Pyxicephalus adspersus (African bullfrog): 140323441
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Entry
140323441 CDS
T11284
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140323441 (GEMIN5)
03041 Spliceosome [BR:
pads03041
]
140323441 (GEMIN5)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140323441 (GEMIN5)
mRNA cycle factors
P-body specific factors
140323441 (GEMIN5)
Spliceosome [BR:
pads03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
140323441 (GEMIN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_RIG_2nd
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_RIG_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_Aladin
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_LRRK2
NBCH_WD40
Beta-prop_SCAP
WD_LRWD1
TPR_IF140-IFT172
Fic_N
Motif
Other DBs
NCBI-GeneID:
140323441
NCBI-ProteinID:
XP_072256587
LinkDB
All DBs
Position
2:complement(38955380..38997455)
Genome browser
AA seq
1475 aa
AA seq
DB search
MGNPDRMLSASPNWYCSRSSDAAGGLFGFTARNSVYLMRINPQEPAFYGELVGHTERVSG
FAFSHYSGQSHICASSSDDGTVKVWDTNTKSIVTEHKLHRSTIVSLHWSPLVKDLLVTGD
EKGIVVCYWSNRNDGQQFFPEPRTIFCLSCSPHQEDLVAVGYKDGMIVLIDISRRGDVVH
RLRGHDDEIHCLAWCPHPREEELNQKLEDAPAAEQNTANGDLLPETENKGCYLASGSKDQ
TIRIWNSSTGKGVSTLKLPYLKRRGGSIDPATKERLWLTLHWPHGHPTQLLSSTFGGELL
LWDLTKSGKQKWSLLGASEGQNHTRIVFNLCSLVTEEGRELLISTSMDRDVKCWDLGSLS
CSWTLSSLGGFVYCLAFSPVAAGCLAIGVGDSMIRVWNTMSVVNSYDVKTLWQGIKSKVT
ALSWHPTKEGSLAFGTDDGKVGIYDVFSSKPPQISSTYHKKTVYSLCWGPPLPPFSFGAE
GDCSKFTLYSCGGEGIIFQHHPWKLSLEAQDINKLIQDTNDIKHKLPVHTELSWKPDLQH
IAIGNEDGSIEIFRAPNLQLICTIQQHHKLVNALRWHHDHSEDPNLSFLLASGSNNAMVY
VHNLKGPLENVSDAPITITEPYRTLCGHTAKITSLSWSPHHDARLASASYDGTSQIWDVL
QEEPLSNYRGHKGRLLCVQWSPVEADQVWTGADDFCLHSWLLSRQEHSRPPKGKKAADLE
KKRSLQPKIKTKKKKKIDSPKQEHGWDVVRGENDSPLPSAQNETSDQDEERGSNEIVTGD
KTMQQEVTATRESDTVTYMPPSIPTVEARSPSPTIKRVAVKKEHIKEKTDTRGRKKKSQS
LLPISTSKDHRSKEEQHRDCVKLAAAVCCKGADGSHALLEDSVHLGLYSDRATLHRLMEE
EGKAHLDSGHPDLQHHIMLWKGDLKGTLQLAAERGELTDQLVALSPMAGYWFWVWAVESY
VKQLCFQEQYTKAASHLLSINKVYEAVQLLKGNHLFREAIVVAKARLLSDDPILRELYTS
WAAVLEQDGHYAMAAKCYLGASSPYDAAKVLAKKGDLLSLSTASELALLAGEKDLAASFA
LRCAQEHVTVKNWVGAKQCLQPHSSLLGQRLLLCTSELLYSHTTEKTAIDWKTQATPCFH
EWASSGIEDTFITKLTGVWQKEYGVSTADQYSEAYQQLCSSETPPSTPNTIPKQLLLHIS
QEVALTTFNYLLKNWDEAASALLRSLSRCLQAGQFTLMQDTARLLLPNGCEELRSNLNPE
NKQSSSACDSLQAYLAYMKLYELWWSQNTDHTSQEIMMDTSAGIEEDVSVAGKDVHDKMS
DFEVLLSELHAGFQNAQREIADVQMALREMIQQHQRSRQIQDNSLELEQDPDTGSAQTPE
KCPDSGSQISAPSPVSLAELMKKLSAANHKLAEYPEYLKVLPFPDVLESCLVLLHFPSSM
LTSELKAQAIGLLQKHSSGSPDHNKAASKFLSLSS
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacccagaccggatgcttagtgcatccccaaactggtactgcagtcgttccagt
gatgcagccggtggcctctttgggttcactgctcgtaattctgtgtatttgatgcgtata
aacccccaggagcctgcattctatggggaactggttggacatacagagagagtgtctggc
tttgccttctcccactactctggtcaatctcacatctgtgccagcagctctgatgatggg
actgtgaaggtgtgggacactaacaccaagagcatcgtgactgagcacaaactccatcgg
agcacaattgtttccctgcattggtctccactggtgaaagacttgttggtgactggggat
gagaagggaatagtggtttgctattggagtaaccgtaatgatgggcagcagttctttcct
gagccaaggaccatcttctgcctttcctgctctccacaccaggaggatctagtggctgtt
gggtacaaggacggcatgattgttctcatagatatcagccgcagaggagatgtggtgcat
cgactgcgtggacacgatgatgagatccactgcctggcatggtgccctcatccccgagag
gaagaactgaatcaaaagctggaagatgcaccagcagctgaacagaacacagcaaacggc
gacctcctgccagagactgagaacaagggctgctacctggcctcaggcagcaaagatcag
actattcgtatatggaactcatccacaggaaaaggtgtttccacactgaagttgccctat
ttgaagcgccgtggaggtagtattgatccagccaccaaggagcgcctgtggcttactctc
cactggccacatggacatccaacacagttactgtccagtacttttggaggtgagctgctc
ttgtgggatctgacaaagtctggaaaacaaaaatggagtctcttgggcgcttcagaagga
caaaaccatactcgaattgtttttaatctgtgttcacttgtaacagaagaagggagggaa
ttacttatctctacatctatggaccgagatgtaaaatgttgggatctgggttccctttct
tgctcttggacattgagttccctgggtggctttgtgtactgcctggctttctcccctgtg
gctgctggatgcttggccatcggagtaggtgacagcatgatccgcgtatggaacactatg
tctgttgtaaactcctatgatgtgaagacgttgtggcaaggcatcaagtccaaagtcact
gcgctttcctggcatcccaccaaagaaggtagcctggcatttggtacagatgacggcaag
gttgggatttatgatgtgttctcctccaagcccccacagatctctagcacctaccacaag
aagactgtttattctttgtgctggggtccaccactgcccccattctcatttggagcagaa
ggggactgttccaaattcactctgtacagctgtgggggagaaggaatcatcttccagcac
catccctggaaactttcattggaggctcaggatattaacaagctgatccaagacaccaat
gacattaaacacaagttgcctgtacacactgaactgagctggaaacctgacttgcagcac
attgccattggcaatgaagatgggagtattgaaatcttccgggctccaaatcttcagctg
atctgcactatccaacaacatcataaactggtgaatgctcttcgctggcatcatgatcac
agtgaggacccaaacctaagttttctcttggcatcaggatccaacaatgctatggtttat
gtgcacaacctaaagggacctctggaaaacgtctctgatgcccccatcacaattacagag
ccttacagaaccctgtgtgggcacacagcaaagatcacaagtctgtcatggagcccgcat
catgatgccaggctggcatctgccagctatgatggtacatcacagatttgggatgttcta
caggaagaacctctcagtaattatcgtggacacaaggggaggcttctctgtgttcagtgg
tctccagtagaggcagaccaggtgtggacgggggctgatgacttctgtttacacagttgg
ctcttatccaggcaggagcacagccggccacccaaaggaaagaaagcagctgacctggaa
aagaaaagatcattgcagccaaaaatcaagacaaagaaaaaaaagaagatagatagtcct
aaacaggaacatggatgggatgtagttagaggagagaatgatagtcctctcccatcagca
caaaatgagacatctgatcaagatgaggaacggggttctaatgaaatcgtgactggagac
aagactatgcaacaggaagttacagccaccagagagtctgacactgtgacatatatgccg
ccatcaataccaacagtagaagcacgtagtccaagtccaaccataaaaagagtggctgtt
aagaaagaacacatcaaagaaaagacagatacacgagggagaaagaagaagtctcagtct
ctccttcctattagtaccagcaaagatcaccggtctaaggaagaacagcatcgggattgt
gtgaagctggcagcagcagtttgttgcaagggagctgatggatcccatgcattgctggaa
gattctgttcaccttggtctgtatagtgatagagctacactacatcgactcatggaggaa
gaaggaaaagcacatctggacagtggacaccctgaccttcagcaccatatcatgttgtgg
aaaggggacctaaagggaacattacaattagccgcagagcgaggcgaactcacggaccag
ctggtggcattgtctcccatggctggatactggttctgggtttgggcagttgaatcctat
gtaaagcagctgtgtttccaggaacaatacacaaaagctgcttctcacctgttgtccatt
aacaaagtatatgaggctgttcagcttctgaaaggaaaccatttgttcagggaagctatt
gttgtggctaaagcacgcctgctgtcagatgaccctattctccgtgaactatacaccagc
tgggctgcagttctggagcaggatggacactatgctatggctgctaagtgttacttgggg
gcatcctctccttatgatgcagctaaagtcctggccaaaaaaggggatctgctgtctctg
agtactgcttctgaactagccttactagcgggagagaaagacttggctgcctccttcgca
ctgcgttgtgcacaagaacatgtcactgtgaaaaactgggttggggccaagcagtgtcta
caacctcattcaagcctgctggggcagaggctgttactatgtactagtgaacttctgtat
agtcacactactgagaagactgcaatagattggaagacacaggccaccccatgttttcat
gaatgggctagcagtggcattgaggacacttttataactaagctcactggagtgtggcag
aaggagtatggagtgtctacagcagatcagtacagtgaggcctatcagcaactttgttca
tctgagactcctccaagcacccctaataccatccctaagcagctgctgctccacatctcc
caggaggtggcgctaaccaccttcaattacctcctaaagaattgggatgaagctgcatct
gccttacttcgcagcctctccagatgtcttcaagctggacagttcactttaatgcaagac
actgctcgactgttgcttccaaatggctgtgaggagctcagaagtaacctcaatccagaa
aataaacaaagctcttctgcttgtgacagtctgcaggcatacctagcatatatgaaactg
tatgagctatggtggagtcaaaacacagatcacacatctcaggagatcatgatggatacc
tctgctggaatagaggaggatgtctcagtagcaggaaaggacgttcatgacaaaatgtct
gatttcgaggtgctactttcagaactgcatgctggctttcagaatgcacagagagaaatt
gcagatgttcaaatggctctccgagagatgatacagcagcatcagaggagccggcagatt
caagataactctctggaattagaacaagaccctgacacaggctcagcccaaactccagag
aaatgtcctgacagcgggagccagatttctgccccaagtccagtctccctggctgagcta
atgaagaagctttctgctgcaaaccataagttggccgaatatccagagtatttaaaggtc
ttaccatttccagatgtactggagagctgcctggtgctacttcatttcccttcttcgatg
ctgacctccgagttaaaggcccaagcaataggactcctacagaaacacagttcggggtca
cctgatcacaataaagcagccagcaagttcctctcattatcatcataa
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integrated database retrieval system
