Pyxicephalus adspersus (African bullfrog): 140323621
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Entry
140323621 CDS
T11284
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03440
Homologous recombination
pads03450
Non-homologous end-joining
pads04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140323621 (RAD50)
03450 Non-homologous end-joining
140323621 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
140323621 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pads03032
]
140323621 (RAD50)
03400 DNA repair and recombination proteins [BR:
pads03400
]
140323621 (RAD50)
DNA replication proteins [BR:
pads03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
140323621 (RAD50)
DNA repair and recombination proteins [BR:
pads03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
140323621 (RAD50)
BRCA1-C complex
140323621 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
140323621 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_29
zf-met
AAA_15
AAA_13
AAA_16
Motif
Other DBs
NCBI-GeneID:
140323621
NCBI-ProteinID:
XP_072256953
LinkDB
All DBs
Position
2:61065386..61173098
Genome browser
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQVITFFTPLTILVGPNGAGKTTIIECLKYITTGDFPPG
SKGNTFVHDPKVANETDVRAQIRLQLRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
MKHGEKVSLSTKCAEMDREMISSLGVSTSVLNNVIFCHQEDSNWPLSEGRQLKIKFDEIF
SATRYIKALDTLRQVRQKQAQRVKECQAELKYLKQNKEKAHEIQNLLHSKEAQLAASREN
VKSIDNQLEPLKSRLLEIQKNLSKVMKLDNDIKALESRKKNMEKDNQDLEDKIEKIFQGT
DEELNEMYHNHQKTVREKERKLNDCQREMDRAVKDCQRLNREKGELLVQQGRLQMEADQH
QQLLRTRDSLMKTLAAQLELDGFEQTPFNSRQVASFQKLVKERQEKDEADANQIMKEFSE
KEAAKQKQIDEIRDKKTGLERTIELKSAMQNKKQGDLRNIKSELLQLERFSDRLQELNEE
LLKTEQELGSVEQHCNVEALRSEVEELQNQRVELDRTVRKLDQQMGQLNTHTTIRTQMDM
LKKDKAEKDDHIRKIKSRHNDELTSLLGHFPTKKQLEDWLYTKQKDINQTRDKLAKLNKE
LVSSEQNKNHISNELRKKEEQSGSYEEMLFNVCGSQDFDSDMTRLLEDIEKTSKQRAMLA
GATAVYTQFITQLTEENQPCCPVCQRTFPSEAELQDVINDMQSKLRLVPDKLKSTEGDLK
RREKRRDEMMALKPMRQMLIDHKEKEIPELRNNLVVINREIQRLKNEVEEQETLIATFLS
EEESAKACLQDISLMERYQVELRDVERKIAQHATKLQGVDLNRTVQQVNQEKQEKQLSLD
NVSGKIELLRKRIQDQQEQIQQLKSLANELRAEKLEISSNLQRRQQLEDQSVEMTTELQC
LSREIREARDQVFPLENTIEKLQQEKKEILQRKDSSYTARQEMLNDIKEKVKKTSLYVKD
IEKYITDGREEFKEQKETELQEILMRLNDCENHKEVINKDMMAIRQDIDTQKIQERCLQD
NLTLRKRVEELEKVKQEREQLLNEMGQMKAAQLRNEHQHLENKIETLKTNHSLALGRQKG
FEDEIMRFKKELREPQYKDAAEKHREMMIVMRTTELANKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADESVSATDKRRTYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR
NFQLVVITHDEDFVELLGRSEYVEHFYRIKKNMDQCSEIVKCGVSSLGSYMH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaattgagaaaatgagcatacttggtgtgcgaagctttggagtagaggataaa
gacaagcaagtcataactttcttcactccactgaccattttggtaggaccaaatggagca
gggaaaactactattattgagtgtcttaagtatatcacaactggtgattttccacctgga
tcgaaaggaaacacatttgtgcacgatcctaaggttgctaatgaaacagatgttcgagcc
cagattcgtcttcagctccgagatgtcaatggagaacttgtggctgttcagcggtctatg
gtgtgcacccaaaaggggaaaaaaactgaatttaaaacattggagggtgtgattacaaga
atgaagcatggagaaaaagttagccttagtacaaaatgtgcagaaatggacagagagatg
atcagttctttgggggtgtctacttccgtgctgaacaatgtcatcttctgccatcaagag
gattccaattggcctctaagtgaggggagacagctgaagataaagtttgatgagatcttt
tcagcaaccaggtatattaaagccttggatactttgcgtcaggtaaggcaaaagcaagcc
cagcgagtaaaagaatgccaagcagaactgaagtatttaaaacagaataaagagaaagca
catgaaatccaaaacctgcttcatagtaaagaggcccagttagcagcctccagagagaat
gtgaagtctattgacaatcagcttgagccactcaaaagtcgcttattggaaattcagaaa
aacctttctaaagtaatgaagttggacaatgatattaaagctttggaaagcaggaaaaag
aacatggaaaaggacaatcaggatttggaagataaaatagaaaagattttccaagggact
gatgaagagctcaatgaaatgtaccacaaccatcagaaaaccgtgagagaaaaggagaga
aagctcaatgattgccaacgcgaaatggaccgagcagtcaaggactgtcagaggctgaac
cgagaaaagggggaactgctggtccagcaaggtcgtctgcagatggaggctgaccagcac
cagcaacttctcagaacaagagactctcttatgaagaccttggcggcacagctggagctt
gatgggtttgagcaaacaccattcaattcaaggcaggtagcaagctttcagaaattggtg
aaagaaagacaagaaaaagatgaagcagatgcgaatcaaataatgaaagagttttcagaa
aaagaagcagcaaaacagaaacaaatagatgagattagagacaagaagacaggcctggag
agaactattgagctaaagtctgcaatgcagaacaagaaacagggggatctcaggaatatc
aaatctgagctgctgcaactggaacgtttctctgacagactgcaggaactcaatgaagaa
cttctaaaaacggaacaggaactagggagtgttgagcagcactgcaatgtggaagccctg
agatcagaggttgaggagctccagaaccagagggttgaactggacagaacagtgcgaaaa
ctggatcagcagatgggacagcttaatacccacacaacaatacgaacacagatggatatg
ctaaaaaaagataaggctgaaaaagatgatcatattcgaaagataaaatccagacacaac
gatgagttgacttctttactgggacatttcccaactaagaagcagcttgaagactggctt
tataccaagcagaaagatattaatcagacacgggacaagctggccaagttgaacaaggag
ctagtgtcatctgaacagaataaaaaccatataagcaatgagctgcgcaaaaaggaagaa
caaagtggatcttatgaagaaatgctcttcaatgtttgtggtagccaagactttgacagt
gatatgacacgactgctagaggacatagaaaagacatcaaaacagcgagcgatgctggca
ggagccacagctgtgtacactcagtttataacacagctaacagaggagaatcagccctgc
tgtccagtgtgccaaaggaccttcccctcagaggctgagctgcaagatgttattaatgat
atgcagtctaaattgcgactggtcccagataagctaaaatctacagaaggtgatttaaag
agaagagaaaaaaggagagatgaaatgatggcgctaaagccaatgaggcaaatgctaatt
gatcataaggaaaaagaaatccctgaactaagaaacaacctagtagtgataaatcgggaa
atacaacgtctaaagaatgaggtagaggagcaagaaactctaatagctacttttttatct
gaggaagagagtgctaaggcttgtctacaagacatatccctcatggagaggtaccaggtg
gagttaagagatgtggaacggaaaatagcacagcatgctactaaacttcagggggtggac
cttaatcgtactgttcagcaggtgaaccaggaaaaacaggagaagcagcttagcctggat
aatgtttcaggaaaaattgagctgctacgcaagcgcatacaagaccaacaagaacaaatt
caacaattgaagagtttagctaatgaactgcgagcagagaagcttgaaatttcaagtaat
cttcagcgtcgccagcaactagaggatcaaagtgtggagatgaccactgagctgcaatgt
ctctccagagagatacgagaagctcgagaccaagttttccccctggaaaacacaatagag
aaacttcagcaggagaagaaagaaatactacaaaggaaagactccagctacacagcaaga
caagaaatgctaaatgatattaaagaaaaagttaaaaagaccagcttgtatgtgaaagat
atagagaagtatatcactgacggaagggaagaattcaaagagcaaaaagaaactgagctt
caagaaatattaatgcgtcttaatgactgtgaaaatcataaagaagtgattaacaaagac
atgatggctattagacaggatattgatacccaaaaaatacaggaacgatgtctccaagac
aacctaacccttaggaagcgagtggaggagctagagaaagttaaacaggagagagagcag
ctattaaatgaaatggggcagatgaaagctgcacaactaaggaatgaacatcagcacttg
gaaaacaaaattgaaacattgaaaacaaaccacagccttgctcttggccgtcagaaagga
tttgaggatgaaatcatgcgcttcaaaaaagagctgcgagaaccccagtacaaagatgct
gcagagaaacacagggagatgatgattgttatgagaaccacagagctggcaaacaaagac
ctggacatttattataagacactcgaccaagccataatgaaatttcatagcatgaagatg
gaagagatcaataagatcattcgagatctttggcgcagcacctaccgaggacaagatata
gagtacattgagattagatctgatgctgatgaaagtgtctcagccactgacaaaagaaga
acatacaactacagagttgtgatgatcaaaggagatactgcactggatatgagaggacgg
tgcagtgctggacaaaaggttctggcatctcttattattcgcctggctctggcagagacc
ttttgtctgaactgtggaatactggcactcgacgaacctaccacaaacctggatcgtgaa
aatattgagtctctagcccatgctttggttgaaataatcaaaagtcgatcaagacagcga
aatttccagctggttgtcattacacatgatgaagattttgtagagcttctgggacgttca
gaatacgtggagcacttctaccgcattaaaaagaacatggaccaatgttctgaaattgtg
aagtgtggtgtgagctctttaggatcctatatgcattag
DBGET
integrated database retrieval system
