Pyxicephalus adspersus (African bullfrog): 140324080
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Entry
140324080 CDS
T11284
Symbol
LAMB1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04510
Focal adhesion
pads04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140324080 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140324080 (LAMB1)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
OVT1
BNR_6
Motif
Other DBs
NCBI-GeneID:
140324080
NCBI-ProteinID:
XP_072257739
LinkDB
All DBs
Position
2:102488123..102522126
Genome browser
AA seq
1824 aa
AA seq
DB search
MCSSTSSFFFLDLGKKKFHSHLRGTEGSTAHKKIKQIYPVCPQPRRTMVLFQVPGLFLVV
LFGIAHSQEPEFSHGCAEGSCYPATGDLLIGRSQQLSASSTCGLQKPESFCIVSHLQDEK
KCFICDSRTLYDAEDNTESHRIENVVTTFDPNRLNLWWQSENGVENVTIQLDLEAEFHFT
HLIMTFKTFRPAAMLIERSSDFGKTWNIYRYFAYDCESSFPGVSVGPMKKVDDVICDSRY
SDIEPSSEGEVIFRVLDPAFRIDDPYSPRIKSLLRITNLRIKFLKVHTLGDNLLDSRVEI
KEKYYYAIYDMVVRGNCFCYGHASECAPVSGYSDNVEGMVHGRCVCRHHTKGLNCEQCMD
FYHDLPWRPAEGRSSNACKKCNCNEHSTQCHFDMAVYMSTGNTSGGVCDDCQHNTMGRNC
EQCKPFFYQHPDKDIRDPNICQPCNCDPAGSQNGGICDRYSDFSVGLISGHCRCKSNVEG
ERCDRCKEGYYDLNAEEPDGCQPCGCNTLGTIPGGNSCDSVEGNCYCKRFVMGKQCDQCM
PGFWGLSNDLDGCRPCDCDRGGSLDNICSPESGQCRCRPHMIGRQCNEVESGFYFISLDH
YIYEAEDANFGPGVRTVERLHPQDRTPSWTGPGFAHVPEGGYLEFDINNIPISIEYDLLI
RYEPQLPEQWEEAVITVIRPGKIPTSSRCGNTIPSDDNQNVALPPGSRYIVLPRSICFEK
GLNYTIRLELPRYSVNSNVENPYTLVDSVSNYFLVVYXHLYTLGLIYXNSPNTGSDRQSX
ENLSDSAKLELTDVCKDFLFSISALLHEGGLECQCDPQGSLSAVCDPNGGQCDCRPNVVG
RNCDKCAPGTYGFGPSGCKPCECDLEGSAHSFCHPETGQCPCIHGAYGRQCDACLPGYWG
FPSCQQCQCNGHTDDCDVLTGECTGCRDHTEGYSCERCLNGYYGDPRLGSGDHCRPCPCP
DGPGSGRQFASGCYKDPTTEHVVCTCNKGYMGVRCDQCASGYYGNPEENGGVCQSCNCNS
NIDMSDPTACDKQSGVCLKCLHHTEGENCQHCQLGYYGSAIHQDCKKCVCNYLGTEQEHC
QGDVSCHCNRTTGQCPCLKNVVGQSCDHCAPNTWNLASGNGCEPCGCDAGRSLGPSCNEF
TGHCHCMPGFGGRNCSECQELFWGSPDIECRACDCDSRGIQTPQCDRSDGHCICNEGVEG
FRCDKCARGYSGIFPNCVPCHKCFALWDVIIKELSNRTNRLLDRASALKVTGVIGPYQKT
IDKVQETLKEIQTIISENPAVEPLKNIDQLFYEAEKLKSEVWEKVEEVEQKIAEINLNGS
IKLDALQADADSVSKALKELGEQLEYMKISNVRGAMDSINKYFQMSLEAEEKVNASAVNP
DSILEHSASTRREVEDLIDEKYIAFKEGQEEQSRLLDELAGEVQNLDLSLLSEKTCGTPI
GASCEVSQCGGLGCTTEDGKRKCGGDGCDGLVNIANGAWKTAMNFDKEILSAMAEVEELS
KLVAESKLKAEEAKQTAQSVLNKANATKEKVDKSNEDLRNLIKQIRDFLMQDGADLDSIE
AVASEVLKMEMPTTPEQLQALTEDIRERVESLSDVETILQQSAGDISRAESLLDEAKKSS
QSASDVKATADMVKEALEEAGRAQSAAEKAIKQADDDIKGTNDLLTSIESEAAVSEETLK
NATDRMNELEKNLEDLMKKSTSNSESLGSIEKSVEDVKADADEVKKVLDDELSNKYKEVE
DLIAKKAEDSSEARKKAEQLQKEAKALLTQANKKLNLLKDLEKSYEVNQRILEEKAKQLV
TLEETVRNLLQAISQKAAVYSTCL
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagctcaacttccagctttttttttttggatctgggaaaaaagaaattccacagt
catctaagaggcacagaaggaagcacagctcacaagaagatcaagcaaatttatcctgtg
tgtccccagccaaggaggacaatggtgctgttccaggtgccaggacttttcttagtggta
ctgtttgggattgcccattctcaagagccagagttcagccatggatgtgcagaaggcagc
tgttacccagccaccggtgacctgttaattggacgatcccagcaacttagcgcatcttct
acatgtggtctccagaaacctgaatcattctgcattgttagccatctacaggatgaaaag
aaatgcttcatatgtgactcacgaacactatatgatgctgaagataatacagaaagtcat
cgtattgaaaatgttgtcaccacatttgatccaaatcgtcttaatttatggtggcagtca
gaaaatggtgtggaaaatgtcacaatccagttggatcttgaagcagaattccatttcact
catctcatcatgacctttaagaccttccggccagctgcaatgttaatcgaaagatcttcg
gactttggtaaaacatggaacatctacagatattttgcatatgattgtgagtcttctttt
cccggagtgtctgttgggccaatgaaaaaagttgatgatgttatctgtgactcccgatac
tctgacattgaaccatccagtgagggagaggttatatttcgtgtcttggatccagctttc
cgtattgatgatccatacagtcctaggataaaaagcttgctaagaattacaaacctaaga
ataaaatttctgaaggtccacactttgggagataatcttttggattcaagggttgaaata
aaagaaaaatactactatgcaatttatgatatggttgttcgcggtaattgtttctgctat
ggacatgctagtgaatgtgcacctgtaagtggatattccgacaatgtggaaggaatggta
catggacgctgtgtttgtagacatcacacaaaaggtctgaactgtgaacagtgcatggac
ttttatcatgatttgccttggagaccagcagaaggtcgtagcagtaatgcttgtaaaaaa
tgcaactgtaatgagcattctacacaatgtcactttgacatggctgtatacatgtctact
ggaaatactagtggcggagtgtgtgatgattgccagcataacacaatgggacggaactgt
gagcaatgcaaaccattcttttatcagcatccagacaaagacatacgtgacccaaacatc
tgtcaaccttgtaattgtgacccagctggttcccaaaacggtggtatatgtgaccgatat
tctgatttctctgtgggccttatctctggccattgtagatgcaagtcaaatgttgaggga
gaacgctgtgaccgatgcaaggaaggatactatgacttgaatgcagaagaaccagatgga
tgccagccttgtggatgcaacaccctaggaactattcctggtggaaattcatgtgattca
gtagaaggaaactgttactgcaaacgtttcgtgatgggaaagcagtgcgaccagtgcatg
cctggattctggggtttgagcaatgacctggatggatgtcggccttgcgattgtgaccgt
ggaggatcattggataacatttgttcacctgagtcaggtcaatgtcgctgcagaccgcac
atgattggtcgccagtgcaatgaagtggagtctggcttttatttcatatctttagaccat
tacatttatgaagcagaggatgcaaattttggccccggtgtgagaactgttgaacgcctg
cacccccaggatcgaaccccatcctggacaggacctgggtttgcccacgtcccagaagga
ggatacttagagtttgacattaataatattccaatatccattgagtatgatcttttaatc
cgctatgaaccacagcttcctgaacaatgggaagaagcagtgataacagttattcgtcca
gggaaaatacctacaagcagtagatgtggtaataccatcccaagtgatgataaccagaat
gtagcattacctccaggatctcggtatatagttcttcctcgttctatatgctttgaaaaa
ggtctgaattataccataagactggagttgccacgctattctgttaactcaaatgtagaa
aatccttacacattagttgattcagtaagtaactattttttagtagtttattgacattta
tacacattgggcctgatttattaaaactctcccaacactggatcagatagacaatcataa
gagaacctgagtgattcagcaaagctggaattgacagatgtttgcaaggactttctcttc
agcatttctgcccttctgcatgaagggggcctggaatgtcagtgtgaccctcaaggctcc
ctaagtgctgtatgcgacccgaatggagggcagtgcgattgtcgcccaaatgtagttgga
agaaactgtgataaatgtgcacctggaacttatggctttggacctagtggatgcaaacct
tgcgaatgtgatcttgaaggatctgcccattccttctgtcaccctgagactggccagtgt
ccatgtatccatggtgcctatggaagacagtgtgatgcatgtttacctggctactgggga
ttcccaagctgtcagcaatgccaatgtaatggacatactgatgactgcgatgttcttact
ggagaatgcactggatgcagggatcacactgaaggttacagctgtgaaagatgcttgaat
ggctattatggagatcccagactcggttcaggtgatcactgcaggccttgcccatgccca
gatggacctggaagtgggcgtcagttcgctagtggatgttataaagaccctacaactgag
catgttgtatgtacatgtaataaaggttatatgggtgttcgttgtgaccagtgtgcatct
ggctattatggaaacccagaagaaaatggtggtgtatgtcagtcttgtaactgtaacagt
aacatagatatgtccgatccaacggcttgtgataaacaatcaggcgtctgtctaaagtgc
ctccatcacactgagggagaaaactgccaacattgtcagctgggatattatggcagtgcc
attcatcaggattgtaaaaagtgtgtctgtaattacctgggtactgaacaggagcattgc
cagggagatgtcagttgccactgtaatagaaccactggccagtgtccttgtctgaagaat
gtggttggacagagctgtgatcactgtgcaccaaatacctggaatttagccagtggaaat
ggttgtgagccatgtggttgtgatgcaggtcgttctctgggaccatcttgtaatgagttt
actggacactgtcattgtatgcctggttttggagggaggaactgcagtgaatgccaggaa
cttttttggggaagtccagatattgaatgcagagcttgtgattgtgactcaaggggtata
caaacacctcagtgtgatcgatccgatggccactgcatctgcaatgagggcgtagaagga
ttccgctgtgataaatgtgcccgaggctattctggaatcttcccaaactgtgttccatgt
cacaagtgctttgccctttgggatgtgatcatcaaggagctgtccaataggaccaaccga
ctgctggaccgtgccagtgctcttaaagtcacaggagttattgggccataccagaaaacc
attgacaaagtgcaggaaactctaaaggaaattcagaccattatctcagagaatcctgct
gttgaaccacttaaaaacattgatcaacttttttatgaggcagagaaacttaaatctgaa
gtctgggaaaaggttgaagaagtggagcagaagatagcggaaatcaaccttaatgggtca
attaagctggatgctctacaagccgatgcagacagtgtaagcaaagcactgaaggaactt
ggagaacaactagagtacatgaagatttcaaacgttcgaggagctatggacagcatcaat
aaatacttccagatgtctctagaggcagaggagaaggttaacgcctccgctgtgaaccca
gatagcattcttgaacattcagcgtctacacgacgggaagtagaagatctcatagatgaa
aaatatattgcatttaaagaaggacaagaagaacaatctcgtcttttagatgaacttgct
ggagaagtccagaatttggatctttcactgctgtctgaaaagacttgtggaacaccaatt
ggtgcttcatgtgaagtatcacagtgtggagggcttggttgtacaacagaagatggcaag
agaaaatgcggaggagatggttgtgatggtttggtgaacatagcaaacggtgcctggaaa
acagctatgaattttgataaggaaattctgagtgcaatggcagaagtagaggagctctcc
aaactggtggctgaatcaaaattgaaagcagaggaggcgaaacaaactgcccaaagtgtt
ctaaataaagccaatgcaacaaaagagaaagttgacaaaagcaatgaagacctaagaaat
ctcatcaagcaaatcagggactttttaatgcaggatggagcagatctggatagtatcgaa
gctgttgctagcgaggtgttgaaaatggagatgcccacgactcctgagcagctgcaggct
cttactgaagatatacgggaaagagtggaaagcctttctgatgtcgaaacaatccttcaa
caaagtgctggagacataagtagagcagagtctttgctggatgaagctaaaaaatcaagc
caaagtgcatcagatgttaaggctacagctgatatggtgaaagaagctctagaggaagct
ggcagagcacagagtgcagctgaaaaagctattaagcaagccgatgatgacatcaaagga
acaaatgatctgctgacttcgattgagtcagaagcagcagtctcagaagaaacattaaag
aatgccactgatcgtatgaatgaacttgaaaaaaatcttgaagatctaatgaagaaatct
acttccaactcagagtctttaggttcaattgaaaagtctgttgaagatgtaaaagcagat
gcagatgaagtgaaaaaggttctagatgatgaacttagtaataagtataaagaagttgaa
gacttgatagccaaaaaagctgaagattcttcagaggccagaaagaaagcagaacaactt
caaaaagaagcaaaggccttgttaacacaggcaaacaagaaactgaacctactaaaagac
ctagagaaatcatatgaagtcaaccagagaatattagaagagaaagcaaaacagttggtg
actctggaagaaacagtacggaaccttttacaagccatcagccaaaaagcagcagtatac
agcacatgcctgtaa
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integrated database retrieval system
