Pyxicephalus adspersus (African bullfrog): 140325540
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Entry
140325540 CDS
T11284
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
140325540 (TMC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pads02000
]
140325540 (TMC6)
03037 Cilium and associated proteins [BR:
pads03037
]
140325540 (TMC6)
Transporters [BR:
pads02000
]
Other transporters
Pores ion channels [TC:
1
]
140325540 (TMC6)
Cilium and associated proteins [BR:
pads03037
]
Other cilia and associated proteins
Stereociliary proteins
140325540 (TMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
BAM_helical
DUF2951
Motif
Other DBs
NCBI-GeneID:
140325540
NCBI-ProteinID:
XP_072259522
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Position
3:complement(5668080..5706646)
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AA seq
773 aa
AA seq
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MSVAFLVDIPEECSDECDIHNSFCSVIQDAEQEALLELQERNTGHGSQRNDNHCSATLRI
LADMPSRTIGRCKGAMLSEYYNRTVRRRQSKKRPSLYTMDRSARPSIRQMDEVADGEEEH
QRLLVMELQKTSGTQRIRLLKSFPLNLQVKRELRTMTLDINSLWKNANPCCSSITDCIGM
ATHKCWLSFLSLLCTLRPWHLALKQIGGRFGSSVLSYFLFLKTLLGFNIFMSLLCLLFIV
TPQAVHPHNTSNPRSFTSLEILTGAGYFTDTVMYNGYYSNITLNEGCSPGHNASTCPDAK
PAWLPYHIPLAYLFTIGLVFLSTCIILVYKMSCSFGDSFRVGFFSGALALKVFSSWDFKV
NRIRCVQRQKENINMQLKELLSELRTDRRPDLRKKMQTVCIHVFSWTLCLASWLGSAVAV
YVLSEHLYKDNRARMNSETDLEVEAKLLLLPSAVSLCNLLLPYLYHALGLWELLDSPILE
VYIAICRNLMLKIVILGVLCYHWLKRKANHSEYKCWETLLGQEFYRFVIMDLIFNLLDTL
FGEQLLRLIQQKRHKNKKYRTEFDIARNVLELIYGQTLAWLGVLFCPLLPVIQTLKLLLL
FYVKKASLMRNCRSPSKPWRASHMSTVFLTLLCFPSFLGASVFLSYTVWSVTPSKSCGPF
RSLNTMYEAGKLYVRQLEVTNPRLSWISWIHHYLWENTLFIYVASSVLLVIIYFHIQIVN
GQRKVINLLKEQIANEGEDKCFLIDRLHSVYNKRSRIQRGQRSVQARIAMGKE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggctttcctggtggacattccagaggagtgcagtgatgagtgcgatatacac
aattccttctgcagtgttattcaagatgccgaacaggaagctttactggagctgcaggaa
cgtaacacaggccatggatctcagagaaatgataaccactgctcggccaccttgaggatt
cttgctgacatgccaagtcgtacgattggacgctgtaagggagccatgttgtctgagtat
tacaatcgcacggtgaggaggaggcaatccaagaagcggccatctttgtacaccatggat
cgcagtgccagacccagcatacggcagatggacgaggtagctgatggagaagaggaacat
caaaggctgctggtgatggagttgcagaagacatctggaacccaaagaattcgcctgctg
aaaagtttccctttaaaccttcaggtgaaaagagagttgaggaccatgacattagatatc
aattcattgtggaagaatgccaacccttgttgcagcagcatcacagattgcatcggcatg
gccacgcacaaatgttggctgtcctttctgtccttgttgtgcacccttcggccctggcac
ctggctctcaagcagattggagggcggtttggctccagtgttctctcttatttccttttt
ctgaagactcttctgggatttaatatctttatgagccttttgtgcctcctgttcattgtc
acccctcaggctgtacatcctcacaatacctccaaccctcgttccttcactagcctggag
attctcaccggggcgggttattttactgacacggtgatgtacaatgggtactacagcaac
ataaccctgaacgaaggatgttctcctgggcacaatgcgtccacatgtcccgatgccaag
cctgcctggcttccatatcacatacctttggcgtatctgttcactataggacttgtcttc
ctcagcacctgcatcatattggtgtataagatgtcctgctcattcggtgatagtttcaga
gttgggttcttctctggagctctggctctaaaagtgtttagttcttgggactttaaagtc
aaccggattcgatgtgtgcagaggcagaaagagaatattaacatgcagctaaaggaactg
ctgagtgagctgcggactgaccggcgtcctgatctacggaagaagatgcagaccgtgtgc
atccatgtcttctcctggactctgtgtctggcaagctggctgggctccgctgtggccgtt
tatgtcctttccgagcacctgtacaaggataatcgtgcaaggatgaatagtgagacggac
ctggaggtggaagcgaagctgctattactgccatccgccgtatcgctgtgtaaccttttg
ctgccttatttgtatcacgccttggggctctgggagctcctggactctcctatactggaa
gtttacattgccatctgcaggaatcttatgttgaagatagtcatccttggcgttctgtgt
taccactggttaaaaaggaaggccaatcactcggagtataagtgctgggagacgctgctg
gggcaggaattttaccgctttgtcatcatggatctgatcttcaatctcctagacactctg
tttggagagcagctattaaggttaatccagcagaagagacacaagaataagaaatatcgc
actgagtttgacatcgctcgcaatgtcctggagcttatttatgggcagacgttggcatgg
ctcggtgttctgttctgtcctttgcttccggtcattcagacattgaaattacttctcctg
ttttatgtgaaaaaggccagtctgatgcgaaactgccgatcccctagcaagccatggcgt
gcgtcccatatgagcacggtgttcctgactctgctctgctttccgtcttttctcggggca
tctgtgttcctctcttataccgtgtggtcggtaacgccttcaaaatcctgcggccccttc
cgatcgctcaacacaatgtacgaagccggcaaactttacgtcaggcagttggaagtgacg
aaccctcgcctgagctggatcagctggatccatcactacctctgggagaatacattgttc
atatatgtggcatcttcagtcctgctagtcataatttacttccacatccagattgtaaat
ggacaaagaaaagtcatcaacttgctgaaggaacaaatcgccaacgaaggtgaagataaa
tgcttcctgattgatagactccattcagtatataataagagaagcagaattcagcgaggt
cagagatcggtacaagccaggatagctatgggaaaggaatga
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