag
agggcaggccgagctggccgaacaggcccaggccactgcttcaggctctacacccagagt
gcctacaagaatgagctgctgacaaccacggtgccagagatccagcgcaccaaccttgcc
aatgtagtgcttttgctcaagtccctgggtgtgcaggacctgctgcagttccacttcatg
gatccgccccctgaggacaacatgctgaactccatgtaccagctctggattctgggtgcc
ctggataatacaggtggtctgacctcaacaggacgtctcatggtggagttcccactggat
cctgcactctccaaaatgctcattgtctcctgtgacatgggttgcagctctgagatcttg
ctcattgtctccatgttgtctgtgcctgccatcttttatcggcctaagggccgagaggag
gagagtgaccaagtgcgggagaaatttgctgttccagagagtgatcacttgacttacctg
aatgtttacctgcagtggaagaacaatagctattctacactgtggtgcaaccagcacttc
atccatgccaaggccatgcggaaggtgcgggaggtgcgtgcccagctcaaggacattatg
gtgcagcagcgaatgagcctagcatcctgtggtactgactgggatgttgtcaggaagtgc
atctgtgctgcgtatttccatcaagctgcaaagctgaagggcattggggagtatgtgaac
atccgtacaggcatgccctgccacctgcaccccacgagctctctgtttggcatgggctac
acaccagactacattgtgtatcatgagttggtcatgaccaccaaggaatacatgcagtgt
gtcactgctgtggatggagagtggctggcagaactgggccccatgttctacagtatcaaa
catgctggcaagtcacgccaggagaaccgccgccgtgccaaggaggaagtgtctgccatg
gaggaagagatggctttggctgaggagcagctgcgtgcccgccgggaggagcaggagcgc
cgtaacccactgggcagtgcaagatccactaaaatctacacccctgggcggaaggagcag
ggggagcccctgacgccacgacgcaccccagcccgctttggcctctaa
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integrated database retrieval system
